Ppen151299.1
Basic Information
- Insect
- Platycnemis pennipes
- Gene Symbol
- -
- Assembly
- GCA_933228905.1
- Location
- CAKOGJ010010386.1:2662772-2664316[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0031 36 7.4 0.5 15 42 37 65 23 65 0.89 2 14 0.0011 13 8.9 2.9 14 43 103 129 98 130 0.84 3 14 0.063 7.3e+02 3.3 0.8 13 41 173 198 168 200 0.82 4 14 0.067 7.7e+02 3.2 1.7 5 31 194 219 190 228 0.84 5 14 0.00016 1.9 11.5 2.9 13 38 229 255 219 255 0.85 6 14 0.0009 10 9.2 0.4 18 38 262 283 258 283 0.78 7 14 0.0017 20 8.3 2.0 18 38 290 311 286 311 0.92 8 14 0.0019 22 8.1 1.2 18 38 318 335 316 344 0.76 9 14 0.0047 54 6.9 4.8 17 41 345 366 335 367 0.89 10 14 0.0017 20 8.3 1.3 18 38 374 391 373 400 0.75 11 14 9.6e-05 1.1 12.3 5.0 17 41 401 422 391 423 0.89 12 14 0.0017 20 8.3 1.3 18 38 430 447 429 456 0.75 13 14 9.6e-05 1.1 12.3 5.0 17 41 457 478 447 479 0.89 14 14 0.016 1.9e+02 5.1 1.9 18 33 486 498 485 508 0.74
Sequence Information
- Coding Sequence
- ATGGATGCTTCGAAGAGGGGAACTGAAACTGCAATGAGTGGCTCGGGTCGAAGCAGGAGTATAGGTCAGGGTGGTAGTAGTTCGTGTTTTGGTCGGCGAATAGTAAGGGAGAAATTCATTTGTGTTGAATGTGGGGCTACGTACGTATCGAAGCTGACTCTGTCGTCACACGTCAGGGCTCACCTGAGCAGGAACGAAGACATAGGTTCTGCGAAGGGAAGAGAACAGGCTCAGGAGAACGAGCATGGTACCAGCTTTCTTCAAATTAAGTATGACGAGGTGATCGGCGCAGGTTGTGACTTGAGCCGTGAGAGGTTCATCTGCGATCATTGCGGGAAGGCTTTCACTCGGAAGTACCAAATGATAAGTCACATGTGTTCCGTTCACCTAAACGAATTCGACGTGGAGAGCACGGCCGGTGAGTTATGCGGAAAGGGTTCCAAGAGAGGCAGTGTCCTGAAAGTTCAAATGCAAAAGGACTTGGAGAAGAGCCCTTTACCCTGCACCCGCTGCCCGAGATCATTCAACTACACCTGTGATGTTTGTGCGAAAGATTTCAAGGGGAAACCCAAACTCCGGAAACACATACAGAGGcactcagatgagagattgttcaagtgtcaagagtgctcgaaagctttcaagacacatggcggactgaaacagcattcgctggtgcactcgcgcctcctcaagtattcttgcgaagtgtgcgggaagaagttctcccggagtgggcatctgagcagtcatatgataacccatgacggaaagaagccgtttgagtgtgagctgtgccacaagaagttctctaggcgtggggatctgaccattcacatgaggacccatgacggaaagaggccgtttgaatgtaagctgtgccacaaaatgttctatcggagtgggcacctgagcagtcacatgaggacccatgacggaaagaggccgtttgagtgtgagctgtgccacaagaagttctcccagagtgggaccttgagcacacacatggggacccatgatggaaatagggcgtttgaatgtgagcggtgccacaagaagttctcccagagttcgtacctgagaagacacatgaggacccatgacggaatgaggccgtatgagtgtcagctgtgccacaagaagttctcccagagtgggaccttgagcacacacatggggacccatgatggaaatagggcgtttgaatgtgagcggtgccacaagaagttctcccagagttcgaacctgagaagacacatgaggacccatgacggaatgaggccgtatgagtgtcagctgtgccacaagaagttcTCCCAGAGTGGGACCTTGAGCACACACATGGGGACCCATGATGGAAATAGGGCGTTTGAATGTGAGCGGTGCCACAAGAAGTTCTCCCAGAGTTCGAACCTGAGAAGACACATGAGGACCCATGACGGAATGAGGCCGTATGAGTGTCAGCTGTGCCACAAGAAGTTCTCCCAGAGTGGACACCTCAGAATACACATGAGGAACCATTACAATGAGGCCGTTCGAGTGTGA
- Protein Sequence
- MDASKRGTETAMSGSGRSRSIGQGGSSSCFGRRIVREKFICVECGATYVSKLTLSSHVRAHLSRNEDIGSAKGREQAQENEHGTSFLQIKYDEVIGAGCDLSRERFICDHCGKAFTRKYQMISHMCSVHLNEFDVESTAGELCGKGSKRGSVLKVQMQKDLEKSPLPCTRCPRSFNYTCDVCAKDFKGKPKLRKHIQRHSDERLFKCQECSKAFKTHGGLKQHSLVHSRLLKYSCEVCGKKFSRSGHLSSHMITHDGKKPFECELCHKKFSRRGDLTIHMRTHDGKRPFECKLCHKMFYRSGHLSSHMRTHDGKRPFECELCHKKFSQSGTLSTHMGTHDGNRAFECERCHKKFSQSSYLRRHMRTHDGMRPYECQLCHKKFSQSGTLSTHMGTHDGNRAFECERCHKKFSQSSNLRRHMRTHDGMRPYECQLCHKKFSQSGTLSTHMGTHDGNRAFECERCHKKFSQSSNLRRHMRTHDGMRPYECQLCHKKFSQSGHLRIHMRNHYNEAVRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01212800;
- 90% Identity
- iTF_01212800;
- 80% Identity
- iTF_01212800;