Basic Information

Insect: Platycnemis pennipes
Gene Symbol: -
Assembly: GCA_933228905.1
Location: CAKOGJ010010415.1:814118-820611[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0027 31 7.6 0.2 18 39 217 235 214 242 0.83

2 14 0.069 8e+02 3.1 0.5 3 27 345 367 343 378 0.85

3 14 0.37 4.2e+03 0.8 0.6 5 29 374 397 371 405 0.84

4 14 0.054 6.3e+02 3.5 1.5 15 32 411 430 399 435 0.77

5 14 0.00071 8.3 9.5 1.7 18 41 442 462 439 463 0.90

6 14 0.0017 20 8.3 3.2 18 38 470 491 469 491 0.94

7 14 0.002 23 8.1 1.3 18 41 498 518 496 519 0.84

8 14 0.0019 22 8.1 1.1 18 38 526 547 525 547 0.92

9 14 0.0007 8.1 9.5 1.8 18 40 554 573 553 575 0.84

10 14 0.0023 27 7.8 2.6 18 41 582 602 581 603 0.84

11 14 0.0019 22 8.1 1.1 18 38 610 631 609 631 0.92

12 14 0.00048 5.6 10.0 1.8 18 40 638 657 635 659 0.83

13 14 0.00099 11 9.0 2.9 18 40 666 686 665 695 0.81

14 14 0.27 3.1e+03 1.2 1.9 3 29 680 704 679 716 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0027	31	7.6	0.2	18	39	217	235	214	242	0.83
2	14	0.069	8e+02	3.1	0.5	3	27	345	367	343	378	0.85
3	14	0.37	4.2e+03	0.8	0.6	5	29	374	397	371	405	0.84
4	14	0.054	6.3e+02	3.5	1.5	15	32	411	430	399	435	0.77
5	14	0.00071	8.3	9.5	1.7	18	41	442	462	439	463	0.90
6	14	0.0017	20	8.3	3.2	18	38	470	491	469	491	0.94
7	14	0.002	23	8.1	1.3	18	41	498	518	496	519	0.84
8	14	0.0019	22	8.1	1.1	18	38	526	547	525	547	0.92
9	14	0.0007	8.1	9.5	1.8	18	40	554	573	553	575	0.84
10	14	0.0023	27	7.8	2.6	18	41	582	602	581	603	0.84
11	14	0.0019	22	8.1	1.1	18	38	610	631	609	631	0.92
12	14	0.00048	5.6	10.0	1.8	18	40	638	657	635	659	0.83
13	14	0.00099	11	9.0	2.9	18	40	666	686	665	695	0.81
14	14	0.27	3.1e+03	1.2	1.9	3	29	680	704	679	716	0.79

