Pequ007698.1
Basic Information
- Insect
- Platygaster equestris
- Gene Symbol
- -
- Assembly
- GCA_030522785.1
- Location
- JAPYZK010002213.1:4639-7234[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 2.1e+03 -0.5 0.0 28 34 9 15 8 19 0.86 2 2 4.4e-14 8.8e-11 42.4 0.1 3 39 45 81 43 85 0.93
Sequence Information
- Coding Sequence
- ATGCCGATTCTTTTATTCCAACAGATACCAAAAACGACGCTTTTTCGAGATAAAACGAAACTGATAAATCAAGGAAAATTACCAATAACTTCTTTAAGAAAAAGGAACAATGACAACGACGAATCGAAGAAAACAAGACTCGCACAAGCCGTGTCCGCGTGTTTGGATGGAAAAATGTCTCAAGCAGCCGCTGCAATAACTTACAACGTTCCGAAAACCACGATATGGAGGCGGTTGCAAAAACAAGGGAGAAAAGTTTCCTCTAAAAACGGAGAACCTGCGGAtcggaaaaaagaaaatgtcgaaaatggaaataacAAGTATTTGGATGAAGACGAGATGTTCGAACTCTGCGAGGTCCCGGCAGAAGTCTCGAAGGAAGATGTTTGTTTACCAGAAGGTGGCATTGCTGATGAgtcgattattattttcacgaCCTCAGAAGTGGACGGTAtcggtttcgaaaatgaaagagAATTAGTGGATAATCGAGATGTAGaacaaagtttcataaactGTCAAATGAATTTAGAAAGTGACAAAGTTGAAGAGGAAATaggggaaaaagaaaaaagccAAGAAGAAGACTTTAAACCTTTTTTTCCTAAGAGTTGA
- Protein Sequence
- MPILLFQQIPKTTLFRDKTKLINQGKLPITSLRKRNNDNDESKKTRLAQAVSACLDGKMSQAAAAITYNVPKTTIWRRLQKQGRKVSSKNGEPADRKKENVENGNNKYLDEDEMFELCEVPAEVSKEDVCLPEGGIADESIIIFTTSEVDGIGFENERELVDNRDVEQSFINCQMNLESDKVEEEIGEKEKSQEEDFKPFFPKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -