Basic Information

Insect: Platygaster equestris
Gene Symbol: -
Assembly: GCA_030522785.1
Location: JAPYZK010000315.1:36847-40351[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.5 1.5e+04 -2.8 0.2 19 24 2 7 1 8 0.84

2 14 0.063 1.7e+02 3.4 0.4 17 43 91 114 82 115 0.89

3 14 5.1 1.4e+04 -2.7 0.7 16 27 320 331 316 343 0.78

4 14 6.9 1.9e+04 -3.2 2.0 6 23 339 354 335 359 0.77

5 14 0.15 4e+02 2.2 0.1 16 29 380 393 374 404 0.82

6 14 0.0038 10 7.3 0.5 19 41 413 432 406 434 0.90

7 14 2.5 6.7e+03 -1.7 0.0 15 27 444 456 439 458 0.81

8 14 0.4 1.1e+03 0.8 1.4 11 26 470 485 461 499 0.82

9 14 0.012 32 5.7 2.0 16 38 504 523 490 523 0.88

10 14 0.052 1.4e+02 3.6 0.8 19 44 532 554 528 554 0.90

11 14 0.0014 3.7 8.7 0.9 11 28 566 583 560 590 0.84

12 14 0.038 1e+02 4.1 0.4 6 26 590 609 586 613 0.79

13 14 1.8e-08 4.8e-05 24.3 5.2 4 44 616 658 614 659 0.96

14 14 0.021 56 4.9 0.3 14 29 654 669 651 682 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.5	1.5e+04	-2.8	0.2	19	24	2	7	1	8	0.84
2	14	0.063	1.7e+02	3.4	0.4	17	43	91	114	82	115	0.89
3	14	5.1	1.4e+04	-2.7	0.7	16	27	320	331	316	343	0.78
4	14	6.9	1.9e+04	-3.2	2.0	6	23	339	354	335	359	0.77
5	14	0.15	4e+02	2.2	0.1	16	29	380	393	374	404	0.82
6	14	0.0038	10	7.3	0.5	19	41	413	432	406	434	0.90
7	14	2.5	6.7e+03	-1.7	0.0	15	27	444	456	439	458	0.81
8	14	0.4	1.1e+03	0.8	1.4	11	26	470	485	461	499	0.82
9	14	0.012	32	5.7	2.0	16	38	504	523	490	523	0.88
10	14	0.052	1.4e+02	3.6	0.8	19	44	532	554	528	554	0.90
11	14	0.0014	3.7	8.7	0.9	11	28	566	583	560	590	0.84
12	14	0.038	1e+02	4.1	0.4	6	26	590	609	586	613	0.79
13	14	1.8e-08	4.8e-05	24.3	5.2	4	44	616	658	614	659	0.96
14	14	0.021	56	4.9	0.3	14	29	654	669	651	682	0.78

Sequence Information

Coding Sequence: ATGTGCAGATTGTGCGGGGACACAGTGATAGACTACGTTCCAATTTTTGGGGACAtatctgaaattgttgaaaaaatcaacaaatgtTTGCCAATAAAAatcGACCCATTAGATAAACTACCTTCAAACATCTGCCAGCAATGCTTTCACAGCTTGAACATAAGTTACCAACTCCTAATGAAATCAGTCCAAGTCGACTTGAATTTGCGAATGAATCTCAACGAAGACCCTCCACAAATCctggaaaaacttgaagagcAGCAATGTCCCGTCTTGTGCCAATTCTGTGACAGAATTTTACCAGATACACAAACTTTTCACCACCACATAGAAAGCACGCATTTATCAATGCTTGACAAAGAATTACAGCctaaagaaaaatccaaaccTTTCGACGAAAACACGAATCAAACTATGGAAGCTACTTCTCCCATTTTTCTGGACGAATCAGACCCTGAAAACTTGGATGAGGCCCCAAAACTGCTGGAAACAGTTTCCAAAAGCAACATCATCCAATCACATGAACTCCCTACTCcgatatctccaaaaaaatcaaaaccaaaaaatatcCTACTAACAACTTCCCAAAAACCTGGTCCAGTGTTTGTGAAACCTATCCAACTTGTTCCTTTGAACACCAAAAATGTAGCGAATGTACCACCACAGATTAGCCCctcatccaacatcaaattgatttatttacctccaaattctggaaatcctaATCTGACTTTTCGAATCCTACCTAGCATTTCTCAACTTCCgcaacaaaatttaaagataGTACCCTTTAATAACGCCGCGATTGTTCCAAGCATTGCAAAGGTCAAGATTCCCCGAATTAAGAAAGACATCCCAACACCCACAGCAACAGCAAAGAAgccgaaaattaaaaagaaagTAGACAAAAACCTGTGTTCTTCGAATGACTTCCAACCGCAAGTTGCGTCtgtaaattatgtaagatGCGATGTTTGCAATGTCGCCCTGGAGGAAGACGAGAATTTAGAGGAACATTGTTACATTCACGAGCAAAAACCTTCTAAATGCAAACTTTGCAGAGTCGATTGCAGTTCTTTGTACGAGCTGTACATACACAAAAAAACCGAGCATGGTGCTTTTAAAAGGTTCCCTCTAAAATTTGCGTGTCGTGTGTgtggtaaatttttttctcacggATGGCAATGGGAAGTTCACGAGGAGAACAAGTGCAAGCAAAAGTTTCCTGAATTCGCTTGCAAGTATTGTAATGTGGCATTTTCGACTGATCATAAACTCAAGAGGCATTTGAGGAAACACAAACAAGAAATCTTGGACGATCCAAgtgcaaaaatatttaaatgcgTTGTATGCCCAAAAGTTTTTACGGatgaagaattttacgaaaagcACCGAAATATACACGATCCTGAAtgcttggaaaaattcaaatgcatTATCTGCGATCGTTCTTTCCGGGACCGACCGAGACTTCGGGAGCATCAATTGTCCGTCCACGAAGGTGTAAAAAACTACCAATGCGACATTTGCGGAAAGAGTTTCCATCGACGATCGAATATGAAAACTCATCGAGATTTACATTTTGGATACGACTGCGAGCATTGCAACGAgcacttcgaaaaattgaagccACTTATAACACATCTTCGACAAATCCACAAAGTAGAGCCGAGTCCAAGACTTATGGCGAGGAGACCAAAAAgagaaaattgtttcatttgTAGATTTTGTGGAAAGCAACTAGCGACTGCTTTAACTCTCAAAGATCATGAGCACATTCATACCGATGAGAAACCACACACTTGTGAAATTTGCGGCAAAtcttttcgAAGTTACACCGCACGTTGGAATCACGCTCAACGCCACCAATTAGGAAGTTTTACTTGCGAACATTgtggaaaagttttcaaCTACAAGCAAAGTTTGTCGAAGCATTTGATGATACATTTGCCTGTTGAAGAACGCAAACAtcaatgtgaaaaatgtggaaaaaaatttcttcgaggACCACACTTGAAAGTTCATATGCGCATTCACAACGCTGAACGTCCGTTCACTTGCGACATTTGCTCGTTCAGTTTTACTCAAAAAGGAGATCTGAAAAGACATCGAGCGCGACACGAGGCTAATGCAAAAAGCCTAAAACGACCAGGGAAAGATTTACCTGAAATTCAAGAAGAAATAGATATCAATGTAATTGAGTTCGTTAAATATGAAGGGGATATTGTACAAGAAATACAAATAGAAGAAGAAATGATGTAA
Protein Sequence: MCRLCGDTVIDYVPIFGDISEIVEKINKCLPIKIDPLDKLPSNICQQCFHSLNISYQLLMKSVQVDLNLRMNLNEDPPQILEKLEEQQCPVLCQFCDRILPDTQTFHHHIESTHLSMLDKELQPKEKSKPFDENTNQTMEATSPIFLDESDPENLDEAPKLLETVSKSNIIQSHELPTPISPKKSKPKNILLTTSQKPGPVFVKPIQLVPLNTKNVANVPPQISPSSNIKLIYLPPNSGNPNLTFRILPSISQLPQQNLKIVPFNNAAIVPSIAKVKIPRIKKDIPTPTATAKKPKIKKKVDKNLCSSNDFQPQVASVNYVRCDVCNVALEEDENLEEHCYIHEQKPSKCKLCRVDCSSLYELYIHKKTEHGAFKRFPLKFACRVCGKFFSHGWQWEVHEENKCKQKFPEFACKYCNVAFSTDHKLKRHLRKHKQEILDDPSAKIFKCVVCPKVFTDEEFYEKHRNIHDPECLEKFKCIICDRSFRDRPRLREHQLSVHEGVKNYQCDICGKSFHRRSNMKTHRDLHFGYDCEHCNEHFEKLKPLITHLRQIHKVEPSPRLMARRPKRENCFICRFCGKQLATALTLKDHEHIHTDEKPHTCEICGKSFRSYTARWNHAQRHQLGSFTCEHCGKVFNYKQSLSKHLMIHLPVEERKHQCEKCGKKFLRGPHLKVHMRIHNAERPFTCDICSFSFTQKGDLKRHRARHEANAKSLKRPGKDLPEIQEEIDINVIEFVKYEGDIVQEIQIEEEMM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01213527;
90% Identity: iTF_01213527;
80% Identity: iTF_01213527;