Basic Information

Insect: Platycnemis pennipes
Gene Symbol: -
Assembly: GCA_933228905.1
Location: CAKOGJ010010373.1:301922-303784[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0016 19 8.3 0.2 5 41 17 53 16 55 0.85

2 18 4.9e-06 0.057 16.4 0.2 16 43 94 118 74 119 0.88

3 18 0.19 2.2e+03 1.7 2.0 13 43 149 176 142 177 0.84

4 18 0.058 6.7e+02 3.4 2.5 5 33 170 200 167 211 0.73

5 18 0.38 4.4e+03 0.8 1.0 12 29 206 223 197 236 0.68

6 18 5.5 6.4e+04 -3.0 0.6 35 41 250 256 250 260 0.73

7 18 1.2 1.4e+04 -0.9 0.5 13 28 290 305 270 316 0.71

8 18 0.0012 14 8.8 1.4 15 40 320 342 309 345 0.84

9 18 0.005 57 6.8 1.9 18 41 351 371 346 372 0.86

10 18 0.00032 3.8 10.6 1.7 18 38 379 400 374 400 0.90

11 18 0.0025 29 7.8 2.0 18 41 407 427 403 428 0.78

12 18 0.00034 3.9 10.5 1.7 18 38 435 456 430 456 0.90

13 18 0.0038 44 7.2 2.3 18 37 463 483 459 484 0.73

14 18 0.0051 59 6.8 3.6 17 40 490 510 485 512 0.76

15 18 0.016 1.8e+02 5.2 0.2 18 41 519 539 518 540 0.90

16 18 0.00068 7.9 9.6 3.3 18 41 547 567 546 568 0.92

17 18 0.0098 1.1e+02 5.8 2.3 18 41 575 595 571 596 0.74

18 18 0.012 1.4e+02 5.5 0.2 18 29 603 614 598 620 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0016	19	8.3	0.2	5	41	17	53	16	55	0.85
2	18	4.9e-06	0.057	16.4	0.2	16	43	94	118	74	119	0.88
3	18	0.19	2.2e+03	1.7	2.0	13	43	149	176	142	177	0.84
4	18	0.058	6.7e+02	3.4	2.5	5	33	170	200	167	211	0.73
5	18	0.38	4.4e+03	0.8	1.0	12	29	206	223	197	236	0.68
6	18	5.5	6.4e+04	-3.0	0.6	35	41	250	256	250	260	0.73
7	18	1.2	1.4e+04	-0.9	0.5	13	28	290	305	270	316	0.71
8	18	0.0012	14	8.8	1.4	15	40	320	342	309	345	0.84
9	18	0.005	57	6.8	1.9	18	41	351	371	346	372	0.86
10	18	0.00032	3.8	10.6	1.7	18	38	379	400	374	400	0.90
11	18	0.0025	29	7.8	2.0	18	41	407	427	403	428	0.78
12	18	0.00034	3.9	10.5	1.7	18	38	435	456	430	456	0.90
13	18	0.0038	44	7.2	2.3	18	37	463	483	459	484	0.73
14	18	0.0051	59	6.8	3.6	17	40	490	510	485	512	0.76
15	18	0.016	1.8e+02	5.2	0.2	18	41	519	539	518	540	0.90
16	18	0.00068	7.9	9.6	3.3	18	41	547	567	546	568	0.92
17	18	0.0098	1.1e+02	5.8	2.3	18	41	575	595	571	596	0.74
18	18	0.012	1.4e+02	5.5	0.2	18	29	603	614	598	620	0.81

Sequence Information

Coding Sequence: ATGAGAGGATCGGCTCGAGTCAGGAGTAAAGGGCGGAGTGGTAGTCGTTCGTATTTCAGCCGGCCAAAAATGAGGGAGAAATTCATTTGCGTTGAATGTGGGGCTTCGTTTGTTTCCAAGCTGACTCTGTCGACCCACATAAGGGCTCACCTGAGCAGTAACGAAGGCACGTGTGCTACAAACGGAGGAAGACAGGTTCAAGAGAATGAGCATGGCACCTACTTTCGCCACCCCAATCAAGAAGACGTGTTCGGCACCTCTTCTTACTTGGCCCGTAAGGGGTTCATCTGTGATCATTGCGGTACGGCTTACTCTCGGAAGACAGCACTGATAAGCCACATACGTTCCTTCCACCTTAAGGTGTGTGTCGTGGAGAGCACGGCCCACATGAAGACATTCAGCAGCCGAAAAAGCTCCCGTGCGTTAAGCGAAAAGTCTAAGGTGAAGAGGGAGACGTTCGTTTGTGATTGCTGCGGCAAGGGTTTCCTCATAAAGACCCAGCTCTTGAGGCACGTCCACTCTGTCCACCTTGGGCGGAAGCCTTTCTTTTGCAATATATGTTCCAAGAGCTTCTCAACAAAGGCATACTTAAAGGTCCACGTGATTTCGGTAcacattggagagaggcgattcaaatgtgaggaatgcggtaaggcattcaagacagccggtcacctgaagattcacctgctgacgcacTTGGAAAAGTACCCTTACCCCTGTACCCTATGTCCCAAGTCATTCCTGCTCATGTACcatctcaggtctcacatgaagtcacacagcggaccaaaacacgcatttgaggtatgtgggaaggatttcgaaaggaaagttctatttcggacgcacacacgaagtcactcagaggagagattgttcaaatgtgatcagtgttcgaaagctttcaagaaaaatggagatctcaaaatacattcgctggtgcattcgcgactgcgcaaatattcttgtggactgtgcgagaaaaagttcatcaggagtggtaacctgaaaacacacatgagggcccatgacggaaagaggctgtttgagtgtgaactgtgccagaagaagttctcccaaagtgggaacctgagatgtcacatgaggacccatgacggaaagaagccgtatgagtgtgagctgtgccacaagacgttctcccagagtgggcacctcagcagtcacatgaggacccatgacggaaagaagccgtatgagtgtgagctgtgccacaagaagttctcccagagtgggcacctgagaagtcacatgaggacccatgatggaaagaagccgtatgagtgtgagctgtgccacaagaagttctcccagagtgggcacctgagcagtcacatgaggacccatgacggaaagaagccgtatgaatgtgagctgtgccacaagaagttctcccagagagggcacctgagcagacacatgaggacccatgacggaaagaagctatacgagtgtgaactgtgccacaagaagatctctcagagttgtagcctgcgcagtcacatgaggaaccatgacggaataaggccgttcgagtgtgagcagtgtgacaagaaattctccctgagtagtaacctggcagttcacatgaggacacatgacggaatgaggccgtatgagtgtgaactgtgccacaagaagttctcccagcgtgggaacctaaagcgtcacatgaggacccatgacggaaagaagccgtatgagtgtgagctgtgccacaagaagttctcccagaatgggcacctgagaagtcacatgaggacccatgacggaaagaagccgtatgaatgtgagctgtgccacaagaagttctcccagagagggcacctgagcatcacatga
Protein Sequence: MRGSARVRSKGRSGSRSYFSRPKMREKFICVECGASFVSKLTLSTHIRAHLSSNEGTCATNGGRQVQENEHGTYFRHPNQEDVFGTSSYLARKGFICDHCGTAYSRKTALISHIRSFHLKVCVVESTAHMKTFSSRKSSRALSEKSKVKRETFVCDCCGKGFLIKTQLLRHVHSVHLGRKPFFCNICSKSFSTKAYLKVHVISVHIGERRFKCEECGKAFKTAGHLKIHLLTHLEKYPYPCTLCPKSFLLMYHLRSHMKSHSGPKHAFEVCGKDFERKVLFRTHTRSHSEERLFKCDQCSKAFKKNGDLKIHSLVHSRLRKYSCGLCEKKFIRSGNLKTHMRAHDGKRLFECELCQKKFSQSGNLRCHMRTHDGKKPYECELCHKTFSQSGHLSSHMRTHDGKKPYECELCHKKFSQSGHLRSHMRTHDGKKPYECELCHKKFSQSGHLSSHMRTHDGKKPYECELCHKKFSQRGHLSRHMRTHDGKKLYECELCHKKISQSCSLRSHMRNHDGIRPFECEQCDKKFSLSSNLAVHMRTHDGMRPYECELCHKKFSQRGNLKRHMRTHDGKKPYECELCHKKFSQNGHLRSHMRTHDGKKPYECELCHKKFSQRGHLSIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01212795;
90% Identity: iTF_01212795;
80% Identity: iTF_01212795;