Basic Information

Insect: Platygaster equestris
Gene Symbol: -
Assembly: GCA_030522785.1
Location: JAPYZK010001128.1:20198-24444[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.043 6.4 8.5 0.5 1 19 27 45 27 47 0.94

2 29 0.0032 0.47 12.0 4.1 1 21 65 85 65 86 0.94

3 29 0.00042 0.062 14.8 3.0 2 23 94 115 94 115 0.96

4 29 0.12 18 7.0 1.9 1 23 119 141 119 141 0.96

5 29 0.0017 0.25 12.9 2.7 2 23 148 170 147 170 0.95

6 29 3.6e-06 0.00053 21.3 0.3 1 23 178 200 178 200 0.97

7 29 0.0033 0.48 12.0 2.1 1 23 207 229 207 229 0.98

8 29 1.9 2.8e+02 3.3 0.5 3 23 237 256 236 256 0.80

9 29 0.0053 0.79 11.3 0.1 3 23 264 284 263 284 0.97

10 29 1.5e-05 0.0023 19.3 0.4 1 21 290 310 290 311 0.96

11 29 1.4 2.1e+02 3.7 0.1 2 11 386 395 385 401 0.89

12 29 0.0016 0.23 13.0 2.3 2 23 416 437 415 437 0.97

13 29 0.00096 0.14 13.7 1.4 1 23 441 463 441 463 0.98

14 29 0.0001 0.015 16.7 1.2 1 23 469 491 469 491 0.97

15 29 1.1e-05 0.0017 19.8 1.2 1 23 497 519 497 519 0.98

16 29 0.0016 0.23 13.0 3.3 1 23 528 551 528 551 0.98

17 29 1.6e-05 0.0023 19.3 0.7 2 23 558 579 557 579 0.96

18 29 1.2e-07 1.7e-05 26.0 1.9 2 23 586 607 585 607 0.97

19 29 3e-05 0.0045 18.4 2.2 1 23 613 636 613 636 0.97

20 29 0.016 2.4 9.8 0.9 1 23 682 704 682 704 0.95

21 29 4.2e-06 0.00062 21.1 1.1 1 23 710 732 710 732 0.99

22 29 8.3e-07 0.00012 23.3 0.8 1 23 738 760 738 760 0.99

23 29 3.7e-05 0.0054 18.1 0.6 2 23 767 789 766 789 0.93

24 29 0.00059 0.088 14.3 1.9 1 23 794 816 794 816 0.96

25 29 0.17 25 6.6 2.8 2 23 826 846 825 846 0.95

26 29 2.8 4.1e+02 2.8 3.2 3 23 854 873 853 873 0.91

27 29 1.5e-05 0.0022 19.4 0.9 2 23 881 902 880 902 0.97

28 29 4.5e-07 6.6e-05 24.2 1.2 1 23 908 930 908 930 0.97

29 29 4.1e-05 0.0061 18.0 0.3 1 23 936 958 936 958 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.043	6.4	8.5	0.5	1	19	27	45	27	47	0.94
2	29	0.0032	0.47	12.0	4.1	1	21	65	85	65	86	0.94
3	29	0.00042	0.062	14.8	3.0	2	23	94	115	94	115	0.96
4	29	0.12	18	7.0	1.9	1	23	119	141	119	141	0.96
5	29	0.0017	0.25	12.9	2.7	2	23	148	170	147	170	0.95
6	29	3.6e-06	0.00053	21.3	0.3	1	23	178	200	178	200	0.97
7	29	0.0033	0.48	12.0	2.1	1	23	207	229	207	229	0.98
8	29	1.9	2.8e+02	3.3	0.5	3	23	237	256	236	256	0.80
9	29	0.0053	0.79	11.3	0.1	3	23	264	284	263	284	0.97
10	29	1.5e-05	0.0023	19.3	0.4	1	21	290	310	290	311	0.96
11	29	1.4	2.1e+02	3.7	0.1	2	11	386	395	385	401	0.89
12	29	0.0016	0.23	13.0	2.3	2	23	416	437	415	437	0.97
13	29	0.00096	0.14	13.7	1.4	1	23	441	463	441	463	0.98
14	29	0.0001	0.015	16.7	1.2	1	23	469	491	469	491	0.97
15	29	1.1e-05	0.0017	19.8	1.2	1	23	497	519	497	519	0.98
16	29	0.0016	0.23	13.0	3.3	1	23	528	551	528	551	0.98
17	29	1.6e-05	0.0023	19.3	0.7	2	23	558	579	557	579	0.96
18	29	1.2e-07	1.7e-05	26.0	1.9	2	23	586	607	585	607	0.97
19	29	3e-05	0.0045	18.4	2.2	1	23	613	636	613	636	0.97
20	29	0.016	2.4	9.8	0.9	1	23	682	704	682	704	0.95
21	29	4.2e-06	0.00062	21.1	1.1	1	23	710	732	710	732	0.99
22	29	8.3e-07	0.00012	23.3	0.8	1	23	738	760	738	760	0.99
23	29	3.7e-05	0.0054	18.1	0.6	2	23	767	789	766	789	0.93
24	29	0.00059	0.088	14.3	1.9	1	23	794	816	794	816	0.96
25	29	0.17	25	6.6	2.8	2	23	826	846	825	846	0.95
26	29	2.8	4.1e+02	2.8	3.2	3	23	854	873	853	873	0.91
27	29	1.5e-05	0.0022	19.4	0.9	2	23	881	902	880	902	0.97
28	29	4.5e-07	6.6e-05	24.2	1.2	1	23	908	930	908	930	0.97
29	29	4.1e-05	0.0061	18.0	0.3	1	23	936	958	936	958	0.96

