Basic Information

Insect: Platycnemis pennipes
Gene Symbol: -
Assembly: GCA_933228905.1
Location: CAKOGJ010002217.1:15014-51355[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0026 1.8 12.1 1.2 1 21 534 554 534 556 0.94

2 23 0.087 62 7.3 1.0 1 23 581 604 581 604 0.87

3 23 0.00059 0.42 14.1 2.9 1 23 607 630 607 630 0.97

4 23 9.6e-05 0.068 16.6 1.1 2 23 663 685 662 685 0.95

5 23 3e-05 0.022 18.1 1.3 3 23 693 714 691 714 0.94

6 23 6e-05 0.043 17.2 0.6 1 23 720 742 720 742 0.98

7 23 2.3e-06 0.0016 21.7 1.1 1 23 748 770 748 770 0.98

8 23 0.48 3.4e+02 4.9 2.1 1 23 775 798 775 798 0.96

9 23 0.034 24 8.5 2.4 1 23 804 827 804 827 0.97

10 23 7.4e-05 0.053 16.9 4.2 1 23 833 855 833 855 0.94

11 23 1.4e-05 0.01 19.2 2.4 1 23 861 883 861 883 0.98

12 23 0.8 5.7e+02 4.2 1.2 1 23 912 934 912 934 0.94

13 23 1.3e-05 0.0094 19.3 0.4 1 23 944 966 944 966 0.99

14 23 1.6e-05 0.011 19.0 0.7 1 23 972 994 972 994 0.98

15 23 0.0011 0.81 13.2 1.0 1 21 1223 1243 1223 1245 0.94

16 23 3.5e-05 0.025 17.9 2.5 1 23 1275 1297 1275 1297 0.98

17 23 0.004 2.9 11.5 3.1 1 23 1302 1325 1302 1325 0.96

18 23 4.6e-05 0.033 17.6 4.8 1 23 1331 1353 1331 1353 0.96

19 23 1.9e-06 0.0014 21.9 1.4 1 23 1359 1381 1359 1381 0.98

20 23 0.8 5.7e+02 4.2 1.2 1 23 1410 1432 1410 1432 0.94

21 23 0.00058 0.41 14.1 2.1 1 23 1442 1464 1442 1464 0.98

22 23 4.1e-06 0.0029 20.9 0.9 1 23 1470 1492 1470 1492 0.98

23 23 0.0014 1 12.9 2.3 1 23 1499 1522 1499 1522 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0026	1.8	12.1	1.2	1	21	534	554	534	556	0.94
2	23	0.087	62	7.3	1.0	1	23	581	604	581	604	0.87
3	23	0.00059	0.42	14.1	2.9	1	23	607	630	607	630	0.97
4	23	9.6e-05	0.068	16.6	1.1	2	23	663	685	662	685	0.95
5	23	3e-05	0.022	18.1	1.3	3	23	693	714	691	714	0.94
6	23	6e-05	0.043	17.2	0.6	1	23	720	742	720	742	0.98
7	23	2.3e-06	0.0016	21.7	1.1	1	23	748	770	748	770	0.98
8	23	0.48	3.4e+02	4.9	2.1	1	23	775	798	775	798	0.96
9	23	0.034	24	8.5	2.4	1	23	804	827	804	827	0.97
10	23	7.4e-05	0.053	16.9	4.2	1	23	833	855	833	855	0.94
11	23	1.4e-05	0.01	19.2	2.4	1	23	861	883	861	883	0.98
12	23	0.8	5.7e+02	4.2	1.2	1	23	912	934	912	934	0.94
13	23	1.3e-05	0.0094	19.3	0.4	1	23	944	966	944	966	0.99
14	23	1.6e-05	0.011	19.0	0.7	1	23	972	994	972	994	0.98
15	23	0.0011	0.81	13.2	1.0	1	21	1223	1243	1223	1245	0.94
16	23	3.5e-05	0.025	17.9	2.5	1	23	1275	1297	1275	1297	0.98
17	23	0.004	2.9	11.5	3.1	1	23	1302	1325	1302	1325	0.96
18	23	4.6e-05	0.033	17.6	4.8	1	23	1331	1353	1331	1353	0.96
19	23	1.9e-06	0.0014	21.9	1.4	1	23	1359	1381	1359	1381	0.98
20	23	0.8	5.7e+02	4.2	1.2	1	23	1410	1432	1410	1432	0.94
21	23	0.00058	0.41	14.1	2.1	1	23	1442	1464	1442	1464	0.98
22	23	4.1e-06	0.0029	20.9	0.9	1	23	1470	1492	1470	1492	0.98
23	23	0.0014	1	12.9	2.3	1	23	1499	1522	1499	1522	0.97

Sequence Information

Coding Sequence: ATGGAGCTAAAAGGGTCTAAGTGCAAAGGGAGCTCCAGAAGTCCCCTGCCCTCCCCCCATACAACTTATTTTTCAACTGATTCAGCAATAAAAAAATTGTTAGCATTGCCACCCTGCCCCCATCCCCATTGCCGTGTTTGTAAGCCTGTTAGGGTTGCTGTGAAGCGTGAAGAGGATGTGTCTGTCTGGGATTCGCAGGTCCAGGAGTCACACAGCCCGTCTGTCAGCAATCCCTTTGAAGTGTCACAGTCAACACAAGGCCAAGACATTGAATTTGATTTCTTCATCTCGCACTGCTACGACCACCCACAAGTAATTTCACTGGAGGCTCTACTTCCACCTCCTCCCCTTCATCTCCTTCCCCTCCCCACCAACCTCAGCTCCATACAATTCCCAGCTAGCTATGCCGGATGCAGGGGAGGAGTGGGGGGAAATGGGTGGGTAAGGGATCTAAGGTTATCTTACTCAGGTAGAGGGCAGGATGTGGGGCAGGTGGGCAGGGGATGGGTAACGAGGGATGGAGTGCCATCTCTCAAGCCATTGCAGCTCCAGGTCAGGCCACGCATCAAGCTGGAAGCTGCCTTCTTTCCGTCCTCTCCCCCTCGCTGTGGGTGGGGGTTACTCCATTCGCCCGCTCACATAAACAGCTGCGAGGCTCATGGTCTCGTAGTATCTTACGTCTGTTGTGAGGGTTATCCACCTGGGATTCAAGGCCAAGGGCTGCGCGCGAAGAATAAACCTCGAATCGTTGAGGGGGTGGGATGGAGGGGCACTCGAAGGGGCCTTGATATCCCGGAGGGCGGGCACGGGGGGCTTGGGTGTGAGGGGGATGGCTCGTGCCCACTCATAGAGTGGGAAGGGGGGACACGGAGGGCACCAACTAACCCCCACCCCCGATGTCCTCCGGGGGGGTGTCGTCCGATAGCACAAGGAAGAGATGAAAGTGCCTCCAATTGGGCTAGGATGCTGACGAGGCTTTCTGCTCCTTCTCCGACGACCGGCCACGTCCACCTGTCGCGTCTGGACTGGATGCGGCTAGACGACATGGCCGGGTGGTTTCATTCAGGCATCTACATCCTGTTTCCATGGCTGGGCGATGCATCTGCGTCTCGACTGCTCTCGAAACAGTCGAGACACAGATGTCATCAGGCATCAGCCGTTGAACACGACGGCCGAGACATAGGGGAAGGGAGGGGAGTGGAGGTGGGTTCTCCGGAGGTGAGTGTGAAGTCAGAGGGAAGGGGTGGGGGAGAGAGAGATCCAGTGTGCAGTGAGGACGAACATTGCAGCGAAATAGAGGCAGATGAAGTGAGAGTACACGAGCATAAGAATGAACCTTCTGATGACGAGGAAGGTGGCTCCGGAAGCAGAGTTAATTCGGAAGATCAAGAAGCCTTCTCCCAAAGAAGTTCTTTGGCAGGAGTCGAATCACATCCTCTTCTGAAGAAGGAGGAGGCAGACAAGGATTCATGCACCATAATCACTGCAGACTTCACGAGATCCATGAGAAGACAGACTGGCACTGCGAGCAGAGGATCCAGGAATGGTAGAAGGTTCAGTGCAAGGAGGTCAATGGACAAAGGAGTTTTGAGTGAGGCATTCGTTTGCAATGAATGCGATGCTTCCTTTGGCAGCAACACCTCCCTGTTGGCCCACACCAAGTGTCATCAGAAGAGTAGCAAAGGCACGGGAGCAGGTAAAGTGAGAGTACACAGCCAGGGAAAGAAGAGAGACACCAAGTTTCCCTGTCCACGTTGCGAAGAATCATTTTCCACGCGTGGTGTCTTGGGTTGTCATGTAAGGAAGAATCATACAGGGTTCAGCTGCGACCATTGCGGGAAGACTTGGACCCAGAAGTTACATCTGGTGAAACACATACAATCCATTCACCTCAAGATACACAAATTGGAGCGCAAGGTCCCTGGAAGGAGTCTTCTTTTGGGTGTACCTGCCGAAAGACGAAAAGAGAAGAGGGAGAAGTTGTTAATTTGCTATCATTGTAATAAGGGATTTGTGGTGAAGAGCAAACTCTTGAGACACATCAATTCGGTGCACCTGGGAATGAAGTCCTCTCATTGTACCATCTGCTCAAAGAGTTTCGCATCCAAGTATTACCTTCAGGACCACATGTCATGGGTTCACACAGAGGAGAGGCATTTCAAGTGTGATATTTGTGGGAAGGCTCTGAAGGCAGCATTTCACCTAAAGGCTCACCTACTTAGGCACCAGGAAAGGCTCCCTTTCCAATGCACCCTGTGCCCTAAGTCTTTCGTTGAAAGGCGTAACCTCAAGAACCATATGGATTCGCACAGCGGTCGCAAGCATATCTGTAAGTTTTGTGCAAAGGAGTTCATGGAGGCTGGCAAACTGCGCTTCCACATGCGGAGGATGCACTCGGACAAGAGATCACACAAATGTGAGATTTGTGCAAAGGGGTTCATGGAGGCAGACCTATTGCGCTGCCACATGCGGAGGAGTCACTTGCTCAAGAAAACGCACAAATGTGAGCAGTGTCCGAAAATGTTCAAGACTCGCACGCACCTCGAGAGGCACTCTGTGGTTCACACGGGTCTCCACAAGTACGCATGTAGTGTCTGCAGCAGGAAGTTCTATTACAGCAGGGAGCTGAATAAACACATGAAAACCCACGAGGAGGGGAAGCCTTCTGAATCCAGCCATAAAAAGATTCCCAAGAGGTTTAACAATCACATGACCCAGCAGAGGAAGAGGATGTACAAGTGTCATCCATGCAGCCAGCAGTTCCAGACAGTGGAGGAGATGAGAAAGCACGTGGATGGCCACAGCTCGGCTATGGCAGAGAAGTGGCGATTCAAGTGTGACGAGTGCTCGAAGGTATTCCTCCGCAAGGCTGCTCTCAGGCGGCACATAGCAACACACACTGGGCTGAGGGCTCATGTCTGTAAGGTTTGCTCAATGGCATTTGTGGAGAGTGGAGCCCTGAAGCGGCACATGAAAACACACGACGATAACCACTTTCATGTCTTCGTGCGAAATGTAAGACTAAAATCTTACTTCGCTAAGAGCTCAAACTCCGCACTTGATGCAAACGGGGAGGGAAATTTCCCGCCGCAAAATCCTCTTTCCAAACTTAAGGAACCGTCGTCTTTCTGCCCGCCCTCTCTTCCCGCTAATCACCTAATTGAATTTCATGATCTCCTCCAGCTGACGTTCGTGACCCGAAAGCTCCAAAGCGCAGTGGACACCAGGCTCTCCATGGGTCATCTACTGTTATTCATCTCGCACTGCTACGACCACCCACGAGTAATTTCACTGGAGGCTCTACTTCCACCTCCTCCCCTTCATCTCCTTCCCTTCCCCCCCCCCCCCACACCAACCTCAGCTCCATACAAGGGAAGGGAGGGGAGTGGAGGGGGGTTCTCGGAAGGTCTGCTCGCACAGAACCTGTCTGACAACTGCTCCCATTGGCAGAATCAAGAAGCCTTCTCCCAAACAAGTTCTTTGGCAGGAGTTGAATCTCCTCCTCTTCTGAAGGAGGGGGAGGCAGACATGGATCCATGCACCACAATCACTGCAGACTTTACGAGTTTTATGAGAAGACAGACTGGCACCGTGAGGAGAGGATCCAGGCGTGGCGGAAGGTTCAGTGCAAGGAGGTCAATGGACAAAGGAGTTTCGAGTGAGATGTTCGTTTGCAATGAATGCGGTGCTTCCTTTGGCAGCAACACCTCCCTGTTGGCCCACACCAAGTGTCATCAGAAGAGTAGCAAAGGCACGGGAGCAAGAGGTAAAGCGGCACGTCACCTGAAGCTTCACCGTCTTGTGCACTTGGAGAATCGCCCTTTTCCTTGCACCCTCTGTACTAAATCCTTCGTGAGCAATCACCTCCTCAAGTACCACATGGAATCGCACAGTGGTCGCAAGCATATCTGTGAGATTTGTACGAAGGAGTTTAAGGAAGCAGACCTATTGCGTTGCCACATGCGGAGGATGCACTTGCTAAAGAAATCGCACAAATGTGAGCAGTGTCCGAAAATGTTCAAGACTCGCACGCATCTCGAGAGGCATTCCTTGGTTCACACGGGTCTCCACAAGTACCCTTGTGGGGTCTGCAGCAGGAAGTTCTATTACAGCAGTGAGCTGAATAAACACATGAAAACCCACCAGGAGGAGAGGCATTCCGAACTGGGCCATGAAATCGTTCCAACTACAAGTGACAATCATGTGACCCAGTCCAAGAAGAGGATGTACAAGTGTCACCCATGCAGCCAGCAGTTCCAGACAGTGGAGGAGATGAGGAAGCACGTTGATGGCCACAGCTCGGCCGTGGCAGAGAAGTGGCGATTCAAGTGTGACGAGTGCTCGAGGGTATTCCTCACGAAGGATTCTCTCAGGCATCACGTAGTAACACACACTGGGCTGAGGGCTCACGTCTGTAAGATATGCTCAGTGGCATTTGTGGAGAGTGGAAACCTGAAGAGGCACATGAAAACACACGACGATAATCGTGAGGTGTTCAGTTGCAAGGAGTGCAGTATGACCACGAGGAGCAAGTACTACTTTGGGAAGCACATGAAGATTGTGCACGGCAAAGACAAGGAAGAGTTTACAGTGGGGGAGGAAGAGATGAAACAATGA
Protein Sequence: MELKGSKCKGSSRSPLPSPHTTYFSTDSAIKKLLALPPCPHPHCRVCKPVRVAVKREEDVSVWDSQVQESHSPSVSNPFEVSQSTQGQDIEFDFFISHCYDHPQVISLEALLPPPPLHLLPLPTNLSSIQFPASYAGCRGGVGGNGWVRDLRLSYSGRGQDVGQVGRGWVTRDGVPSLKPLQLQVRPRIKLEAAFFPSSPPRCGWGLLHSPAHINSCEAHGLVVSYVCCEGYPPGIQGQGLRAKNKPRIVEGVGWRGTRRGLDIPEGGHGGLGCEGDGSCPLIEWEGGTRRAPTNPHPRCPPGGCRPIAQGRDESASNWARMLTRLSAPSPTTGHVHLSRLDWMRLDDMAGWFHSGIYILFPWLGDASASRLLSKQSRHRCHQASAVEHDGRDIGEGRGVEVGSPEVSVKSEGRGGGERDPVCSEDEHCSEIEADEVRVHEHKNEPSDDEEGGSGSRVNSEDQEAFSQRSSLAGVESHPLLKKEEADKDSCTIITADFTRSMRRQTGTASRGSRNGRRFSARRSMDKGVLSEAFVCNECDASFGSNTSLLAHTKCHQKSSKGTGAGKVRVHSQGKKRDTKFPCPRCEESFSTRGVLGCHVRKNHTGFSCDHCGKTWTQKLHLVKHIQSIHLKIHKLERKVPGRSLLLGVPAERRKEKREKLLICYHCNKGFVVKSKLLRHINSVHLGMKSSHCTICSKSFASKYYLQDHMSWVHTEERHFKCDICGKALKAAFHLKAHLLRHQERLPFQCTLCPKSFVERRNLKNHMDSHSGRKHICKFCAKEFMEAGKLRFHMRRMHSDKRSHKCEICAKGFMEADLLRCHMRRSHLLKKTHKCEQCPKMFKTRTHLERHSVVHTGLHKYACSVCSRKFYYSRELNKHMKTHEEGKPSESSHKKIPKRFNNHMTQQRKRMYKCHPCSQQFQTVEEMRKHVDGHSSAMAEKWRFKCDECSKVFLRKAALRRHIATHTGLRAHVCKVCSMAFVESGALKRHMKTHDDNHFHVFVRNVRLKSYFAKSSNSALDANGEGNFPPQNPLSKLKEPSSFCPPSLPANHLIEFHDLLQLTFVTRKLQSAVDTRLSMGHLLLFISHCYDHPRVISLEALLPPPPLHLLPFPPPPTPTSAPYKGREGSGGGFSEGLLAQNLSDNCSHWQNQEAFSQTSSLAGVESPPLLKEGEADMDPCTTITADFTSFMRRQTGTVRRGSRRGGRFSARRSMDKGVSSEMFVCNECGASFGSNTSLLAHTKCHQKSSKGTGARGKAARHLKLHRLVHLENRPFPCTLCTKSFVSNHLLKYHMESHSGRKHICEICTKEFKEADLLRCHMRRMHLLKKSHKCEQCPKMFKTRTHLERHSLVHTGLHKYPCGVCSRKFYYSSELNKHMKTHQEERHSELGHEIVPTTSDNHVTQSKKRMYKCHPCSQQFQTVEEMRKHVDGHSSAVAEKWRFKCDECSRVFLTKDSLRHHVVTHTGLRAHVCKICSVAFVESGNLKRHMKTHDDNREVFSCKECSMTTRSKYYFGKHMKIVHGKDKEEFTVGEEEMKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -