Pequ003386.1
Basic Information
- Insect
- Platygaster equestris
- Gene Symbol
- SMARCC2
- Assembly
- GCA_030522785.1
- Location
- JAPYZK010000649.1:5405-11649[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7 1.5e+04 -2.8 0.1 33 44 200 211 197 212 0.84 2 2 1.2e-14 2.1e-11 44.8 0.2 3 44 633 674 631 676 0.95
Sequence Information
- Coding Sequence
- atgttttcgttGGCCCCGAAAAAAGACGGCGGACCaaaccacaaatttttcgaatcaccgGAAATTTTGGCGCAATTGGATGCCGTTAAACAATGGCTCCTCAAAAACAGCAAAAAGtatGTGCAAACAGATCCGCCGACAAACAAATCTTTATCAACTTTGGCGATTCAACTTTTGCAATTCCAAGAAGAAAATTTAGGGAAAAATGTGACCAAGCCGCCAATGACGAGAATTCCtATGAAATGCTTCTTGGATTTTAAACCTGGAGGAGGGTTATGTCATATATTTGCTGCTGCatacaaattcaaacatgAACAAGGATGGAGAAGATTCGATTTTCCTACCGGCAAGTCTAGCTCTCGTTTGGATCGCGCCGTTGAAATGTTAATGGCAGCTGAACGTAGCCTGGTGCAAAATCGCTGTTTGAACATACCTAGCGTGTTTGTGCGTCCGGAGGTGGAAAAAGTCACCTCTGTCAAACTCAAAGAAATTGTACGTCGTCACCAGGGCACGGTCGTGGAAAACGAGGCCGAAGCCAGTCACGTGATTTATCCCCCTGTGGACCCTTCCAGTGAGGAATATGCGCGGCCGTGTTTGCGACGCGATCGCTCCATTTTGCTGCACTGGTACTATTTACCTGACAGTTACGACTCCTGGACGACCCTTGATCTTCCTTGGGATTATCCAGAAACTGTGTCCGTGGGGCCAAATTCAaaATCGGTATACAAAGTAGCAGCCGCCTGGGTTTTGGATGTTGAGCAATACAATGAATGGATGAACGAAGAAGATTACGAAGTTGACGACAATGGCCAGAAAAAAGTGCACAAATATCGATTATCCGTTGATGATTTAATGGCGCAACCATCACAGCCTCCATCATCTGCAAAGAAGCCCAAGCGAAAAAGGTCCCCGAGCCCCcctccaaaacttggaaaacgtAAAAGCTGCCGTGGACCTGCCGGAATTCAAGCTACGTCGACAACGactgttccgaaaaaatcaaaggCAGGAACTGAAGAGGAAGAAGATTTGACGCAGGGTATCGAAGATCCTCCGACAGAACCTCGTATTGTCGAGGTTGTGTCGACGCCATTAAATCAGTCTTCTTCCCAAGCAGGAAATTCGACGGGAAATAATTCGGGAATAAGTGGGAGCAAAAAACAAGACAGCGAATTGCAGCCTATTCGATCTGGAAATATGGCGGATCTCGACGAACCCGTTGAAGATAAAAATGGAGGCCAAGGAATACAAGATAGAGAAGAGCGCGACAAAAGCAACGAAAGAAGCGACGGAAACAAATGCGACGAACCCGAAGATAATGTTACCGAGCAAACGCACCACATTGTTGTTCCAAGCTATTCGGCTTGGTTCGACTACAATTCCATACACACCATCGAAAAACGAGCgttgtcggaatttttcaatggaaagaacaaatccaaaactccggaaatttACCTGGCCTACAGAAACTTCATGATCGACACTTACCGATTGAACCCCACCGAGTACATTACGTCGACTGCGTGcagGCGCAATTTGGCAGGAGACGTTTGCGCGATAATGCGAGTGCATGCGTTTTTGGAGCAGTGGGGCTTGATAAATTACCAAGTTGACGCGGAATCGCGGCCGACGCCGATGGGACCGCCACCGACGTCCCATTTCCACGTTTTGTCGGATACTCCTTCCGGTCTGGCTCCGGTGAATCCTAACCCACCCAAGACCCCACAACCCACGGCAGCGAAAACTTTGCTCGACCTCGAGAAAAAAGCCATCGCCACAAATGAAGAAAAAGCCATGACCAATCACTCGATGACTAACtttggattgaaaattgatcagTATTCTAGAAAACCCTCGgttttgaaaaacaaacaaGCCGCTGGTGCGACGCGGGACTGGACCGAACAGGAAACGCTTCTGTTGCTGGAAgGTTTGGAGTTGCACAAAGACGACTGGAACAAAGTCTGCGAACATGTTGGCTCCAGAACTCAGGATGAGTGCATTTTGCATTTCTTGAGGTTGCCCATCGAGGATCCATACCTCGAAGAAGGCGGTCCCGAAGGACTTGGACCTTTGGCCTATCAACCTGTGCCATTTTCCAAAGCCGGAAATCCTGTCATGAGCACAGTTGCGTTTTTGGCCTCGGTTGTCGATCCTAGGGTTGCAGCCAGTGCCGCAAAAGCTGCGATGGAAGAATTCGCTGCGATCAAGGATCAAGTTCCTACCGCGTTGTTGGACCAACATTTGAGGAATGTTCAAGCCAGTGCGAATGCCGATGGCAAATTCGATCCATCCGCTGGATTGGCCCAGTCTGGAATCGCCGGAACCGGACCACCAGAACCACCCGAAGATTCGGCGGCATCCACAGCAGCCAACGCAAACACAGCGGTGACATCcccgagttccgcggaaaataaaaaagacgAACAAGTTGAAAAACCCAAGGAATCGTCGACCCCAGAGGCTTCGCAAACGTCACCGGTGCCAGTTGCGAAAAAAGAGGAAACGCCAGAGACAGAGCGAGAGCAACCAGAAAAAATGGAGGTTGACAATAAAGATGATGATCAGGAGGTGAAAAGTAAAGGTGACGGAAGCGAAGAAAGTGACGGAAAAGAGAAAAAGGACAAGGTGGTTCGCGACGCCCAACTGCAGTCAGCTGCCGCGGCGGCCCTGGCGGCGGCGGCCGTCAAAGCCAAACACCTCGCGGCTGTCGAGGAGCGCAAGATAAAATCCCTGGTGGCGCTTCTCGTCGAGACccagatgaaaaaattagaaatcaaGCTACGACATTTCGAAGAACTCGAGACGACAATGGAACGCGAGCGCGAGGGCCTTGAGTACCAGCGACAGCAGCTCATCACCGAGAGACAGCAGTTCCATTTGGAGCAATTGAAGGCCGCCGAATTCCGGGCCCGGCAACAAGCCCACCAACGCTTGGCCCAAGAACAGCAACAACAGCAGCAACAGCACGGACAACATTTACCCTGGCAGGCCAGTGCTCAGCAACCGCAACAACAGCAGCAACCACCGAGTCCCCAGGCGATGCCCCAACAACCCCCGCCCCCCACGCAAGCATAA
- Protein Sequence
- MFSLAPKKDGGPNHKFFESPEILAQLDAVKQWLLKNSKKYVQTDPPTNKSLSTLAIQLLQFQEENLGKNVTKPPMTRIPMKCFLDFKPGGGLCHIFAAAYKFKHEQGWRRFDFPTGKSSSRLDRAVEMLMAAERSLVQNRCLNIPSVFVRPEVEKVTSVKLKEIVRRHQGTVVENEAEASHVIYPPVDPSSEEYARPCLRRDRSILLHWYYLPDSYDSWTTLDLPWDYPETVSVGPNSKSVYKVAAAWVLDVEQYNEWMNEEDYEVDDNGQKKVHKYRLSVDDLMAQPSQPPSSAKKPKRKRSPSPPPKLGKRKSCRGPAGIQATSTTTVPKKSKAGTEEEEDLTQGIEDPPTEPRIVEVVSTPLNQSSSQAGNSTGNNSGISGSKKQDSELQPIRSGNMADLDEPVEDKNGGQGIQDREERDKSNERSDGNKCDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPTAAKTLLDLEKKAIATNEEKAMTNHSMTNFGLKIDQYSRKPSVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPTALLDQHLRNVQASANADGKFDPSAGLAQSGIAGTGPPEPPEDSAASTAANANTAVTSPSSAENKKDEQVEKPKESSTPEASQTSPVPVAKKEETPETEREQPEKMEVDNKDDDQEVKSKGDGSEESDGKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQQHGQHLPWQASAQQPQQQQQPPSPQAMPQQPPPPTQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01473111;
- 90% Identity
- -
- 80% Identity
- -