Sequence Information

Coding Sequence: ATGAGACCCCTGTACGTTTTGCAAGGGCCCGAAAATCCGGAAACCACGTCGTCGCGAGATCCACTGAAAACCGAAAAGCACACTTGCGATTCATGCGACGAAACCTTCGGCACGGAAAAGGAATTGCTACTACACAAAACCGAGCGCGTCATATTGCGCACGCGCGCATCTTTGCGCGCTTTCACGCCCAATCACGTTTGCCCGCACTGTTTCAAGCGTTTCAAAAACGGGAACCTGCTGAAAAACCACATTTGCCTGACGAAGCCGGGAGTTACGGCGTACTGCGACAGGTgcgacaaaaatttcaagaacttgcgCAGCCTGAAAAAACACGAGTCGCGCCACGACGAGGCCTACATTTGCCGTTTTTGCGGCAAATGCCTTAGCTCCGCGTTCATTCTGAAGCTCCACGAAATGCGGCACGAGCATTTGTCGAAATGCGTGTGCAAGATTTGCAACAAGACATGCCAGACGCCGGTGGCGCTGCGAATGCACTTGTCCCGCGCCCATTGCGCCGCGGAGGCCAGGTCCTTCGCGTGCGACGAGTGCGGGAAAGCTTTTCAGTCGGCCGCGAAGCTGAGGATGCATCAGAAAACTCACCAGCCCGAGCTGAAAAGGTTCAGTTGCGAGGTTTGCGGGTTCAGGACGATGTACAAGTCGTGTTTGCGGGGTCACATGGCGACGCACACGGGCGAGAGCCAGGCGCCGTGCGAGGTTTGCGGAAATTTGTTCAGTCGGCAGTACTTGCCGATTCACATGAGGCATCACACCGGTGAGAAACCGGAGATTTGCGAGGTTTGCGGGAAAGGCTTCATTTGGAGCAAGTACCTCGCCAAGCATAGGCTGATTCACACGGGCGAGAAACCGTACCAATGCGCGTACTGCGAGAAGAAGTTCACGCAGCGAGGCAGTTTGAACATTCACGTGAGGAACAATTGTCCGCAGCTGAAGGCCAAattcaaaatAGAGCCGTTCAACGATCACTCCTACACGTTGCACATCTCCGAGCAAGAACATGAGAACGAGTTGAAGATTTCTCTTTTGGGACTCGAGGAATCCGACGAACCAGTGAAGTCGAAGCACAGGAAACCCGAGGTACAGGAAAGCTCCCGGGAATTCAACTTGAAAACGTGCAAGCTCTCGGTGGAAGAGCTGAGATGCGAGGAGTGCGACCTGAGCTTCGACCATGACATCAGAAAGCACGCGAGGCACATGGTCCGGGTGCACCAGTCTGAAAAGCCTGTCGAGTGCGATgtttgcggaaattttttcaagacccAGTATCATACGAAGCTGCACAAGAGGGTTCACAACAAAAAATACGCTTGCTCGGAATGCGATTACCGGACCATCTCTCGATGCTCGCTCGAAGTCCACGTGAGAAAGCACACCAAGGATCACAAGTACAATTGCGAAGAGTGCGGGAAAGGGTTCTACGAAAAACACGCCCTACGGTATCACACACTGATTCACACCGGGGAAAGACCCTTCGTGTGCAAAATTTGTCCCAAGGCTTTCACTTGCGCGTCTAATTTAAAAGTGCATTTATCAACGCACGAAGATGCTACTGCAAAAAAGAGGTACAAGTGCGAAATGTGCAATTACCAGTCCAGTAGGCGATATCAAGTGACGAAGCACTATAAGCGCATACATTTGAGGGAATCCGATTGCACCTGCGATATTTGCGGCAAAGTTATCAGCAGTCGGGCGTATCTCAAAATCCACATAAAGATGCACACGGGTGAAAAAGACTGTGTTTGCGAGTATTGCGGAAAGGCCTTCTCCAGGAGGAGTTACTTGATTACCCACGTGCGCACGCACACCGGCGAGAAGCCGTACGCGTGCCAGGTTTGCGGCAAGTGTTACACGCAGTACGGTACCTTGACCTTGCACAAGAGGAAGGCGCATCCTGTATCGACTTATGAGTTGTCCGAAATTCTAGAGGAGGAAAGCCTCGAAAACGGTCATCTGGCGTTGTTGCGGGATtacgaggatttcgaaatggAAGATGTTTATTTCGACGAGAAAGGCAATCCAAGCATATACAAATGCGAACCATGCCAAAAGTGGTTCCGCTCTCGACAGAATTTAAACAAACACGCCGTGTCACACAGCGACGCGCGCCCGTACAAATGTGACGTTTGCCAAAAGAGCTACAAACTCCGCGAGGCGCTTAAGAAACACATTAAGATCCACTCGGGTACGAAAGAGTACAGATGCCAGTATTGCGAGCGTGCTTTCAACCAGGCCGCTAATCTCACGACTCATGTTCGTCGCCATAAACGGGATTACTTGTGCAGTTGCGACGTTTGTGGCAAGGGTTTCTACTCCAAAGCTGAACTTCGAAGTCACATAGTGGTCCGACACTCTGTACGGGAACACAAGTGCCCAATTTGCCAGAAGGTCTTCCCAAGCGTGTACGCCCTAGGCCACCACAAGACCTCCCACGACCAATACAGTCAGCGTCCCCAGTGCACGTGCGAATTTTGCGGGAagattttgacaaaaaattactACAAGTCCCACATCGCGCGTCATTTGGGCATGGGAAAAAACGCATGTCATATTTGCCATAAAGTCATGGCCAAGAAGTCGTTGAAACAGCATCTGCTATTGCATGAGAATAAAGGTAAAACGAttgtttgcgaaatttgcgGGAAAGCTTTCGCTACGCTTCAATGCCTGAAAACGCACAGCAGAACGCATACGGGGGAAAAGCCCTTCATTTGCGAAACGTGTGGGAAGGCCTTCACGCAGTCTTCCTCTTTGAAAATCCACAAGAGGTATCATACTGGGGAACGACCTTATAAGTGCGAGAAATGTGAGAAGGCATTCGTGTCCAGGGCGCTGCTCAACTCTCATGGGAAAGCACACAATTAG
Protein Sequence: MRPLYVLQGPENPETTSSRDPLKTEKHTCDSCDETFGTEKELLLHKTERVILRTRASLRAFTPNHVCPHCFKRFKNGNLLKNHICLTKPGVTAYCDRCDKNFKNLRSLKKHESRHDEAYICRFCGKCLSSAFILKLHEMRHEHLSKCVCKICNKTCQTPVALRMHLSRAHCAAEARSFACDECGKAFQSAAKLRMHQKTHQPELKRFSCEVCGFRTMYKSCLRGHMATHTGESQAPCEVCGNLFSRQYLPIHMRHHTGEKPEICEVCGKGFIWSKYLAKHRLIHTGEKPYQCAYCEKKFTQRGSLNIHVRNNCPQLKAKFKIEPFNDHSYTLHISEQEHENELKISLLGLEESDEPVKSKHRKPEVQESSREFNLKTCKLSVEELRCEECDLSFDHDIRKHARHMVRVHQSEKPVECDVCGNFFKTQYHTKLHKRVHNKKYACSECDYRTISRCSLEVHVRKHTKDHKYNCEECGKGFYEKHALRYHTLIHTGERPFVCKICPKAFTCASNLKVHLSTHEDATAKKRYKCEMCNYQSSRRYQVTKHYKRIHLRESDCTCDICGKVISSRAYLKIHIKMHTGEKDCVCEYCGKAFSRRSYLITHVRTHTGEKPYACQVCGKCYTQYGTLTLHKRKAHPVSTYELSEILEEESLENGHLALLRDYEDFEMEDVYFDEKGNPSIYKCEPCQKWFRSRQNLNKHAVSHSDARPYKCDVCQKSYKLREALKKHIKIHSGTKEYRCQYCERAFNQAANLTTHVRRHKRDYLCSCDVCGKGFYSKAELRSHIVVRHSVREHKCPICQKVFPSVYALGHHKTSHDQYSQRPQCTCEFCGKILTKNYYKSHIARHLGMGKNACHICHKVMAKKSLKQHLLLHENKGKTIVCEICGKAFATLQCLKTHSRTHTGEKPFICETCGKAFTQSSSLKIHKRYHTGERPYKCEKCEKAFVSRALLNSHGKAHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -