Pequ018393.1
Basic Information
- Insect
- Platygaster equestris
- Gene Symbol
- -
- Assembly
- GCA_030522785.1
- Location
- JAPYZK010010374.1:984-8149[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-08 3.9e-05 24.3 0.0 3 40 15 52 13 56 0.91 2 2 2.5 4.9e+03 -1.6 0.1 28 35 577 585 577 588 0.79
Sequence Information
- Coding Sequence
- atggTGCGACATTACAAACGCAAACGCGACGGCTCAAACAAGGAAAAACTGAAGCAAGCTGTCCTGTCCGTCAGAAGGGATAAAATGAAGGTGCAAACTGCAGCGAAGCTTCATAATGTGCCGAGAACAACATTGCACAGATGGTTGGAATTAACAACCGAGGAAGAAGTCACGCGAGGGGTTGTCAAGTGTCCTAATTCGGGACGCTGTACGGTTTTTGGCGAGGAAGGGGAAAATTGGTTGGTGTCGTTCGTCCTTGAATTCAACCAAAGATATTTCGGATGCACGCCACGAGAAgCAAAAGATATGGGTGGAGAATGTTACGAAAACATCAACGTGTTCGAAGAAAAGTTTCTACCCGAAGCAAGGTTTAGGGAAGCAGAAGAGATTGGAAGGGTTGAAATCTTCATCCCTGATGAccacataaaaaaaaaggacgAAATTCTCGACTCACCACCTTCCAAGTCCCAAAAATCAAACATCCGCAAAACCGAACACGAAGCAGCTGCCGAAATCTTCGCCcaaatcaaagaaaaattctcaacttccaCCAACAACTCGGAAAAAATCCTCCTCCTCACTCTCTCGCCAAAGTCTTGGAGCAGAAGAAAAGTAGCCGAAGAATTCGGTGCTTCTGAACGCCAGACGCTGAAAGCGAAGCAGCTAGTCGACGCATCCGGTATTCTCACCTCCCCCAAtccaaagaagaaaaaatcccCACCAAGTGACACCGACAATTTGATCGTTGCGTTTTTCAAAGACAATGAAAACAGTCGCACCATGCCTGGAATGAAGGACTACATTTCGATTACAAAACCCGATGGATCTCGGGAACGAGTTCAAAAAAGATTGATCTTGTGCAATCtccccgaaattttccaaattttcaagaagacTCATCCTGATATCGAAACAAGTTTCTCCGCGTTTTCCCGACTCAGACCACAAAACTGCGTGCTTGCCGGCGCGAGCGGTACTCACACAATTTCTGTTTGCATCGACCACGAAAATGTTAACCTCATGTTAGAAGCTGTAAATTCCAAAGACTTGACTTGCGGAACGAACTTCCCTTTCGAAACGTTCAACGACGCCTTCAAAATGATCACATGCACCAGCGCCACTCCGGAATGTTATCTCAACGAATGTCCAAAGTGCCCCAAAGTGGAGTTTCTCAAAGATTTCCTAAAGTCGGTTCTTCTGGATCAAGACATCGAGGATATAGAGTACCAAAGCTGGGAACAAAGCGAAAGAAAAACTTTGCGCACTCTAGTTTCGGATGTAGAAGATTTCGTGGAGGATTTTTGTGATCGACTGCTTAAATTGAAAGCGCATTCTTTCACCGCCAAAGAGCAGTCGGGTTTTTTGGAACGCacgaaagaaaatttgaaagaggGCGAGTTTCTCGTGACCtgcgatttttccgaaaactattCATTCGAGGTGGAGTCCCGTCGTTGGAATGGTGACCAGATGGCGATTTTTACCGCTGTTTTTTATTacacagaaaaaaatgaaattaagcGTGGCAGTTTGGCGATTCTTTCGGATAATCTTGAACGTGACGCAGTCACCGTGGATTTGTTTGCTTGGGCGAAAGAAAATGTGCGAGAAACGGAGATTTTGTACAGTCCGGAGGAAAGTTACGGAGAAACAGAGAGTGAACTGCAGGGGCGATTTGATTGTGCGaaagaaattccggaaataggAAAATACCACTCGTTTGTTCCGATTTCTCGAACGACTCTCGAAGTTCGTAAATATTCCTTTCAGAGTGGTTatgaagtattttggaaagAAATGTGA
- Protein Sequence
- MVRHYKRKRDGSNKEKLKQAVLSVRRDKMKVQTAAKLHNVPRTTLHRWLELTTEEEVTRGVVKCPNSGRCTVFGEEGENWLVSFVLEFNQRYFGCTPREAKDMGGECYENINVFEEKFLPEARFREAEEIGRVEIFIPDDHIKKKDEILDSPPSKSQKSNIRKTEHEAAAEIFAQIKEKFSTSTNNSEKILLLTLSPKSWSRRKVAEEFGASERQTLKAKQLVDASGILTSPNPKKKKSPPSDTDNLIVAFFKDNENSRTMPGMKDYISITKPDGSRERVQKRLILCNLPEIFQIFKKTHPDIETSFSAFSRLRPQNCVLAGASGTHTISVCIDHENVNLMLEAVNSKDLTCGTNFPFETFNDAFKMITCTSATPECYLNECPKCPKVEFLKDFLKSVLLDQDIEDIEYQSWEQSERKTLRTLVSDVEDFVEDFCDRLLKLKAHSFTAKEQSGFLERTKENLKEGEFLVTCDFSENYSFEVESRRWNGDQMAIFTAVFYYTEKNEIKRGSLAILSDNLERDAVTVDLFAWAKENVRETEILYSPEESYGETESELQGRFDCAKEIPEIGKYHSFVPISRTTLEVRKYSFQSGYEVFWKEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -