Ppen067641.2
Basic Information
- Insect
- Platycnemis pennipes
- Gene Symbol
- HIVEP1_1
- Assembly
- GCA_933228905.1
- Location
- CAKOGJ010001315.1:309976-328383[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0014 1 12.9 1.0 1 23 92 114 92 114 0.97 2 9 0.002 1.5 12.4 4.7 1 21 120 140 120 144 0.89 3 9 0.15 1.1e+02 6.5 0.1 2 20 419 437 418 438 0.94 4 9 1.3e-06 0.00095 22.4 1.6 1 23 1100 1122 1100 1122 0.99 5 9 0.009 6.4 10.3 7.7 1 23 1128 1152 1128 1152 0.92 6 9 2.5e-05 0.018 18.4 0.8 2 23 1744 1765 1743 1765 0.96 7 9 0.00023 0.16 15.4 2.2 1 23 1771 1795 1771 1795 0.93 8 9 0.0017 1.2 12.7 2.5 1 23 1816 1840 1816 1840 0.93 9 9 0.00022 0.16 15.4 0.2 1 23 1992 2014 1992 2014 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGGCCGTGGGTGCGGAAGGAGCGGCTGTGGACAGCAACGGCGGCGGGGACGCGTCCGGCATCCGCGGCGTCGGCGCCGTGGCTGCCGTGGCCATGGAGGCGCCCTCGGCAGACACCTCCCCGGTCGAGGCGTCCCCGCCGCCGCCCGCGTCTCCTCCCTCCACCTCCAACGACGCCTCCTCCACCACCTCCTCCTCCTCATCTTCCTCCTCCTCGTCGGAGGAGTCGGCCAAGCGGAGGGCCCAGTCGGCCGGCCTGGGCGGGCGACACGTGTGCCCATACTGCAAGCTGGCCTGCGCCAAGCCCAGCGTCCTGCAGAAGCACGTGCGTGCCCACACCAACGAGCGCCCTTATCCCTGCCGGACCTGCGGCTTCGCCTTCAAGACCAAGAGCAACCTGTACAAGCACTGCCGCTCGCGGTCGCACGCCCTCAAGGCCGAGCGGCCGTCTTCGGCCGCGGCGATCCCTGAGGACGACGCCGGCGGCGGCGGCGACGACGAGGATGTGGTGGGCAACTGCCTGTCGGGTGAGGAGGGCGAGGAGGAGGACGGGGTGGAGGAGGAGGGCGCCTCTCCACCCACGCGCGACGCGGACGGCGGCGGCAAGACGTCCCCCATGGAGGACCAAGAGTGCGCCGCCGCCGCTGCATCCGTCGTCAACTCGCGCCCCAGGACCATCTACAAGCCCAAGTTCCACACGGCGGCCCTGTACAGGAACGAGGAGGAAGGGCAGAGCCAGCAGTGCCGAGCAACGACCGAAGGAGAAGGAGGAGGTCCTTCGGCCCCAATGTCTTCCCATCGAGAGGCGCCGTCACAGCCGCCTTCCGCAGCGCCTGCTCCTTCCCAAGAGTACCTGCGGCGGCACGTGGCGCGGATCATCGACGAGAACAGAGCCATCGTAGAGGGCGGCGAGAGGTCGGCGTGGTCCAAGAAGAGGGTTTGGAGCCCGAGGGCGCTCCCCTTGTCCAACCGCGCCGGGGAGTCCCCTCCGCCGCGGGCCGTCGCCCCGGGCGTTGAGGCCTGCGCCGAATCCCGCCTAGCCCTCGCCCTCCTGCGTCCGCCCCCCGAGCAGCCGCTCAACCTGTCGAGGGGCGGCGTCGCGGCGTCCCCCGACAGCGCCCGCTGGGCCCTCTCGCGGGAAGAGGGCGTCTCGCCCCCGGTGGGGACCCGCGTCCCGGAGCCGTCGCCCTCCGCGCTCCTGCTCGCTCGCGACTCCCCGAGCGTTAGGGCCCCCGACTCACTCCCCAAGACCTGCCCCCTCTGCCGTGCCCAGTTCCGCGACGACGAAAGCCTCGAGGCCCACCGCATGTGCTACTGCGATGGCCGGGGGCCGTCCTACGCGAGGAAGGCCGCCGAGGTCGAGGACGTGGGGCGTCTGATGGGGGCCTGCCTCCCGTCTCCCGGCCCCCTCCTCGGCAACACGCCCCTCGTGGATGGCTACGGCCCCGCCGGCCTCCCCGCACCCAAGGTGGGGCCGCCCCCCAAGAAGCGGCGGACGGATTCGCTCCACTCGCCCAGGGCCCTCCGGCACGGGGTCCCGGAGTCACCTTACGACGGCGGCTGCGTGCTGCGGACCGTCGAGGACTCGCCCTCGAGCATGCCACAGGCGAGGCCCTCCAACGCGGTCCACCTGTTCGGAGGGGAGGTCCGTATCCGCGAAGGCAGCGAGACGAAGACGCTGCGGATCGAGGTGGGCGGGAGGGGCGGGAGCAATAGGGCCGGGGGTGAGGTGCTGCGGAGGGATGAGGGGGCGGGCGGCGGAGGCGGCCCGGGAGGTGCGGGTCCCGGCGGGGGCCGGGACGGAGACACGGTGGTGACCATCGCCCGCTCCGGCCTCCACTCAGGCGGAACCATCGTGCACAAGCCCAAGGGCGGCCGGCGTTCCCTCGCCCCCTCGCCCACCGGCCACTCCTCGCCCCCCTCCTCCCTCTCGCTGCCCATCGCCCCGCAGATCTCCACGCCGGACCTCGCCCCGGACCTCAGGGCCCCGTTCGGGCCCTTCCCGCCGCCGCATGAGGGCGTCCTGCTCGCCTACGACCCGCACCACCACCACGCCCACCTCCAGCCGGCCACCACGACACTGGGGCCCCACCCATCCTCCCCGTCGCCTTCCTTTCGGACAGCGCCGACCCGCCCGTCGCCGCCCCTGCCACCTCCGCCGCCCCTTACGCGCCCGGGGCCCTCTTCCGCATCCGGGGCTTCTTCCGGAGTGCTGACCATCTTCCACGGGGGCAGGGCGGTGCCGTTCGTGCCGGGGATGCCCGGCCCCCAGGGCACGCCCCACCCTCCCCCGCCGCTCCTCGTCCTGCCCTCCCGGTCGCCGAGGCCCCTGGACCTCGCCACCCCCGAGCACCACGGCGTGCCGGAGGGCAAGGACCTCCTCCACCCCAACCACGCTTTCGGGGCGGACGCCCCTTCGTCGGGGGCGAGGGGTTCGTCGCCGCAGCCGCCTCCCAGGGTGTCCCCCGCGCCCCCACAGGCCCCGAGCCCCGCCGTCTCGAACGGCGCCCGCGCCGAGAGCGACGCCGCCGGGCCCGAAGACCAGAAGAAGAGGAACCGATTCCTCCGGCCCACGTCGCTCCCCCTGAAGCCAGGCACATACCCCTTGAAGAAGCATAGTCAAGGCAACACTCCGTTGGGCATCAGCTCTACTGGGGCTTCTCTTGTTAGTCCAGAGACACCCCGACCTCGCAAGTCGTACGGGCAGCTGTATTTGAACGGCCACGCTTACACATACCTTGGTCTTAAATGCTCAACTCGACCATCATTCTGCTGTGCCCATCGTCGCCCACCCCAGCCCATGTACGTTGCCCAGGGGCCAGCCAACCCAAGACTCTCCATGTATTCCAACTGGAAGGTTTGTGAAGCTGTTACTGCGGAGCCATTTGGATTAGAGCCAGGAAAAGCAATGCGGCTGTATGATTCCAGGCACAGACCCTCTGACACATCTGTCGCACCATCACAGTCTGATGGTTCTGATTCCATGATCCTTACTCACTCGTCCTACTGGCTGCTCAAAAAGGAGAGGGATGGAATGGGGGAGAAGGAAGAAGCTACGGAAGTGAAAGAGGAAAAAGTGGATATTGAAGAAAAAGTGGAGAAGGAAAATGGAAAGCCAGTTCTCTCCCCTCTGGAAAATGAGAGGCCAAAGGAGAGTGAACAGCAGTGTTTGAAGTCGTCATCTGATGCTGAAGTGCAGAGTCAGCCTCCTCCCGCTAGGGTCAAGATTTTTGCTGGAGGGTTTGAGTCCAATGAAGAGTACATCTATGTTCGAGGAAGAGGTCGTGGTCGATATGTCTGTGAAGAATGTGGGATTAGATGTAAAAAGCCGTCAATGCTCAAGAAACACATTCGCACACATACTGATGTTCGTCCTTTCACTTGCCGGCACTGCTGCTTCAGCTTCAAGACCAAGGGAAATCTAACGAAACACATGAAATCAAAGGCTCACTTCAAGAAATGTGTGGAAATGGGAATTGTCCCTGTTCCAACTACGGTGGATGAGAGCCACATTGATGAGGAGTCCCTTGCTAAACAACAAGCCCAGAGAgcagcttctcttgctgaaggtgaatcagagactgacgatgatgacgaggatgaagatgaggaggatgaagatgatgatgaggaagatgacgaagataatgctgatgGTGCTGATTCATCAAAAGGGAAGATGGAACAGGAAGAAAGAGAAGTTGCTCGCAGCCTACTCAGTCTGTCTGAATCATTTGACCCATCAAACGGAATCGGCAGAATGCCTCCCCCTCCAGAGCCAGTTTCCTCATATGCCCCACAAAGTGGTCTCATGCCCCTCCTCTCTCGTCCACGCTCTTATCCTTACCTCTCGCACCTTCCCGATGAACCCCTCTCACCTCCCCTCCCCTCAGAAGAGAAAGCAAGAGTCATTCCTCCGGAGTCGGATGGAGGAAATGGTGAGGGCCACATTTTCCCTGTGTCATCATCATCGTCCACCATGGTCGCCGTTGCATCTGGACAGCGCTATTATTTTCCATCACGTCGGGATGCCCAGGCAGCAGAGGAGGGCGTGAATGTTGTGAAAGCGGACGGGCCAACACCCCCAAGGGTAGCCAGCCGGGACATATCTCCCACAACGGGCATGCCAATCTTTAATGCTGCAAGTGTTGACATGGCTGAGCAGGACACTAATGAAATGGAGGACGGGGTGAATGGTGGAGGTTACGGCCCTGTCGATCTCAGCACTGGCGGGATGGGTGGAAGCCTCCCATCAACCCCTGAGGGACCAAGGAGTGGTTGGAGGGCCAGGGGAGTGGACCGGGAGGAAGGCTTTCGTCTGAACTCTAGGAATATGGGACAGACAGCATTCGTGCTGGGATCCATGCTGCCCCAGTCACCTTACGGAACGCTGCCAGGAACACCGACCACTCCCGTTAGGGAGCATCCCTCCGAGATCCTGGCTCCCGTTCCCTCTGATTCTGCCGCCCTGCTGGCCTCGCTCTGCAGCACGGTCAACAAGCTGCCCCAGTCAACACTTGATGCCAGTTCTGGTGGGGGTTCGGTTGCAACGACGCCGACGGTTGATGATGGCACGCCGGCTGGTGGGACTATGCTTCAGGCGTACCTCACGGAACGGGCCCTCCAGGATGTGAGGTTGAAGAGACAGCAGAGGAGCCCATTTCATCCACTGGTGAGGGAGGACCAGGTAGAAATCGTGCCCATGACGGGCACGTGCAACGTCATCACCTCAGTTGGGTCTTGTACAATCTCCCTCCCGCCCAACATGATTTCCAAGGGTGCTCCCATATGCCCGTTGCCGAGAATCATTGACTCTCCATCGTACGAGGTGGTGAAGGCAGCTGAGGTCATCCAGGAAGTGCAAGTGAAGGCATGTGATGCGATGCCAAGGAAGGACTGGTCGGAGCCCGAGAGGGAGAACGGTGAAGTAAACGTTTACTGTGCCAGCACAGCGAGCACTGTTGCCAGGGTCATAGAGCGGCCATGTGCAGTGTCAACCAATCGTTCTAGTGCATCGCCAGTGCTCCGTCAAACTAAGACTACCACGGACGCTCAAACAGCTGGGGAGTCGAATAGCATGACACCAGTTGGGTCATCAGAAATGTTGAAATTGAGTCACGCCGTTGGACCACGTGTACCTTCTTGTTCTCCCAAGGCAGAGTTCATGCCTCCCCTTAGTGGGCCCTCTTCTAGTTATACAGGAGTAACTGAAGATGGGCGAAGTATGTGTGCCATATGTCACAAAGTGTTCAGTAAAGCAAGCCAGCTACGTCTCCATGTGAATATCCATTATTTTGAACGTCCCTTCCGCTGTGACTCTTGTGCTGTGTCTTTTCGCACCCGGGGACACCTTCAGAAACACCAACGTTCTGTCTCTCATCAGAATAAGGTCAGCATGAACTCAACGTTTGGTATGCCTACAACAGAGAATCCTCGTCCCTTCAAGTGTGGAGATTGTAAGATAGCTTTCCGAATTCATGGCCACCTTGCCAAGCATCTCCGTTCAAAAATGCACATAATGCGTCTTGAGTGTGTTGGGAAATTACCGTTTGGCACGTATGCAGAAGTGGAAAGGTCTGGGATCTCTTTGGCAGACATTGACACATCTGACTGTGAAAATTCACTCGAAAGTTTGCAGATATTGGCTCAGAAATTATACGAAAAAGATCCAACCAAACTACAGCATTGGGAGCGCACGAGAGCATTGAGTGAGTCATCTGAGGATGAGGCAATGGGATACCACAGAGATGAGTCGGGCCACGGTATGCCTGTGCCCAATGGCCCATCATTACATGGTGGTGCATTGATGAGGCCATCTGTTTTGGAACAAACTGCAAGCAGGAGAGTATTTTGTGGCAACCTTGCATCGGATTACGAAGATGCCTCTGATGGAGAAACTGTCTATCGCCGGAAAATTCACATACCAAAAGGTAGGCACCTCATGCTCCAACCTCCATTAACACGCTCCTTCATCTGTGACTTTTGTGATGCTGGTTTCACTTCAAAGCAGCTTCTACAAAATCATCTGTTGGTTCATCAACAAAGTCCTCCAGATAATTGTTTGTAA
- Protein Sequence
- MAEAVGAEGAAVDSNGGGDASGIRGVGAVAAVAMEAPSADTSPVEASPPPPASPPSTSNDASSTTSSSSSSSSSSEESAKRRAQSAGLGGRHVCPYCKLACAKPSVLQKHVRAHTNERPYPCRTCGFAFKTKSNLYKHCRSRSHALKAERPSSAAAIPEDDAGGGGDDEDVVGNCLSGEEGEEEDGVEEEGASPPTRDADGGGKTSPMEDQECAAAAASVVNSRPRTIYKPKFHTAALYRNEEEGQSQQCRATTEGEGGGPSAPMSSHREAPSQPPSAAPAPSQEYLRRHVARIIDENRAIVEGGERSAWSKKRVWSPRALPLSNRAGESPPPRAVAPGVEACAESRLALALLRPPPEQPLNLSRGGVAASPDSARWALSREEGVSPPVGTRVPEPSPSALLLARDSPSVRAPDSLPKTCPLCRAQFRDDESLEAHRMCYCDGRGPSYARKAAEVEDVGRLMGACLPSPGPLLGNTPLVDGYGPAGLPAPKVGPPPKKRRTDSLHSPRALRHGVPESPYDGGCVLRTVEDSPSSMPQARPSNAVHLFGGEVRIREGSETKTLRIEVGGRGGSNRAGGEVLRRDEGAGGGGGPGGAGPGGGRDGDTVVTIARSGLHSGGTIVHKPKGGRRSLAPSPTGHSSPPSSLSLPIAPQISTPDLAPDLRAPFGPFPPPHEGVLLAYDPHHHHAHLQPATTTLGPHPSSPSPSFRTAPTRPSPPLPPPPPLTRPGPSSASGASSGVLTIFHGGRAVPFVPGMPGPQGTPHPPPPLLVLPSRSPRPLDLATPEHHGVPEGKDLLHPNHAFGADAPSSGARGSSPQPPPRVSPAPPQAPSPAVSNGARAESDAAGPEDQKKRNRFLRPTSLPLKPGTYPLKKHSQGNTPLGISSTGASLVSPETPRPRKSYGQLYLNGHAYTYLGLKCSTRPSFCCAHRRPPQPMYVAQGPANPRLSMYSNWKVCEAVTAEPFGLEPGKAMRLYDSRHRPSDTSVAPSQSDGSDSMILTHSSYWLLKKERDGMGEKEEATEVKEEKVDIEEKVEKENGKPVLSPLENERPKESEQQCLKSSSDAEVQSQPPPARVKIFAGGFESNEEYIYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPFTCRHCCFSFKTKGNLTKHMKSKAHFKKCVEMGIVPVPTTVDESHIDEESLAKQQAQRAASLAEGESETDDDDEDEDEEDEDDDEEDDEDNADGADSSKGKMEQEEREVARSLLSLSESFDPSNGIGRMPPPPEPVSSYAPQSGLMPLLSRPRSYPYLSHLPDEPLSPPLPSEEKARVIPPESDGGNGEGHIFPVSSSSSTMVAVASGQRYYFPSRRDAQAAEEGVNVVKADGPTPPRVASRDISPTTGMPIFNAASVDMAEQDTNEMEDGVNGGGYGPVDLSTGGMGGSLPSTPEGPRSGWRARGVDREEGFRLNSRNMGQTAFVLGSMLPQSPYGTLPGTPTTPVREHPSEILAPVPSDSAALLASLCSTVNKLPQSTLDASSGGGSVATTPTVDDGTPAGGTMLQAYLTERALQDVRLKRQQRSPFHPLVREDQVEIVPMTGTCNVITSVGSCTISLPPNMISKGAPICPLPRIIDSPSYEVVKAAEVIQEVQVKACDAMPRKDWSEPERENGEVNVYCASTASTVARVIERPCAVSTNRSSASPVLRQTKTTTDAQTAGESNSMTPVGSSEMLKLSHAVGPRVPSCSPKAEFMPPLSGPSSSYTGVTEDGRSMCAICHKVFSKASQLRLHVNIHYFERPFRCDSCAVSFRTRGHLQKHQRSVSHQNKVSMNSTFGMPTTENPRPFKCGDCKIAFRIHGHLAKHLRSKMHIMRLECVGKLPFGTYAEVERSGISLADIDTSDCENSLESLQILAQKLYEKDPTKLQHWERTRALSESSEDEAMGYHRDESGHGMPVPNGPSLHGGALMRPSVLEQTASRRVFCGNLASDYEDASDGETVYRRKIHIPKGRHLMLQPPLTRSFICDFCDAGFTSKQLLQNHLLVHQQSPPDNCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -