Basic Information

Insect: Platycnemis pennipes
Gene Symbol: -
Assembly: GCA_933228905.1
Location: CAKOGJ010003753.1:85354-86796[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5e-05 0.01 19.1 0.1 1 23 2 24 2 24 0.97

2 12 1.2e-06 0.00085 22.6 1.1 3 23 72 93 70 93 0.97

3 12 8.1e-07 0.00058 23.1 0.9 1 23 181 203 181 203 0.99

4 12 0.00019 0.14 15.6 1.9 1 23 209 231 209 231 0.98

5 12 4.8e-05 0.034 17.5 0.6 1 23 236 258 236 258 0.98

6 12 3.2e-06 0.0023 21.2 0.8 1 23 264 286 264 286 0.98

7 12 1.3e-06 0.00096 22.4 0.9 1 23 292 314 292 314 0.98

8 12 2.8e-07 0.0002 24.6 1.8 1 23 320 342 320 342 0.97

9 12 0.033 24 8.6 3.1 1 20 347 366 347 368 0.93

10 12 5.4e-06 0.0039 20.5 1.4 1 23 381 403 381 403 0.98

11 12 0.017 12 9.5 1.8 1 23 409 431 409 431 0.97

12 12 3.6e-06 0.0026 21.1 0.2 1 23 438 461 438 461 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5e-05	0.01	19.1	0.1	1	23	2	24	2	24	0.97
2	12	1.2e-06	0.00085	22.6	1.1	3	23	72	93	70	93	0.97
3	12	8.1e-07	0.00058	23.1	0.9	1	23	181	203	181	203	0.99
4	12	0.00019	0.14	15.6	1.9	1	23	209	231	209	231	0.98
5	12	4.8e-05	0.034	17.5	0.6	1	23	236	258	236	258	0.98
6	12	3.2e-06	0.0023	21.2	0.8	1	23	264	286	264	286	0.98
7	12	1.3e-06	0.00096	22.4	0.9	1	23	292	314	292	314	0.98
8	12	2.8e-07	0.0002	24.6	1.8	1	23	320	342	320	342	0.97
9	12	0.033	24	8.6	3.1	1	20	347	366	347	368	0.93
10	12	5.4e-06	0.0039	20.5	1.4	1	23	381	403	381	403	0.98
11	12	0.017	12	9.5	1.8	1	23	409	431	409	431	0.97
12	12	3.6e-06	0.0026	21.1	0.2	1	23	438	461	438	461	0.97

Sequence Information

Coding Sequence: ATGTTTGTTTGCAGCGAATGTGGGGCTTCCTTTGACTCTCAGACGTCACTGTCGACGCACGCCAGGGGTCACCAGATGGTGGAAAAGACTGTGGGATCTGGTGAGGTGTGTGGGCAGAGGAACGAGGACGACCCCCAGTTTCCTCACTCAGATTGCAATGTCTTCACTCAGAAGAGTGACTTGAGCATCAGGAGGAAGAAATCATTGTTCGGTTGTGACCATTGTGGCAAGGTCTACGCCCAGAAAGACCACCTGGTAGACCACATACGTTCAATCCACCTCGAGATGCGTAACCTGGAGTGTACGGTTACTGGGAGGAGGTCGGACTACCCACATGATTTTTCGGAGTCTCACAAGGAGGAGAAGAAACGGCTCGTATACGATTGCAGCGGTTCCTCCAAGAAGGGGACGCAGTGCGCACCCGTCAACTCGCTTGACTTACAAGTGAAGCCCTACTGTTGCAGCATCTGCGCCAGAGGCTTCCAGTGCAAGTCCAAGCTCAGTTGCCACATAACCACGGTACACAGTTCTGAGAGGCGTttcaagtgcggcgtgtgcgggaaggcgtacaagatgtccacgaccctaaagacccacatgctgacgcactcgTCGGAACGCAGTCACCGCTGCCCCTTGTGCCCGAGATCCTTTCTGTTCAGGTACCAGCTCACTTCCCACATCGAGACACACAGTGGACTCACGTACGCCTGTGAGCTTTGCGGGAAGGAGTTCAACGAGTCCTCTCGGCTGCGTGGTCACAAGCGAAGGCACGCGAGCGAAAGGTCTTACAAATGTGCACAGTGCCCGAAAGCATACAAGAGTGCAAGTCacctcgccaggcattccgcgacccactcggacgagggcaagttctcttgcgagatctgcgggaggaagttcttcctgaaagactacctgaacgaccacatgaggatccacgacgggaagaggcctttccagtgtgaggtctgctccaaaatgttctccaccaagagtaacctgaggcagcacgcgactcgacaccaggagaggacgcacgagtgTCATCGGTGCCACAAACTCTTCAAGACGAAGCAGGAGGTGAAGGGGCACTTGGTGAATTACTGCTCGGAGGCGGCCAAGGAGGCCGAGAGGCCTTTCAAGTGCGAGGAATGCTCCAAGACGTTCAAGTTCAGAAGCAGTCTGTCGGAGCATGCCGCGACGCACAGTGGACAGAAGTCGCATGTCTGCAGTGTGTGCTCGAAGGCGTTTTTAACCAAGACAAGACTGGGCCTGCACCTCAGGCGACACGATGAGAAGCGGGAGGTATTCAGGTGCGGAGACTGCGGAATGACGACGGTAAACAAGTGGTACTTGAAGAGGCACATGGAGGTGGTCCACGGCGAAAACAAGAACGAAGATGGGGCGGGAGGAGGAAGAGATGTCGCGAAACAGTGTTGA
Protein Sequence: MFVCSECGASFDSQTSLSTHARGHQMVEKTVGSGEVCGQRNEDDPQFPHSDCNVFTQKSDLSIRRKKSLFGCDHCGKVYAQKDHLVDHIRSIHLEMRNLECTVTGRRSDYPHDFSESHKEEKKRLVYDCSGSSKKGTQCAPVNSLDLQVKPYCCSICARGFQCKSKLSCHITTVHSSERRFKCGVCGKAYKMSTTLKTHMLTHSSERSHRCPLCPRSFLFRYQLTSHIETHSGLTYACELCGKEFNESSRLRGHKRRHASERSYKCAQCPKAYKSASHLARHSATHSDEGKFSCEICGRKFFLKDYLNDHMRIHDGKRPFQCEVCSKMFSTKSNLRQHATRHQERTHECHRCHKLFKTKQEVKGHLVNYCSEAAKEAERPFKCEECSKTFKFRSSLSEHAATHSGQKSHVCSVCSKAFLTKTRLGLHLRRHDEKREVFRCGDCGMTTVNKWYLKRHMEVVHGENKNEDGAGGGRDVAKQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -