Ppen100944.1
Basic Information
- Insect
- Platycnemis pennipes
- Gene Symbol
- Smarca1
- Assembly
- GCA_933228905.1
- Location
- CAKOGJ010002592.1:98336-105453[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-06 0.015 18.3 0.0 3 41 24 63 23 63 0.95 2 3 0.00059 7.3 9.7 0.0 3 21 126 145 124 150 0.90 3 3 6.6 8.3e+04 -3.2 0.0 30 44 169 183 168 184 0.77
Sequence Information
- Coding Sequence
- ATGTGCGAGAAAAATATTAAGCCGAATGTCGTGCGGGTCGCCTACATTCGCCAGATTCCCGGATTCACCAATTGGACCAAACGAGATTTCAATCAGTTTATAAAAGCTAATGAAAAATATGGTCGTGATGATATTGAAAATATTGCAAAAGAAGTGGAAGGCAAGAGCCCAGATGAAGTCATGGAATACAGTTCTGTGTTCTGGGAGCGCTGCCATGAACTTCAGGACATTGATAGGATAATGGCCCAAATTGAACGTGGAGAGGCAAAAATCCAGAGGCGGGCTAGTATCAAAAAGGCTCTTGATGCCAAGATGGCCAGATATCGTGCACCATTCCACCAGCTTCGAATTGCATATGGCACCAACAAAGGAAAAAATTACACAGAGGAGGAGGACCGATTTCTTGTGTGTATGCTTCACAAGTTAGGTTTTGACAAGGAGAATGTGTATGAAGAGCTTCGAGCTGCTGTTAGGTCTGCTCCACAGTTCAGATTTGACTGGTTCCTGAAATCGCGCACAGCTATGGAACTACAGAGGCGTTGCAATACATTGATCACTCTGATTGAGAGAGAGAACCAAGAGTTGGAAGAGAAAGAACGTCAGGAAAAGAAGAAGAGGGGTCCAAAAGGAGGTGGGACGCCAGCAGGGGGCGTTGGAATGGGTGGCGGTATGGGAGGCATTGGTGTGGGTGGCACAGGCAAGAGGAGGGGAGAGAATGCTACACCAGACAGTGGTAGGGGACGCAAGAAGAAGCGGACCATGGACAAATGA
- Protein Sequence
- MCEKNIKPNVVRVAYIRQIPGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKSPDEVMEYSSVFWERCHELQDIDRIMAQIERGEAKIQRRASIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFLKSRTAMELQRRCNTLITLIERENQELEEKERQEKKKRGPKGGGTPAGGVGMGGGMGGIGVGGTGKRRGENATPDSGRGRKKKRTMDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -