Basic Information

Insect: Platycnemis pennipes
Gene Symbol: -
Assembly: GCA_933228905.1
Location: CAKOGJ010001927.1:65557-82552[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.034 3.9e+02 4.1 0.2 18 42 105 130 99 131 0.88

2 10 5.3e-07 0.0061 19.5 0.8 19 43 173 194 169 195 0.96

3 10 0.022 2.5e+02 4.8 0.9 17 40 262 282 251 284 0.75

4 10 0.0021 24 8.0 1.4 18 41 291 311 289 312 0.83

5 10 0.0053 61 6.7 0.9 18 41 319 339 316 340 0.80

6 10 0.048 5.5e+02 3.6 1.7 18 41 347 367 345 368 0.85

7 10 0.02 2.3e+02 4.9 0.5 19 39 376 393 374 396 0.76

8 10 0.01 1.2e+02 5.8 0.7 18 37 403 423 401 424 0.70

9 10 0.00022 2.6 11.1 0.8 18 41 431 451 430 452 0.91

10 10 0.00095 11 9.1 0.8 18 38 459 480 456 480 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.034	3.9e+02	4.1	0.2	18	42	105	130	99	131	0.88
2	10	5.3e-07	0.0061	19.5	0.8	19	43	173	194	169	195	0.96
3	10	0.022	2.5e+02	4.8	0.9	17	40	262	282	251	284	0.75
4	10	0.0021	24	8.0	1.4	18	41	291	311	289	312	0.83
5	10	0.0053	61	6.7	0.9	18	41	319	339	316	340	0.80
6	10	0.048	5.5e+02	3.6	1.7	18	41	347	367	345	368	0.85
7	10	0.02	2.3e+02	4.9	0.5	19	39	376	393	374	396	0.76
8	10	0.01	1.2e+02	5.8	0.7	18	37	403	423	401	424	0.70
9	10	0.00022	2.6	11.1	0.8	18	41	431	451	430	452	0.91
10	10	0.00095	11	9.1	0.8	18	38	459	480	456	480	0.78

Sequence Information

Coding Sequence: ATGGTGTTGTGTACTGGCCTCCCATCCCGAAGGCCCGGGTTCGATTCCCGGCAGTGGCGGATTTTTCAGTGGAAAACCGGCCAAGATACTGACTTCGAGCAGGATGACATAGCCAGATCCCTCATACCCCCATCAAGACAAGTCGTGGCGGAAGAGTCGGATACACTTTCAAACCCTGCGAGTGCATCTGGAGGGACAGATGCTTCTAGGAGGCGACCTAAAATTTCAATGAGGGAATCGGTTTGTGGCAGGAGTAGAGGTCGGGGTGGTAGTCGTTCGTGTTTAGGTCAGCGAAAAGTGAGGGAGCAATTCATTTGTGTTGAATGTGGGGCTTCTTTCGTTTCCAAGCTGAATCTGTCGACCCACATAAGGGCTCACCTGAGCAGGAACCAGAACACATCTGCCGCTAAGGGAGGAGGACTGGGTCAGGAGGATGATCCTGGCACCTACTTACCCCTCCCCAATTATGAAGAGTTGTCTGGCACTAGTCGTGACTTGGGGCTTCAGGGGTTCCTCTGTGATCATTGTGGTAAGGAGTACTCTCGGAAGACCGAACTGATACGCCACATACGTTCCGTTCACCTTAAGGTGTGTGTCGTGGAGAGCACGGCCCCCAGGAAGACATTCAGCAGCCAAAAGAGCTCCCGTGCCTTCACCGAGAGATTCAGAGGAGAGATTGTTCACTCAGAGGGGGGATTGTTCAAATGTGAACGGTGTTTGAAAGCTTTCAAAACAAATGGAGAGCTCAGTCGACATTCGCTTGGTCATTCGCGTCTGCGCAATTATTCTtgtggagtttgcggtaagaagttctcccagagttggcacctgagaggtcatatgaggacccatgacggaatgaggccatttgagtgtgagaaatgtcacaagaagttctccttgagtgcccacctgagcaggcacttgaggactcatgacggaaagaggccgtttgagtgtgagaaatgtcacaagaagttctcccagagtgggcacctgaaagatcatatgagaacccatgacggaatgaggccgtttgagtgtgagcaatgtcacaaaaagttctccctgaatgtgcaccttagaaggcacatgaggactcatgacggagtgaggccgtttgactgtgacctgtgccacaagaagttctcccagagtgggcacctgagagatcatatgaggatccatgagggagtgaggccgtttgagtgtgggttgtgccacaaaaagttctccctgaatgggtacctgaccaggcacatgaagactcatgacggaatccggccgtttgaatgtgagctgtgccacaagacgttctcccagagtgggaacctgagagatcatatgaggacccatgacggaaagaggccatttgagtgtgagctgtgccagaagacattctcccgccgtgggcaccttagcagacacatgaggtcgcatgacggaatgaagccgttaaGCAGTCGAGAGGACGTGACACGGGCGGAAGTAAAAAGTACGCGAGGAACGTCGAAAGTAAAGTTGACGAGACGTACACGTCGTCAAAATAGATTCTTGGTAGGAATCGTCGGCGGAGCAAAGCTGATTCCATTGCAGAGTCCCGAGAATAAGACTTCACAAAGCACGGAGCTAGACGGAGGAGAACACCGCACGGGAAGGGGCGCCACGGCCCGATGTCGCGGAGAGAGCAAGTCGCAAGAAGCTCCCCCCCCCCCCCCCGTGGTTCCCTTCCCAAACCTCAGCCTAACCAAGGTCAACCGTGACCCACCTCCCATCGCGACTCCCTACCGAGCGCTACCCTTGCAACCACTCACCCGTGTAGTTTTTCTACCTGTGTAG
Protein Sequence: MVLCTGLPSRRPGFDSRQWRIFQWKTGQDTDFEQDDIARSLIPPSRQVVAEESDTLSNPASASGGTDASRRRPKISMRESVCGRSRGRGGSRSCLGQRKVREQFICVECGASFVSKLNLSTHIRAHLSRNQNTSAAKGGGLGQEDDPGTYLPLPNYEELSGTSRDLGLQGFLCDHCGKEYSRKTELIRHIRSVHLKVCVVESTAPRKTFSSQKSSRAFTERFRGEIVHSEGGLFKCERCLKAFKTNGELSRHSLGHSRLRNYSCGVCGKKFSQSWHLRGHMRTHDGMRPFECEKCHKKFSLSAHLSRHLRTHDGKRPFECEKCHKKFSQSGHLKDHMRTHDGMRPFECEQCHKKFSLNVHLRRHMRTHDGVRPFDCDLCHKKFSQSGHLRDHMRIHEGVRPFECGLCHKKFSLNGYLTRHMKTHDGIRPFECELCHKTFSQSGNLRDHMRTHDGKRPFECELCQKTFSRRGHLSRHMRSHDGMKPLSSREDVTRAEVKSTRGTSKVKLTRRTRRQNRFLVGIVGGAKLIPLQSPENKTSQSTELDGGEHRTGRGATARCRGESKSQEAPPPPPVVPFPNLSLTKVNRDPPPIATPYRALPLQPLTRVVFLPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01212804;
90% Identity: iTF_01212804;
80% Identity: iTF_01212804;