Basic Information

Gene Symbol
nfxl1
Assembly
GCA_963971375.1
Location
OZ020507.1:264099990-264132363[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 5.6e+04 -9.4 6.4 15 19 126 130 125 130 0.82
2 17 0.39 1.1e+04 -1.8 0.8 4 10 161 167 160 167 0.95
3 17 8.1e-08 0.0022 19.5 17.0 1 19 175 192 175 192 0.99
4 17 1.6 4.3e+04 -3.8 2.1 5 10 217 222 217 222 0.95
5 17 2.7e-06 0.075 14.7 11.7 1 19 228 247 228 247 0.95
6 17 1.4e-08 0.00039 21.9 13.2 1 19 282 300 282 300 0.99
7 17 1.3 3.7e+04 -3.5 1.4 5 10 324 329 324 329 0.95
8 17 9.6e-08 0.0027 19.3 10.0 1 18 335 352 335 353 0.96
9 17 0.81 2.2e+04 -2.8 0.4 1 5 362 366 362 371 0.75
10 17 6e-05 1.7 10.3 15.3 1 18 387 404 387 405 0.98
11 17 7.1e-08 0.002 19.7 13.0 3 19 416 432 408 432 0.85
12 17 0.009 2.5e+02 3.4 12.0 8 18 476 486 470 487 0.85
13 17 0.42 1.2e+04 -1.9 5.1 3 11 500 508 490 509 0.82
14 17 8e-06 0.22 13.1 6.2 1 12 558 569 558 569 0.97
15 17 0.00071 20 6.9 13.4 4 18 599 613 597 614 0.94
16 17 2 5.6e+04 -4.3 1.6 8 13 619 624 618 624 0.76
17 17 4.3e-07 0.012 17.2 12.6 1 17 665 683 665 685 0.86

Sequence Information

Coding Sequence
ATGGAAATGGCCAAGAAGATAACAGAAAACTATGAATCTAGTTCGGATGAAGAAGAACTCGACGGAGGACAAATCTTAGaaaaattgtacaaaaactaCACGGGTGGAAACGATCAACTGCAAAAGACTGCtgcttttctagaaaacgtcTTGCAATCTGGCTCAGCAATATGTCTCATTTGTATTGGCTCGGTGAAGAGGGCTGATGCTATTTGGTCATGCAAGTACTGCTATTGTGTATTTCATTTGCTGTGTGTTAAGAGATGGGCAAACGACAGTATTGCTCTGCTCAAAGACAAAGGCAACGATGAGCAAGGCTATTACAACAATTTGGGTGAATTTATTCCCAAGAGAGTTAAAGTTGTTAAGTGGTGTTGCCCACAATGTCGTCGGGACTACCAACCCGCTGAAAGACCAACACAATATGAGTGTTTCTGTGGCAGAGAAGTTGACCCCGTCAACCAGTCGTGGTTAGTTCCCCATTCTTGTGGTGAAACTTGTGGAAAACCACTGCAACCCGAATGTGGGCACAAGTGTCTGTTACTTTGTCATCctgGTCCATGCCCACCTTGTCCACAGAATATATTTACCAGTTGCATGTGTGAAAAATCTGCAGCTAAAATGGTccgttgttttcaaaaaacttggaCTTGCGAAAGGAAATGTTTGCAGATTCTTCCTTGCGGCAAGCACAAATGTGACCAAATATGTCATGCGGCTAGTAAATGTCCTCCTTGCAGCAAGTCCAGTCTCCAGAAGTGTGTCTGCGAAATGGAGGAAGCAATTAGAAGCTGTTCGCAGAGAGTGTGGCATTGCAAGAAGgtTTGCAATATGAAATTCAGTTGCGGTATTCACAGCTGCAAAAAAGTGTGTCACAACGGAGCATGTGGCGAATGTCCTCTCAGCCTACCTAGGACATGTCCATGTGGAAAAACTaaaaaaattgcaccTTGCAATGAACCAATTGATACCTGCGAGGATACTTGCTACAAGTTACTCTCGTGTGGGAAACACTATTGTACACAACGTTGTCACAAAGGTGATTGCAGTTTGtgttTGATTGTCACCAAAAAGACTTGCCGCTGTGGAATGCACGAAAAAGAGTTACCCTGTTGGAAGGCTTTTAGTTGTGAGACCAAATGCAAGAAAATTCGGGACTGTGGAAAACATGCTTGCAACAAAAAgTGCTGTGATGATCAATGCCCCCCGTGCGATAAGGTTTGTGGAAAATTGCTCTCTTGCAAGAAACACAAATGCAGCTCTGTATGTCACGATGGCCCATGTTATCCTTGTAAGCTTCAATCCCAAGTCAAATGCCGCTGTGGAAGCACTTGTATAACAGTCCCTTGTGGCAGGGAACGAAGAGCACGCCCTGCTTGCCTTGAACCATGCcgaattcCTTCAAAATGTCATCATCAAAATAAGCACAAATGCCATAGGGGCGATTGTCCGTCATGCAATCAAGTGTGCGGATTGAAGAACGACACGACTAATTGTCAGCATTTATGCCCAGCTCGTTGCCATGCAGCTTATGAAATTAAACAACTGCCACACCCAAAATGTGAAAAGAAAGTAATGGTTACTTGTATTGGTGGCCATGAGATTGCCGAATGGCCATGTTGGAACTCGAAGCCAAGTTCATGTCAACGTATGTGTGGGCGAATGCTAAAATGTGGAAATCACACTTGCTCACTGGTTTGTCACAAAGTTGCTAATCTGGATgacaaaaatGAACAAGGAGGCTGCATTCCGTGCGGCGAAGGATGCGAAATAAAGAGACCAGCAGGCTGCGTCCATCGTTGTAAAAAACCATGTCATCCACCACCATGTGATTCATGTTTTGCTCAAATAAAATCACCTTGTCACTGTGGACTGTCGCAGGTTTATTACAAATGTTCGGAATTTTATTCCATTGACGGAACTTCCCAAGATATTGAAGAACGCCAAGAAAAATTAAAGAGCTGCGGAAGTCGTTGCATCAAAAattatttatgtGGTCATCGCTGTTCGTCTATATGTCATTCAGGACCATGTCCGAACCCACAAAACTGCCGTAAAAAGGTCAAAATCTACTGCGAATGCAAACGTATTAAAGTTGAAGTGACTTGTGAGAAATCACGATCAAATAATGCATCAATATCTTGTGATGACACCTGTCTAGTTCTTAAAGCTGAAGCAGAtaaaatcaaagcagaagaAGCAGAGAGACTTCGGCTTGTTGAAGAGGAACGCAATCGCATTGAATTGGAACAATTCGAGAAAAGATTTGGCAAACGCAAACCAAGAGAACGCAAAATCATTGCACAAGAAATCAAAACCAATAACAACCAAATGAAGCTACTGATTGCATCTGTATCTGCTGATATTAATTCAACTGGCTCCCATTCGAGCATTATCAATTCACTAACGGCAGCAGCAGCAGCGCCAGCAAATCAATCGGCTGAAAAGTTGACACTAGCCAGTGGGCACGAGAGCCTAGTATCGTCGCAAATGTCGTCCAAAGAATTACAACTACAGTTACAGGCAGCACATAGACAACTCACAACAAATCATATTGATAGGAAAGTCTACGAAAGCTATGATAACTTAAACGAAGATAATGAAGGTCGAGGCTGCAGCATATTATCTGTGTCAACTCCGGCTGCCGAAAATGTAGCGCTGTTTAAAGATGACGATAGCCGTTCGGGATCAAGTGACGATTTAACAACACCCATTGTTGATCTTCATCGTCACAGTCGTAACCATAATAATCGAGAAAAAACGGGCGTCGCATCACCAACTTCGACGAACACAATCAAAGTTATAGAAAACGATCATCAGCGACGATGCCAGGGAATAACTATGACAGAAAACACCGGAGGTGTTGGAGCGGGCATTTACCTTGAGACGCCGGTTATCGATGAACAAATACTTGGTCTCAATAGTCATGATTATGAGAAGGCCAAACCAAAAAGACTTAGCGATGAGTTCCTCATGTCGTCGGAGGACTGCTGCGATGATGAacgcaacaacagcagcagcgaTAGTGATCCTCTTGCAATTCATAGTAATAGTAGCATTAATAAGACCGCAGATTGTAATATAAGTAGCAATACCAGAAATATTAgtggatttttaaaaaaggaaggtATACTCAATGACTTGCTGAATTCTGTTATGACTGCCAATGATGACGTCGATGAGGATGATGCTGAAGAATCTGGTAATCTAAGTGGTGGAAGTGCAACGCCAGCAGTTGTCGATTACTGTGTGGAATCTCAGGGCGAAGGCGGTATTATTGATGGGGATGTGCCAGCAGCAAGTGGGAGCATGGCAATACGCTTTAAAAACATCAGCATTGACTACCATTCATATGGTAGCAAAGCGAATAATGAAATTATTAATGATGCCGGCGCAGATGTTGCGGACAACGATGTGCAATCAATGGACGCCATTGAACGTCGAGACTTCGAAGATGAACAAAGACTCACCGGAGGGATAATATTAAAATCTAGTTCGTTAGCTAAGAATGATAGACTTAAATTAGAATTAGTTCACTTAAATGCACAGAATGTCAGTAACCAGCAGCGGATAGTTTCATCAGACAGCAAGtgCACCTACAAGGACCATTCAACAACACCGACCAGCAGCAGGCATTATAAAAGCAGGTTAACAAAATCGACCGCCAAAATAAATCTAACCACCAGCCTAGGTCATCACCCAGAAGAACCAATTTGCAATGGAGAAGTGGATGAACTGGAGCATGTAGCAGAACGTAAAATAGATCAGCCAGATAGTAGTAATAATAGTTCAACGACAAGTAATAGTCTGCACCATAAAGTACAACAACATGAGTCAGAAGCGAGTAACCCTGCCTTGGAGTCTGCTTCATCAACAGGCACAGATTCATCTTTGTCTCCGCTTAATCTACGAACTACTCTTCATGAAAATCCCGCCAAAAAGCTAGTTGAAATCCTTTCGAATCCGAATTCAAATGAAAGTCTATCGGAGCATTCGTTCAATACCTCATCCAGTCATTCCTTGTCACGTTTATCCAAACAGACTCAGCCAGTAGTATGCCTTAGTTCGGAAGAAGAAATTATCAAGAAAGCCATTGAAACAATCAATACGCTACAACAAAAACCCGGAGACGAGGGTATGAACGAAGACGACATTGCTACGACATCCTCCTCTGCACGCTGTCAATATTCGGCGTTAAAATATCTACGAAACTCTCTTAGAAAAGATAGCGCAAGTACATTGCATTGTGATGATACTGCAGCTGCAACATCTTCGGGCTCTGGTAGTGTGGCAGTACAGGAAAAAGCCGTTGCTGCAAATTCTCCCCTCTTTGCCATAAATAGCAACAGTCACCCACATTTCCAACCGGACGAAGTAAACCAGCAACTGAGCCACGAAGGGCGAAGAATGACAGAGTTCCCATACCTTGATGATGCTCTACATAGATTGGATAACGAGTTCGATGAAGAAACCTGGGCTGACTGTGACGAAGGATCCGACGACGAAGTATGTACATGCCATAAGGATAGCTTCTCTAACCAGAGAGACAAGCGTGATACATCAGATCTGGTTTCGGAAGATGCTCTATCAAAAGAAGTGGAACTATCTAGCTATATACAAATGGTGTCGATTTCCGAAGACACCTTATCCCTTGAACAGAGTATGTCTCCGGAATTTACCGGACTGCAACGAAAGCGGAAATTCAACGAAAGTCGCCTTGTGGATGCTGAACACTTTTTGAGCGATACGGTCAGTGGTAGGAAACGTATAGCCTATGATTATTCTTCAACGCCTCGAAGCTCGCAGGCCCTTTTGCTGATCGCGAGTCCTTCGACTCCACTTGGTCGGCGTACACCAAGGTCCTTAATTCCTACGAGAGATAATCCCCCTCCAGAACTGCAAGATTGGTTGATACAATTCCAGCGATGGTCGCACGCTGAACGGCTACTAGCCGTTGATAGACTGATTGAACACTGCGAACCAACACAAGTTCGTCATATGATGAAGGTAATTGAACCGCAGTTCCAGAGGGATTTCATTTCTCTACTGCCACGCGAGTTGGCACTTCAAGTATTAGCTTATTTGGATCCAACGGATCTGCTACGGGCTGCGCAAACTTGTCGCAGTTGGAGATTCCTCTGTGATGACAACCTTTTGTGGAAGGAAAAATGTCGGAAAGCACAAATTTTGATAGAACCGAAGACAGACCGGCCGAAACGTGGACGAGCGGGCAACATGCCCCCAATAGCATCTCCGTGGAAAGCCGCTTACATGCGACAACATATTATCGAAATGAACTGGCGCTCGCGTCCGATTCGAGAACCAAAAGTGTTAAAAGGTCACGACGATCATGTCATCACGTGCTTGCAATTCTGGGGAAATCGCATTGTTTCGGGGTCAGATGATAACACACTTAAGGTTTGGTCAGCCGTTACTGGAAGGTGTTTGCGCACATTAGTCGGTCACACCGGAGGAGTTTGGTCATCACAAATGTCTGGTAATGTAATCATTTCAGGAAGTACAGATAGAACGTTGAAAGTTTGGGATATGGAAACTGGTGACTGTGTGCACACACTGTTGGGGCATACTTCAACAGTGCGGTGTATGCATTTGCACGGAAAAAAAGTTGTAAGTGGTTCGCGGGATGCAACACTGCGTGTTTGGGACATTGAGCGTGGAAACTGTTTGCATGTTCTTGTGGGGCACCTGGCCGCGGTTCGGTGTGTGCAATATGATGGTAAATTAATTGTTTCTGGTGCTTATGACTATATGGTGAAAATTTGGCACCCTGAACGTCAGGAATGTTTACACACGCTACAAGGCCATACTAACAGAGTGTATTCGTTGCAATTTGATGGAATTCACGTTGTGTCGGGATCATTGGATACGTCAATACGTGTATGGGATGTTGAAAATGGCAATTGTAAACACACTCTTATGGGTCATCAGAGCCTAACATCGGGCATGGAATTACGGCAGAATATACTGGTGTCGGGCAATGCTGATTCAACTGTTAAAGTTTGGGACATAACTAATGGACAATGTTTGCAGACACTTTcagGTCCGAACAAACACCAGTCGGCAGTGACTTGTCTGCAATTCAACTCAAGATTTGTGATCACCAGCTCTGACGATGGAACCGTTAAGTTGTGGGATGTCAAAACTGGTGACTTTATCAGAAACCTAGTAGCCTTAGACTCTGGAGGTTCGGGTGGTGTTGTGTGGCGAATTCGAGCAAATGATACAAAACTCATCTGCGCAGTTGGATCCCGCAACGGAACAGAAGAAACTAAGCTTATGGTCTTAGATTTCGATGTTGAAGGTGCCTGCGTCAAATGCTCATAA
Protein Sequence
MEMAKKITENYESSSDEEELDGGQILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADAIWSCKYCYCVFHLLCVKRWANDSIALLKDKGNDEQGYYNNLGEFIPKRVKVVKWCCPQCRRDYQPAERPTQYECFCGREVDPVNQSWLVPHSCGETCGKPLQPECGHKCLLLCHPGPCPPCPQNIFTSCMCEKSAAKMVRCFQKTWTCERKCLQILPCGKHKCDQICHAASKCPPCSKSSLQKCVCEMEEAIRSCSQRVWHCKKVCNMKFSCGIHSCKKVCHNGACGECPLSLPRTCPCGKTKKIAPCNEPIDTCEDTCYKLLSCGKHYCTQRCHKGDCSLCLIVTKKTCRCGMHEKELPCWKAFSCETKCKKIRDCGKHACNKKCCDDQCPPCDKVCGKLLSCKKHKCSSVCHDGPCYPCKLQSQVKCRCGSTCITVPCGRERRARPACLEPCRIPSKCHHQNKHKCHRGDCPSCNQVCGLKNDTTNCQHLCPARCHAAYEIKQLPHPKCEKKVMVTCIGGHEIAEWPCWNSKPSSCQRMCGRMLKCGNHTCSLVCHKVANLDDKNEQGGCIPCGEGCEIKRPAGCVHRCKKPCHPPPCDSCFAQIKSPCHCGLSQVYYKCSEFYSIDGTSQDIEERQEKLKSCGSRCIKNYLCGHRCSSICHSGPCPNPQNCRKKVKIYCECKRIKVEVTCEKSRSNNASISCDDTCLVLKAEADKIKAEEAERLRLVEEERNRIELEQFEKRFGKRKPRERKIIAQEIKTNNNQMKLLIASVSADINSTGSHSSIINSLTAAAAAPANQSAEKLTLASGHESLVSSQMSSKELQLQLQAAHRQLTTNHIDRKVYESYDNLNEDNEGRGCSILSVSTPAAENVALFKDDDSRSGSSDDLTTPIVDLHRHSRNHNNREKTGVASPTSTNTIKVIENDHQRRCQGITMTENTGGVGAGIYLETPVIDEQILGLNSHDYEKAKPKRLSDEFLMSSEDCCDDERNNSSSDSDPLAIHSNSSINKTADCNISSNTRNISGFLKKEGILNDLLNSVMTANDDVDEDDAEESGNLSGGSATPAVVDYCVESQGEGGIIDGDVPAASGSMAIRFKNISIDYHSYGSKANNEIINDAGADVADNDVQSMDAIERRDFEDEQRLTGGIILKSSSLAKNDRLKLELVHLNAQNVSNQQRIVSSDSKCTYKDHSTTPTSSRHYKSRLTKSTAKINLTTSLGHHPEEPICNGEVDELEHVAERKIDQPDSSNNSSTTSNSLHHKVQQHESEASNPALESASSTGTDSSLSPLNLRTTLHENPAKKLVEILSNPNSNESLSEHSFNTSSSHSLSRLSKQTQPVVCLSSEEEIIKKAIETINTLQQKPGDEGMNEDDIATTSSSARCQYSALKYLRNSLRKDSASTLHCDDTAAATSSGSGSVAVQEKAVAANSPLFAINSNSHPHFQPDEVNQQLSHEGRRMTEFPYLDDALHRLDNEFDEETWADCDEGSDDEVCTCHKDSFSNQRDKRDTSDLVSEDALSKEVELSSYIQMVSISEDTLSLEQSMSPEFTGLQRKRKFNESRLVDAEHFLSDTVSGRKRIAYDYSSTPRSSQALLLIASPSTPLGRRTPRSLIPTRDNPPPELQDWLIQFQRWSHAERLLAVDRLIEHCEPTQVRHMMKVIEPQFQRDFISLLPRELALQVLAYLDPTDLLRAAQTCRSWRFLCDDNLLWKEKCRKAQILIEPKTDRPKRGRAGNMPPIASPWKAAYMRQHIIEMNWRSRPIREPKVLKGHDDHVITCLQFWGNRIVSGSDDNTLKVWSAVTGRCLRTLVGHTGGVWSSQMSGNVIISGSTDRTLKVWDMETGDCVHTLLGHTSTVRCMHLHGKKVVSGSRDATLRVWDIERGNCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVENGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITNGQCLQTLSGPNKHQSAVTCLQFNSRFVITSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLDFDVEGACVKCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-