Pros028657.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platycheirus rosarum
Gene Symbol
RREB1
Assembly
GCA_963971375.1
Location
OZ020508.1:68149062-68155008[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.033 7.4 8.8 0.8 1 21 237 257 237 259 0.93
2 14 0.00031 0.069 15.2 0.2 1 23 269 291 269 291 0.98
3 14 9e-06 0.002 20.0 5.2 1 23 297 319 297 319 0.98
4 14 0.079 18 7.6 4.1 2 19 518 535 518 541 0.95
5 14 10 2.2e+03 1.0 0.8 1 11 581 591 581 601 0.85
6 14 0.0083 1.8 10.7 0.1 1 23 747 769 747 769 0.97
7 14 5.1e-05 0.011 17.7 0.9 1 23 778 800 778 800 0.99
8 14 0.00089 0.2 13.8 2.4 1 23 806 829 806 829 0.97
9 14 0.00093 0.21 13.7 2.1 1 23 1175 1198 1175 1198 0.95
10 14 8.1e-05 0.018 17.0 0.3 2 23 1504 1525 1503 1525 0.97
11 14 0.14 30 6.9 6.3 1 23 1531 1554 1531 1554 0.97
12 14 4.8 1.1e+03 2.0 9.0 1 23 1660 1682 1660 1683 0.95
13 14 0.079 17 7.6 1.1 3 23 1732 1752 1731 1752 0.91
14 14 0.0013 0.29 13.2 4.8 1 23 1758 1780 1758 1780 0.99

Sequence Information

Coding Sequence
atgttgaaaacatCAATCAAAAAGGAACTAACTGACATTCCACTGCTGAAAAAAGATCGACGCGAATCCACGACATCGGATTCATCTGTCGAGCCCATGGATTTAGGTCTATCGAATTCGAAAATCTGCACAAATATGACAGATCACAGCACACCATTgccaacaccaacacaaatcAAAGATGCCATTTTATCAGATGCCAATACAAAATATCGTTACGAGTCCGATGCCGCCGACGAGTCCGATGATAGGGATAGAGATCATCCACAAAGAAGATCAAACAGTCAACATCACTACCATCATCGTCGACGTGGCACTAACAACACAATACATGACAAACGCACAGTCCTCTTGGAGTGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGTTTCAGCACCAGTAACAGCGCCAACAATGCTGTTTCTGATACTGTGATCAATTTGAAATCGAAAACATCGAATAATGATTCTGTGAAATCATCAGCGGCTCCGACAAATCtaacagcaacaacaaacaacGAATCAGGATTTGTTGATGCTAGTATAAGTAATGTTTTAAACACCTCAGGATCATcggcaacatcatcaacatcgtcGTCGTCACCGACATCATCGTCGTCTGATTCACCGTCTGCGAGTAATGTTGCTTCGGCCGTTTCCAGTCCGGATTCGGCTGGCATTGGTGAACGTGATGACATGAAGTACCTTTGCCCAATTTGTGAAGTGGTTTCGGCTACACCGCATGAATTCACCAACCACATTCGGTGTCATAATTATTCATCTGGGGACACGGAAAATTTCACCTGCCGCATATGCTCCAAGGTTCTATCATCTGCGTCATCATTGGACCGACATGTCTTGGTGCACACTGGTGAGCGGCCATTTAACTGCAAATATTGCCAGTTGACATTCACCACAAATGGTAATATGCATCGTCACATGCGAACCCACAAACAACACCAGCAACATTATCACCGCAATTCAAATTGTACAAAAGGCTCAAATGGTGGCACCTCAAACTCACTACCAGTCCTACCACGAACCGACCAATCTACGTCTCAAACGGCAGCCACTGTAAATAGTTTGTCTTCAAAACCCACAACAAACACAAGCAATGGTACTGTTTGTAATACCAATGGCGACTTAATTTCAGGTGGGGGAGGTGGTGGCGAAAGCTATGACAGTGATGGTGGTTGCTCAACAGATTCATCGAGTGGCATCAGCCAAAgttccaataacaataacaacagcaataccaacaacaaaaacataagcAATTTTAAACGCAAGAGTACCGACAGCTTAGATGACATGGCCATGATGAAACGACGCGTGAAGAccacgattaacaacaacatcATCGATACTATTCACACCATACCAGAGAAAAGTGCGCAGGTGGAAGTACCAAGTGCTATCGAAGACTttaagcaacagcaacaacaaatacAGAAACTCTTCTGCCCAGTTTGCAATCGTGATGATTTCGTAGGGATGCTGGCGTTAGGCGCCCACATGGACAGCGATCATTCGGACATTCCAGCCAAGTGTCGTGATTGCGATGTGGTTTTCAAAACTCATAAACAGCTCAATGTCCATCCATGTACCAGTAAGCATAAAATCACTCAAGGTTTCAAGGATTTGACCTTCGTTGACTTCTCGAGTGAGAAATTCCCCTTGATTGCGAAGTCCCTGTGTGAGCAAAGTCTTCGGGCATCAGTTGGTGGTCAAAAGTTCGAGTGCTCGAAGTGTtacagagcatttccatgtgtAAGTGCAGTTGAAATTCACGAGAAAGATTGTACGACATCTGGTTTCGCAGATTTCTCCAACCGCAAACTAAGAGCTTACAGCGAAAGCTCAGGAAATGCAGACGATGACGAAAATAGGCGTGAGGAGTTTTTCAATCGTTTATACTTAACGAATAAATCTACAGCACAAAGCATGACCAGTTTATCAGTGTCATCACCATCTTTTTCCGATGTTAAATCGCCAGAGCTTGATAAGACACCTGTTAAGACATCACAATCGGATCAGTTCCAAGACACCAAAGAACTTGCTGACATTCAATCGATCCTCAATATAACTTCGTCTTCGTCAACAAGTAATTTTCtgcgaaattttgaaaattcagtAAATGCACCAATAAGTAATTATGGTGCTGAAAATGGCGAAGAGGAAGCTCAGGATGCGTTTACCTCTGAGTTCCGTAAGATGAAGTTACGGGGAGAATTCCCTTGCAAGCTTTGTACGGCAGTATTTCCAAACTTGCGTGCACTGAAAGGCCATAATAGAATACACCTTAGTGCTGCAGGAGCAGGACCTTACCGCTGTAATATGTGCCCATATTCAATTCATGATAAAGCAGCTCTCGTGCGACACATGCGCACCCACAACGGTGATAGACCTTACGAGTGTGCGATCTGTAAATATGCATTCACAACGAAGGCCAATTGTGAAAGGCATTTGCGAAACCGTCACGCAAAGACAACTCGCGATGAGGTTAAGCGTGCCATCATCTACCATCCATCGGAAGACTCGAATTGTGATGATGCCATGAAGAAGTTACATATGTTCTCATCGCCCGAATTCGATCAGGATGACATGGAACAACACCATCCACCAAAGGACCGCTCAACACCGGTTTCCCATTTAAAGGAAATGCTTCAAGCTGAATCCAAGCCAATGAAGATACAAGTAAAGAGTTTGGAAAAGTTAATTGACAAACCATCATTCAATCAGCCAGATGAGATTGAAAACATTCAGGAGCCACCTATATCTGAACAAGACAAAATAAATGGCCGACCAATGGATCTTAGCATGGATGCATTAGATTTAAGCaaaaaatctgtaaaaatagaaaaagtggAAGAAAAACGAGTGCAATCTCCTTCAACCATAACACCACAAGTAAATCCAGCCCGCCCACAAACCGATGAACCAAGCATTGACATGCATCTTCTGGAGAAAAACCAACAACTCTTATTGGCACAGCAAAGACTACTCAACGAAGCAATGCCAAAAATGGATCCCGCACACTATTTCCAATTGTCTCAGTTGTACAACAACTTGGTTTTCCAACCACTTAATCCATTTTTCCTTCAAAattcttttctttcaaataaaatcaatgatttgaaaaaaattattcctccCCTAAATTCAATCTATCCTGGAACCCCGGCAGATTGCTTCTCTTCGCTCACACCAGAAAAGcataatcaacaaaatttacaacCTAAACCAAACCAAATCCAAGAAGAAGTAAGCTCGTCAATGAAACAAGTGAATTCTCAAGCTCAATCACCAGTGCCTGTAAATAGTCATGTTCTACCAAGGAACCCAACACCGTCCTTGTCTCAAATGCCAGTTATGCCAAGAAGTCATCAACACCTTACGCATTCTTCAGGGATGCTTCCCTCATCTCTGCCCAATGCTGGTCCTGTGAAAATGGTCATCAAAAATGGAGTCCTTATGCCGAAACAGAAGCAACGTCGTTATCGCACTGAACGTCCATTTGCTTGTGATCACTGCTCTGCAAGATTTACCCTGCGTTCGAACATGGAACGTCACATTAAACAACAACATCCTCAATACTGGGCCCAACGACAACGCAGTGGTCATCACATAATGCGTGGTCGTGCCAACAGTTCCTCGGTCCTCTCTCATATTCAGACAGGCCATTCACCCTTAGAAGCTCCACGCCCAACTGGAAACAGTGGCATGATGACCAATCCCTTGAGTGCCATTTCCGACCAAGTTAAATACGCCATACTTGCCCAACAATTAAAAGCTCGCAAGGAAACTGATATTCTGCAGCAGGCCTTATCTCAGGGTTCAAGCAGTGTGCTAACACAAAATCCAACATCAGCTATTAGTAGTCTTCGCCAGTCGCTAAATGCATCGAACAATCCCAATAATGGAAGCATTGAGGACGATGATCCAAAACTTGTGATCGATGAAGACGACGAGGAACAAGACGAAGatgaagacgaagaagaagatattgaaGACCGTAAACCAGAAAATTTGACCAAATTTCAAGAATTACAAGAACAAACAACCAATGAAGCTGCTAAAAAGGTTGCTGAATCTATActcgaacaagcaatgaaaacTGGTAGCATTAAAAATTCATACAACAAAGATGAAGATCGTAATCCATCAGTCGGAAAAGACTTTGGCTTGAAACTGTCGAAGAATATGATTGCTCAAGCTGAATCTGTGGGCAAGTTCCTCAAGGAAGTCGCTAGCTCTCCATTCAAAGATGAATCCAATGATTTAGTCTCGGTGTCTAGGTTAGTTGACAACGCCACCAATTCTATgtcatttaataattatttccgACCCAGTGACGTTGTCAATCAAATGGAACAAAGTGACGAAGAAGGACTTGTTGCATCGGGCAGTGCATCGGAAAGTAATAATTCCGGTCCCGAGGATATGGTCAGTTCGCAAGAGCCGAAGAAGAAATCTGCCTACAGCTCGGCACCAAATCGTGTTTCCTGCCCGTATTGCCAACGAATGTTCCCTTGGTCAAGTTCTTTGAGACGCCACATCCTCACCCACACCGGACAAAAACCATTCAAATGTTCTCATTGTCCGTTGCTCTTCACCACCAAAAGCAATTGCGATCGTCATCTGTTGCGCAAACATGGAAACGTTGAATCAGCTGTGTCATTGTACGTTCCCATTGAGGATGTTAATGAACCCCTGCCAGTGCCTAAATCTGTCGAAGAAATTGAgttacagcaacaacaacaactcctacaacaaaaacaacaaaaacgacTAGAAGAACTTAAGGAAATGGAGAAACTCCAACCACCACTCACTCAAAAACCAGCCGAAGCAAATCAGGAGCTGACTTCAAGTACAACCTTAACATCCACTCAAATCGCCGCCGTCAATGCCGGATCTAAACTTGATACGATATCCTCATCTCAAATGATTTCGTCTTCAGAGTTGCCATTCAAGTGCCATCTTTGTGACTGTTCGTTTGCTGAACGCTTTCAATGTCTCGACCACATTAAAATCCATCATGCTCAAGAATTTTCACTTCTCCTATCCAAAGGCGCAATTGAAAACGAAGCCGATCTCAATACCCATGTTCAATCTACCGAAGACGATGAAAAACGCGACGAAAGTCGTGGTAAATACCCCGATTATACCAATCGCAAGGTCATTTGCGCTTTCTGCATGAGACGCTTCTGGTCGACAGAGGACTTACGTCGCCACATGCGAACTCATTCTGGCGAACGACCATTTCAGTGCGACATCTGTCTGCGTAAATTCACGCTCAAACACAGCATGCTGCGACACATGAAGAAACACAGCGGTGGCAGTCATTCCAGCAATGGAACAGCCAACGCCGGCAACAGCGGGTCTGATGTCTCCGACGATGAACAACCGCCATCTAGTGTGATGCTTGCAAACGCCCTACGTTCCCACAAAATCCAGgagcttttttcaaaagtcAACAACGAGTGGCGCAACAATCGTCTCTCTGGTGAGCACAAAGAGAATATCGAAGAACACCACAACAACCAATCCGATCTTATTGGCAACTTGCTCGGCATTAGTGATCAAGGAATTCTCAACAAGCTACTTTCATCAGCTGACGAAGCTGCCAAGTTTCTTGGTGTCGAAAAGTAG
Protein Sequence
MLKTSIKKELTDIPLLKKDRRESTTSDSSVEPMDLGLSNSKICTNMTDHSTPLPTPTQIKDAILSDANTKYRYESDAADESDDRDRDHPQRRSNSQHHYHHRRRGTNNTIHDKRTVLLECTDSPHSLRKKFRFSTSNSANNAVSDTVINLKSKTSNNDSVKSSAAPTNLTATTNNESGFVDASISNVLNTSGSSATSSTSSSSPTSSSSDSPSASNVASAVSSPDSAGIGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNCTKGSNGGTSNSLPVLPRTDQSTSQTAATVNSLSSKPTTNTSNGTVCNTNGDLISGGGGGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNKNISNFKRKSTDSLDDMAMMKRRVKTTINNNIIDTIHTIPEKSAQVEVPSAIEDFKQQQQQIQKLFCPVCNRDDFVGMLALGAHMDSDHSDIPAKCRDCDVVFKTHKQLNVHPCTSKHKITQGFKDLTFVDFSSEKFPLIAKSLCEQSLRASVGGQKFECSKCYRAFPCVSAVEIHEKDCTTSGFADFSNRKLRAYSESSGNADDDENRREEFFNRLYLTNKSTAQSMTSLSVSSPSFSDVKSPELDKTPVKTSQSDQFQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGAGPYRCNMCPYSIHDKAALVRHMRTHNGDRPYECAICKYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDEIENIQEPPISEQDKINGRPMDLSMDALDLSKKSVKIEKVEEKRVQSPSTITPQVNPARPQTDEPSIDMHLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLNPFFLQNSFLSNKINDLKKIIPPLNSIYPGTPADCFSSLTPEKHNQQNLQPKPNQIQEEVSSSMKQVNSQAQSPVPVNSHVLPRNPTPSLSQMPVMPRSHQHLTHSSGMLPSSLPNAGPVKMVIKNGVLMPKQKQRRYRTERPFACDHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSVLSHIQTGHSPLEAPRPTGNSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTQNPTSAISSLRQSLNASNNPNNGSIEDDDPKLVIDEDDEEQDEDEDEEEDIEDRKPENLTKFQELQEQTTNEAAKKVAESILEQAMKTGSIKNSYNKDEDRNPSVGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLVSVSRLVDNATNSMSFNNYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQQLLQQKQQKRLEELKEMEKLQPPLTQKPAEANQELTSSTTLTSTQIAAVNAGSKLDTISSSQMISSSELPFKCHLCDCSFAERFQCLDHIKIHHAQEFSLLLSKGAIENEADLNTHVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGTANAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVNNEWRNNRLSGEHKENIEEHHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357374;
90% Identity
-
80% Identity
-