Sequence Information

Coding Sequence: ATGCAATGTTTAATTCATGATGGTATTGAGTCCCGCACCCGACTGTCCGCCCGCACAGGACTCCTCGTCCCTTGGCGTCCACCACGTGACACCCTGGTGGCTACCTCCAATCAGCCGGCGAGGCATCACCCCACGGGCAAGGTACATCTAGCCTCAGCACCTTTCTGGATGCAACACACTAGGAAATGGAAGTCAGTCGTCAAGGGGGGTGGGGTCGACTGTCTGTGTCAAGAAGCTGTCTCCGAGCAAGATTCTGTGTCCAGTATGGCACCTCATACTGTCGTGGCGGAAGAATCGGCTACAGTTTCAAATCCTGCTAGTTCATCTGTAGGGACGAATGTTTCGAGCAGGCGAACTGAAACCGCAAGGAGAGGATCGGGTCGCGGCAGGAGTAGAGGTCGGGATGATAGTAGTTCGTGTTTTGGTGGGCTAAAAGTGAGGGAGAAATTCATTTGTGTGGAATGTGGGGCTTCGTTCTTCTCCAAGCTGATTCTGTCGACCCACATCAGGGCTCATCAGAGTAGGAAGGACACGTTCGCAGCCAAAGGAGGAGGACAGGGTCAGGAGAATGCGCATAGCGCCAACATTCCTCGCCCCAATCATGAAGAGGTGTTCGGCACAAGGTCTGACTTTGGCCGTGAGGGGTTCAACTGCGATCATTGCGGGAAGGATTTCTCTCGAAAGGCCCAACTGATAAGTCACATATGTTCCGTCGACCTTACGGTGTGTGTCGAGAAGAGCACTCCCCCAAGAAAGACATCTAGCAGTGAAAAAAGCTCCCGTATCTCCACCAAAAAATCCAAGGAGAAGAGGGAGAAGACGTTCATTTGTGATCGCTGCGAGCTTCTCAAGAAAGGGCAACCTCAAGCAGCACGTAATCGCAGTACACATGGGGAGAGGCGTTTCAAATGTGAGGAATGCGGTTGGGCTTCCAAGACTGCCAGTGACCTGAAAACTCACATGCTGACGCACTTGGAGAAGCGCCCTTTCCCCTGCACCCTCTGCCCGAGATCATTCCTGCTGAAGCACCAACTCTGGTCTCACATGGAGTCGCACAGTGGGCGAGATCACATCTGTGAGGTTTGTGGGAAACATTTCAGAGAGAATCTTCTACTTCAAAACCACATACGGAGACACTCACAGAGGAGATTCTTCAGGTGTCAGCAGTGTTTGAAAGATTTCAAGACAAATGGGGAGCTCACACAGCATTCGCTggtgcattcgcgcctgcgcaagtattcttgtggacagtgcgggaaaaagttcacccatagtgggagcctgagcacacacacgaggatccatggcgaaattaggctgtttgagtgtgaggtgtgccacaagaagttctctcagagtgggaacctgaacaggcacatgaggacccatgacggagtgaggccgtatgagtgtcagctctgccacaagaagttcgcccggaatgggcacctgagcagtcacatgaggagccatgacggaattaggctgtttgagtgtgaggtgtgccacaagaagttctctcagagtgggaccctgaacaggcacatgaggacccatgacggagtgaggccgtatgagtgtcagctgtgccacaagaagttcgcccggaattggctcctgagcagtcacatgaggacccatgacggagtgaggccgtatgagtgtcagctgtgccacaagaagttctcccagagtgggaacctgagcagtcacatgaggatccacgacggagtgaggccgtatgagtgtcagctgtgccacaagaagttctcccagagtgggaccctgaacaggcacatgaggacccatgacggagtgaggccgtatgagtgtcagctgtgccacaagaagttcgcccggaattggctcctgagcagtcacatgaggacccatgacggagtgaggtcgtatgagtgtcagctgtgccacaagaagttctcccagagtgggaacctgagcagtcacatgaggatccacgacggagtgaggccgtatgagtgtcagctgtgccataagaagttctcccagagtgggaacctaaaggagcacatggatcggcataaagagagaagccacgaatgtcagcaatgccgcaaactcttcaagacgaagtgggacctgaagagtcacgtggctaagcacTGTTCGAAAGAAGACATTCAGGTGCCGAATACGCCACCGAATTCGAACTCCCGGGAGAGAAAGTTTGCTCCGAAATGTTACGATAGCCAGGGCGGCCATCTTGCCAGAATCCGGGATTCGGCGAACGCGCCGGCTGAAGGCCGGCGAGAACGAACACAACAAAGAAAATTATGA
Protein Sequence: MQCLIHDGIESRTRLSARTGLLVPWRPPRDTLVATSNQPARHHPTGKVHLASAPFWMQHTRKWKSVVKGGGVDCLCQEAVSEQDSVSSMAPHTVVAEESATVSNPASSSVGTNVSSRRTETARRGSGRGRSRGRDDSSSCFGGLKVREKFICVECGASFFSKLILSTHIRAHQSRKDTFAAKGGGQGQENAHSANIPRPNHEEVFGTRSDFGREGFNCDHCGKDFSRKAQLISHICSVDLTVCVEKSTPPRKTSSSEKSSRISTKKSKEKREKTFICDRCELLKKGQPQAARNRSTHGERRFKCEECGWASKTASDLKTHMLTHLEKRPFPCTLCPRSFLLKHQLWSHMESHSGRDHICEVCGKHFRENLLLQNHIRRHSQRRFFRCQQCLKDFKTNGELTQHSLVHSRLRKYSCGQCGKKFTHSGSLSTHTRIHGEIRLFECEVCHKKFSQSGNLNRHMRTHDGVRPYECQLCHKKFARNGHLSSHMRSHDGIRLFECEVCHKKFSQSGTLNRHMRTHDGVRPYECQLCHKKFARNWLLSSHMRTHDGVRPYECQLCHKKFSQSGNLSSHMRIHDGVRPYECQLCHKKFSQSGTLNRHMRTHDGVRPYECQLCHKKFARNWLLSSHMRTHDGVRSYECQLCHKKFSQSGNLSSHMRIHDGVRPYECQLCHKKFSQSGNLKEHMDRHKERSHECQQCRKLFKTKWDLKSHVAKHCSKEDIQVPNTPPNSNSRERKFAPKCYDSQGGHLARIRDSANAPAEGRRERTQQRKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01212797;
90% Identity: iTF_01212797;
80% Identity: iTF_01212797;