Ppen032865.1
Basic Information
- Insect
- Platycnemis pennipes
- Gene Symbol
- -
- Assembly
- GCA_933228905.1
- Location
- CAKOGJ010000547.1:10995-16000[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 0.00047 22.8 0.0 1 37 13 48 13 56 0.92 2 2 0.53 2.2e+03 1.4 0.0 14 26 135 146 131 147 0.88
Sequence Information
- Coding Sequence
- ATGGGGAAGTACCGGCGAAAAACGGAACAGACATTGACAGAGGAGGATATGAGAATGGCACTGAAAGCTTTCAGAGAGGGAAGAAGCATGAGGCGTTCTGCCGAACTTTTCAATGTTCCCCGTACTTGCCTCTATCGTAGGATAGTAGCGGATACGGAAAAATTGAAGACAAGAGGGGGGCAAAATGTCTTCTCAGTGGAAGAAGAGGAAGCATTAATTAGAATAATTCTTAGGTTATGTGAAATTGGGTTCGGATTGACAAGAGATGATGTCATGAAGGTGGCATATGAATTTTCCATTGAAAACAACATAAAAAACAATTTCTGTGCGTTAAAAAAACGAGCAGGCAAGGATTGGTTCTTGAATTTTATATCTAGACATCCTTTAAGTCTTCGAAAACCCGAAGGTTTGTCAGTGGCTCGAGCTgggaaaaaGTTCCATAAGGAATGGGAGGATGGATTTCCGTTGGGATCTAAAATTTTTATAAAGATGACTAAATTTAATTTTGGTCGGCTTTTTCGAAATGCATGGAGCAAAGCCGCAACAATCGGCAACGCTGAAAATGGATTCCGATCAACAGGAATATTCCCTCTGAATCCGGGTATCCTGACGGAGTTAGATCTTCATCCTTCTAATCTCGGAAGCTCACACGCCCCAGAAGAAGCATCAACTCCTTTTTCGACAAATTCATCTTCCGATCAAAAATTAACTGCCAGTCCCTATGAAGAAAGCCAATCCTCGACATCAACATCTGAGGAATTGTCAAATACTTTGGCAACGTTTTTTTTCGTCTCTAATTTCTCGGCATCGGTGGACGTGACACTTCGATTGAGGCGACGAGACAGAACTCACGAAAATCACTTTCCCTGCTCCGCCCGCTCTTCTTTTCGGCTCCCTACCCTCCCCATACCTCCCTCTCGCTCCCCTTCCACACCGCCCCCTCCCCCACCTCCACAGCCTTAG
- Protein Sequence
- MGKYRRKTEQTLTEEDMRMALKAFREGRSMRRSAELFNVPRTCLYRRIVADTEKLKTRGGQNVFSVEEEEALIRIILRLCEIGFGLTRDDVMKVAYEFSIENNIKNNFCALKKRAGKDWFLNFISRHPLSLRKPEGLSVARAGKKFHKEWEDGFPLGSKIFIKMTKFNFGRLFRNAWSKAATIGNAENGFRSTGIFPLNPGILTELDLHPSNLGSSHAPEEASTPFSTNSSSDQKLTASPYEESQSSTSTSEELSNTLATFFFVSNFSASVDVTLRLRRRDRTHENHFPCSARSSFRLPTLPIPPSRSPSTPPPPPPPQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01212633;
- 90% Identity
- iTF_01212629;
- 80% Identity
- -