Basic Information

Insect: Platycheirus rosarum
Gene Symbol: Znf541
Assembly: GCA_963971375.1
Location: OZ020509.1:139353599-139384505[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 6.7e-05 0.015 17.3 0.2 2 23 272 293 271 293 0.97

2 6 1.8e-06 0.00039 22.3 1.5 1 23 299 321 299 321 0.99

3 6 0.0001 0.023 16.7 2.6 1 23 327 351 327 352 0.95

4 6 0.0005 0.11 14.5 0.8 2 23 594 615 593 615 0.97

5 6 0.0041 0.91 11.7 0.7 1 23 1589 1613 1589 1613 0.95

6 6 0.00016 0.037 16.1 0.8 1 23 1647 1669 1647 1669 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	6.7e-05	0.015	17.3	0.2	2	23	272	293	271	293	0.97
2	6	1.8e-06	0.00039	22.3	1.5	1	23	299	321	299	321	0.99
3	6	0.0001	0.023	16.7	2.6	1	23	327	351	327	352	0.95
4	6	0.0005	0.11	14.5	0.8	2	23	594	615	593	615	0.97
5	6	0.0041	0.91	11.7	0.7	1	23	1589	1613	1589	1613	0.95
6	6	0.00016	0.037	16.1	0.8	1	23	1647	1669	1647	1669	0.98

Sequence Information

Coding Sequence: ATGATGGGCTTAGACATGGGATGGGTAGCCATGAAGTCGGCAGTTTGCAATGAAAATGGTAAGTGGTTTATTGACTTCTGCAACGCTAATGACCTTGTGATTGATGGTTCCATGTTTAAACACAAGGAGTTCCATAAAGTTCAAAGTGGCCTTCATTTGCCATTGGCTGGACTCTCGCCGCCCAGACTCTTGATGTGTAGTGCCTCTATGGGTGCAGAAGGATCAGTTACATTGCAATTAAGAGAAGCTATTCACTCGTCAGATTCCTCGTCGGTGGACGGTTATTCATCTCTAGACAATGCCCTCACAATTGGCTATCCCGATCCGGACATGCTAGCCGATGTTCTAGGTTCGCTACAAACAGCCTCCTTTAACAATAACTCAAACAGTAATAACACAATGATTAGTGCCATTACTTTGGAGAGTGTGGATAGTAGTAAACTCAATGATATCGGTTCAACCATCAGCAGCACCCCCAACaatagtaacaataataatggcggcaagagcaacagcaacctcaacaccaacaacaacaacaacaacaacagtaagACCTTCAACAACAACAGCCTTATTAGCTGTAGCAGTAATATATCGCTGAACAGTCCGATTAGTGGACAGATAATCAGCATCACCGGTAGCAGTAGTGGCAGCAGTGGCAGTAGCAGTAATTGTAGTACAACCAGTAATAGCAGTTGTAGTAGTAGCAGTAATGAGAGTATATCAAATGTATCAGTTCCTGGATCTAATCCACCGATTGTAAAGAAACAAAGACCCAAAACATCATCCCCCACCCGACACGGACCCCAACAATGTCAGGTTTGCAGTAAAGTATTCGGAAATGCATCTGCTTTGGCAAAGCACAAATTAACGCATAGCGATGAGAGAAAGTATGTCTGTGTGATGTGTTCAAAAGCGTTTAAAAGACAGGACCATTTaaatGGTCATATGATGACTCATAGAAATAAGAAACCATACGAATGCAAGGCTGAAGGTTGTGGCAAATCTTATTGTGACGCACGATCGTTGAGACGACACACAGAGAATCACCATAGTGGACTAGCTGCGGCTGCAACCACCCCTCAGAATCAATCATCTTCCCTTTCGCCGTCAACAGGAACGCCTACCGGCCTCAGTTTGTCACCAGCAACTGCCAGTGgagACGCAAGTTCACCCCACGGAGCAAACTGTATTCAGTTCTCAACCATGGGGGGCAGCGATGATGGTAGTGGCAGCAATAGCAACAGCTCAGGAAAACAATCCTCGTCAGCTGTGAATGTGTCGGTGGTGTCTTCGTCGACGCAAGCCAATTCTTCTTCGCAGTGCTATTCAGCGACGTCTTCGCCTGCTTCTTCGCCTTCGTCAAATGCTTCAATTAAATCTGCTGCTACTGGAGATGGACTCACCAGGCAGCAGCTAGATCTCATTAGTCAAATAATGCAACAGACAAAGCAGGGCAACACCCAGGTGAATGTTGCATCAACGACTGcgaatttgaaaattacaaaTCAACAACCACAGTCACCCCATCAGAGCCAGGCCCAAAGTCCCCAGCAGCAACTGCAGAGACCAAGGACATGGAATATGCAGACCCAGTTGCAGCAAACACAATCCAAGGTGTCACTGATAGAAAATTCCACATCGCCGATTACATCAATTTCCATAAATGAATTACTCAACGGAAGTGGTCcccatcaacaacaacaacaacagatatCCAGCGCCACAttaaaccaacaaattttaaatattgtcaaaattgaacaaaaacctGTAGAGTGCAATCTATGTCATAGAAAATTTAAGAACGTTCCAGCCCTTAATGGCCACATGCGTCTGCATGGTGGCTACTTCAAAAAAGAAGCAGAAACCAAGAAATGCGATAGAAAAGACGGCCTTGGTGGGCCACCACTTCAAACGGCAAGTATTGGGGTGAGAGCTTTGATTGAAGAGAAAATTATCAGTAAAAGATGTAAGGATTTGAAGGGTGCCTTTGTAGTTCCTGCCCCACCCATAACTGCTGCAATCAGACGAACAGCAAGTGATTTGGAAAGCTTTTTAACTCCTAAATCACCGCTTTTAATTCAATCAGGAGGTTCGCCTTCTGAGCGGAACAACAACTTACCAGACATCGGGAACGCTATTCTTCCATCGGGTCTGCAAATTCAAAAGCAATCTGTTCCAATCCACCAAAAATCATCAAATGTGAGTGTTGGGACAGCAACAGTATCAACCAATACTTCAAAGGCTACATCCACCATGGATCATAAAGATGCAACCTTAATTGAGCTCCTGAAGCGTGGTACAAAAGTGGCAGTACGAAAAACATCGAATTCTGATTCCAGCCAGATTTTTACCACTAGCAGTGGGACCCTAATGCTGCCCTCTGAACTATCACTTTCCACCACATCAGGAACATCTAACCCACCATTAGCAATCACTCTTCCCAATGGAGAAACCACTCCTGTCTCACTGACCATATCTCAAGCGTCAAATGGATCCGGTGACGTTTACACCCTCACCTATTCCACAGATTCAGCAGCGTCCTTTTTTGAGGACAGTGATGTCTATAGTGTATCGGAAACTGATATGCTTCTGCAAACAGTTGATTCGATACAATTACTCAACGAGTCCGAAGAAGCGGATCATTTAGATGAAATAAATTCACTTAGTGATTTTCACAATGACACTACGTCTTCTTCTAACTTTGTTGTGAGTAAAAACAACAAGGATATGCAAACGGTGTTCAGTTCCCCATTACAAGATGCTTTGCCCGACTTCCAAACTCTTCATTCCAAGGATTTTGTCCTGTACAACAACGGTACGTGCAAGGCTATCAATAGTAGCGGTGGACAAACCGCTTCAACTAAATCACTTGCAACTGTTATTAAGCAGTCAATTTCTCCACTTCCCTCACCGCTGGCATATCCTACCCCACCAGCAAGCCATGAGACAATAGCTAAATCTTCGCCATTCCTGGATGATTCCCACCACTTTTCGGATGCAGCGAACTCCTTTTTTCAGGAGAAGTCCACATCTGACTTCATTGACGAAGCAGGTGGAACTTTCTTCAAAGACTGTTCCAATGAAGCACTCACCGAAAGTCAGAAAATCCTCAAACTCAAGAGTGTCCTTGAAGACAGTGGACAATTCTTCAAGTCTGGCGATGATAATTCAAATGACGTTTTCGATACATCGGTTGTTAAGGTGGAAGATCTCCTAAATGAATCCAACGATGGGGCAAACTGTGATCTCAAAGACTTTGCCGAACAGAATCTATCCTTTTTGGAAGATGCTCAAGGATTCCTTGATGATTCTCGCAATGCCACCTCCCCACTGTCGGAGTCATTTTTCACAAGTGGCATTGGCACTGCCGAAGAGGTGAAAGAAGTTCTGCGTGATGTTTTACCCGATGAATCTCTGAGTTGTGATCCACAAAATTCAACCGATATTGACCTATACTATCTGCCGGGATTGGGCCTACAATCTCAAATGATGTCAAATTCAGAGGATCCTCTTCTGTCATCTTCACCCAGAGACTTTGGGCACAGATTGAATATTCAACAAAATCTCCATCAGCAGCCGCAATTGCTTCGGATGGATCACTCATCAAATATACCGGCGCATCAGTTGCTCCCCAAGAAACCAGATCCAGAACCATGTTTTCCACTATTAATGGCCACTAGTACGTCCAAAGATGGAAACACGGAATTCCATTTCACAATTCAGCCGCAGGAGACTAAGCAAGACAACGAAAAAGTTACCGAACCAGATTTATCTGCTGGCCACATGTGTGTGGACAATCAACTGGCAGCTCCACAACTGCCACCCCCACCGTTCAAGGATAATTCAGCTCCTTTGAAAACATCCAATTTCTTCGGAGTAAGTGAGTTCACTGCacagcaaaaccaacaacaaccgcAGAACATTCTAGCGGCAGCTGCCAGTGCTTCTCCTTTGACAAGttcaatattgaaaagaagATTACGTCAGGGTTCCATCTGTGGTGAGAGTAGCTCCCATTCGAGTAGTATTCCTCGTAAATATGAGCTTTACAAGTCAAAACTGCGAAAGCCGTCAACTACTCATTACACTCCCCAGCCGATTCTCGATCCTGGAAGAAAGGGTACCGGTTTGTATTCCAATTTACCCAAACCACCCACGTATGCCCAAGATGCTTTGCATTTGGATGATGAATTCGAAGAGGCTGCCAGCCTAATGGCATTCCTTGACGAATCTAAAGTGAACATTGGTACAGCATATCAGGCCACTATTCCGGCTCAAGAAATGACGGATATGTCCCATCATGTTGAGCAAGTTGAAGTGACAGATCACGAGGAACTTATGTGGGATCCCAGCGTGGCAACGGATGAGAAGATTCTCACGAGATACATCGAGCTGAGCAAATCTTCAGCCATTCCACTTGGTTATCACTCGGAAGAGGTAGCTCTTAAAGCTTTGCTCCAAGTTCAGGGTGATACACCGATAGCTGTGTTGAATCTCTTGAAGTCGCAATCGAATCCTTTCCAGTTGAAATGGTCGTCGTTAGAAGTGGAAATGTTCCTTCGGGGCTTGGAGAAATATGGCAAGGACTTCTATAGCATCTCCAGAGAGatTATAACAAAGTCCACGAGTGAATGTATACAACTATACTACTTCTGGAAGAAGCTATGTGTGGATTACAAGATGACTCATTTGAAGGCCGAAAACGACGATGTGTCCCAATCGCAATACTCCTTTCAAGCTGCTGAACATCGTCCTCACGTTTGCGAAATGCCCGATTGCTCAGCTAGCTTTACATCCAAAGCAGCTCTCCATGGACACACAAGGATCCACTGTATTGGCCGCAATATGAATCAActgaataacaacaacaattcgATGATAATCAACAACAACGGCCAATTGATGTCCCAAACGAATCTTAAAGATGATTTTCCCTGCAAGGTGTGCGGCAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCTCATATGAAATCACATCGTCCTCAGGAAAATGATCCAAACAATCTATCACAACAGCAACCAATAacactacaacaacaacaacaacaacaattgcaGCCAAATACAAATTCATTATAA
Protein Sequence: MMGLDMGWVAMKSAVCNENGKWFIDFCNANDLVIDGSMFKHKEFHKVQSGLHLPLAGLSPPRLLMCSASMGAEGSVTLQLREAIHSSDSSSVDGYSSLDNALTIGYPDPDMLADVLGSLQTASFNNNSNSNNTMISAITLESVDSSKLNDIGSTISSTPNNSNNNNGGKSNSNLNTNNNNNNNSKTFNNNSLISCSSNISLNSPISGQIISITGSSSGSSGSSSNCSTTSNSSCSSSSNESISNVSVPGSNPPIVKKQRPKTSSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGLAAAATTPQNQSSSLSPSTGTPTGLSLSPATASGDASSPHGANCIQFSTMGGSDDGSGSNSNSSGKQSSSAVNVSVVSSSTQANSSSQCYSATSSPASSPSSNASIKSAATGDGLTRQQLDLISQIMQQTKQGNTQVNVASTTANLKITNQQPQSPHQSQAQSPQQQLQRPRTWNMQTQLQQTQSKVSLIENSTSPITSISINELLNGSGPHQQQQQQISSATLNQQILNIVKIEQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKEAETKKCDRKDGLGGPPLQTASIGVRALIEEKIISKRCKDLKGAFVVPAPPITAAIRRTASDLESFLTPKSPLLIQSGGSPSERNNNLPDIGNAILPSGLQIQKQSVPIHQKSSNVSVGTATVSTNTSKATSTMDHKDATLIELLKRGTKVAVRKTSNSDSSQIFTTSSGTLMLPSELSLSTTSGTSNPPLAITLPNGETTPVSLTISQASNGSGDVYTLTYSTDSAASFFEDSDVYSVSETDMLLQTVDSIQLLNESEEADHLDEINSLSDFHNDTTSSSNFVVSKNNKDMQTVFSSPLQDALPDFQTLHSKDFVLYNNGTCKAINSSGGQTASTKSLATVIKQSISPLPSPLAYPTPPASHETIAKSSPFLDDSHHFSDAANSFFQEKSTSDFIDEAGGTFFKDCSNEALTESQKILKLKSVLEDSGQFFKSGDDNSNDVFDTSVVKVEDLLNESNDGANCDLKDFAEQNLSFLEDAQGFLDDSRNATSPLSESFFTSGIGTAEEVKEVLRDVLPDESLSCDPQNSTDIDLYYLPGLGLQSQMMSNSEDPLLSSSPRDFGHRLNIQQNLHQQPQLLRMDHSSNIPAHQLLPKKPDPEPCFPLLMATSTSKDGNTEFHFTIQPQETKQDNEKVTEPDLSAGHMCVDNQLAAPQLPPPPFKDNSAPLKTSNFFGVSEFTAQQNQQQPQNILAAAASASPLTSSILKRRLRQGSICGESSSHSSSIPRKYELYKSKLRKPSTTHYTPQPILDPGRKGTGLYSNLPKPPTYAQDALHLDDEFEEAASLMAFLDESKVNIGTAYQATIPAQEMTDMSHHVEQVEVTDHEELMWDPSVATDEKILTRYIELSKSSAIPLGYHSEEVALKALLQVQGDTPIAVLNLLKSQSNPFQLKWSSLEVEMFLRGLEKYGKDFYSISREIITKSTSECIQLYYFWKKLCVDYKMTHLKAENDDVSQSQYSFQAAEHRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNMNQLNNNNNSMIINNNGQLMSQTNLKDDFPCKVCGKVFNKVKSRSAHMKSHRPQENDPNNLSQQQPITLQQQQQQQLQPNTNSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522200;
90% Identity: iTF_01211891;
80% Identity: iTF_01211891;