Ppen134346.1
Basic Information
- Insect
- Platycnemis pennipes
- Gene Symbol
- retn
- Assembly
- GCA_933228905.1
- Location
- CAKOGJ010006306.1:3133-9992[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-12 1.7e-07 34.5 0.0 28 80 3 53 1 58 0.91 2 2 1.3 9.8e+04 -3.2 0.0 53 67 161 175 156 187 0.72
Sequence Information
- Coding Sequence
- ATGGCCAAGCAGGTACTTGACCTCTACGAACTATATAACTTGGTGATCGCGCGTGGAGGTCTCGTGGATGTGATCAACAAGAAACTCTGGCAGGAGATCATCAAGGGCCTCCACCTGCCCTCTTCCATCACTTCCGCTGCCTTCACGCTTCGCACGCATCGCCAGGTTTTTATGCAATTGGGATTTCTCTCCCTCTGCTTACCGAAGCCGAAGAAGGAAGGCCAGGCAGAGGTTCCCCCACGATTTAATGCACCCAGGAGGTGGGAATGGTGGGTGCAGTTATTCCTCGACGCGGCACTGCCCGTGCATCATCGCTCTAAGGGCCGGCACCCACGCGCGCGGGCCGTGGGCGACGCCTCTCGGCGGGGCCGCGCCGCGAGGATTCAAAGCGGAGAAGTTCCCGGGCAAGGGCGGCGCTTGCCTCGCTTGGCCGCGCCACCATTCAGGAGGGAGTGGAGGGGAGGTGAATGGGCGAGGCCCCGAATTTGGGCACGCGTTGGCAATAAAATATACTGCCCGAACGGGCCTCCCTCTCCCATCCACCAAAAAGAAACCAATTATAACGCCCTGCCCTATCGGGGATGGATATCGTTCCTTTTTCCGCTTGTCGATATTTTCTTTAACTCATCCAACTCTCACTCTCCCATGACCCGTATCAGTCCTCCCTCTCCGGTACTCGCTTGTCCTCCTTCCCTGATTCCCCCTCACGCCCCACCCACGCATGCAGCGTGCACGAAGGGTGGAAGGAAGGCGGAGGAGGATGAGTGGGGTAGGGGGCGGTGTCCGGGGTGGGAGGGTACACCTGTGAGTGTCCGCCTGCCGTGGAATATGGGGACGTGCCTTTTCCCCTCCGCGCGAGTCATGGGGAGGGGTGAGGCAGGGTGTGAAACAAAAGAAAATGCCCCGCGCCCCCACCCGGACTCTTTAAAAGTTCCGTCGCCCCCTTCCCTCTTCCCCATTCCCTCTCCCACCTCCCCTCTCCCCCCTTCCCTCCCGCTCTCGCACGCTCGCGGGAGACTCCTATTTCTCAAGCACGGTTCTTCTCCCTCTATTTCTCTCCTGCTTTTCCCCACCCTTCCCCCTTCCGACTCGTCCATTCCTTTCCCTCTCCCTCCATCAAGTTTCCTCTCTCCCTCCTGCATCAACTTTCTGCACCTCTCTTTGTCTTGCCATTCTCCTCTTCATTTTCTCCAGATCCATCCCTCGCCGCTTCGTTTCAACCCTTCATGGTTTATACCCGAAATATCAAACTTAGTGTGGTCTGGAAGGCGAGAGGCGATTTTCCTTCGTTTATCTTCGACCCTGTCTCCTTTCTCCCCTCATCATCCCTTCCTCTGTTGTCCGGGATGTTTTCGTTCGTCACCTCTCCTCTCCATCTCCCAGGCCATTTCTCGTTTCTCGCCCTCTTCGTTTTTCACCTCTCTTTCCCTTCCTTCACTTTCCCCTCACCATCCAGTCAATCCCTTATTATTCCTTCTTCTTTTCTTCTCTTCCCTCCCTTCCCTTCATCGCATCGCCTTCTGGGATTTGATAGCGGCGTGTCGAAGGGAGAAAGCAATTTATGCCCATGACAGCTAA
- Protein Sequence
- MAKQVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHRQVFMQLGFLSLCLPKPKKEGQAEVPPRFNAPRRWEWWVQLFLDAALPVHHRSKGRHPRARAVGDASRRGRAARIQSGEVPGQGRRLPRLAAPPFRREWRGGEWARPRIWARVGNKIYCPNGPPSPIHQKETNYNALPYRGWISFLFPLVDIFFNSSNSHSPMTRISPPSPVLACPPSLIPPHAPPTHAACTKGGRKAEEDEWGRGRCPGWEGTPVSVRLPWNMGTCLFPSARVMGRGEAGCETKENAPRPHPDSLKVPSPPSLFPIPSPTSPLPPSLPLSHARGRLLFLKHGSSPSISLLLFPTLPPSDSSIPFPLPPSSFLSPSCINFLHLSLSCHSPLHFLQIHPSPLRFNPSWFIPEISNLVWSGRREAIFLRLSSTLSPFSPHHPFLCCPGCFRSSPLLSISQAISRFSPSSFFTSLSLPSLSPHHPVNPLLFLLLFFSSLPSLHRIAFWDLIAACRREKAIYAHDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -