Pros002982.1
Basic Information
- Insect
- Platycheirus rosarum
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963971375.1
- Location
- OZ020507.1:41127486-41133814[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.063 3.5e+03 -0.7 1.3 66 131 44 110 30 122 0.59 2 2 1.7e-93 9.6e-89 298.6 7.4 2 217 283 482 282 483 0.92
Sequence Information
- Coding Sequence
- ATGTTCAAGCCCATTCGAAATCTCAtcacatacatacaaaaaaatgccaGTGGCTCAACATTTTTTGGAGGAACCCCATCGAATACAGAACTGAGTGATACTGCTATCACCATGGAGTGCGAAATGAATGAAACAAACGAAAGCGTAGAACCCACAGCGGAAACGTCTACGTCAACAGAACCAACATCATTGGTTGATGAGAAAAATCTCCAAGAGAATAATAACGACACAGAAGAGAAACTAGTTTTGAGAGAAAGCATCCCTTTTGTGAGTACAAATCCAGTTCCAGTGCAGCAAAAGCGCATTGATGTTCGAGACAATCTCTTGgcggaggaggaggaggaggaagaGGAGAAGGATATATTTCTAGACTTTCCAcccgaaaatgaaaatgatgtcaattTTCCTGTCAGTGAAGTGATAGTGATGAATGACCCAGATTTGAATGTGTCAACAAATTCAGATCCTTCATTAGATCCACTGGCAATAGATGATTACAATTCACATATAGAATCCAACCCGTTAGAGTCATCAACTGAGGGTGAAGTTTTATTTGTAGTTGATATTGAAGAAGTTGTAAGCCAAGCTCCGCGGTTAGTAGATGAAGTTGAAGATTCCACGCAATTAACAGCTGTCAAATCCGCGGATGAACAGGAGCTACGTAGTGATGGATCAGATTCTGGACTTGGTTCTGAGACATCTACTCTAACCAGTGTTACAGATACCAGTGTTAGTTCAGCTATGTGTGCCTCACCAATTATGGAGAAAACTACTCCTTTGCGATCCAATTTGAAACGACACATTGAAGACGTCGTTGATGGTGGAAGTCGACAACTACAAAAGAAACCGAGGAGATCAATTAACTTTGAAAGCGTTAAGGTCTTCTATTTTCCACGCATTCAGGGTCATATGTGTGTTCCGTCACAGGGTGGCTGCACCTTGGGAATGGGTGCTCATCATATAAGttttaaaacatttagtttGGCTGAACATGCAGCAGAGATTAGACGAGCTCATAAATTGCAATTGCAAGAAATTAATCCACGAAGTTCCTCCAGTGATGAATCTGATAGTGATGAGGAGCTAAGCGAAGGCAGTGGATCAGACTTAGATGCCGATACAAATGGTTTCCTGCAACCGGTTTCACCGAAACAACGAAGAGCATTATTGAAAGCGGCTGGAATTAGGAAGATTGATGCAAGTGAAAAAATCGAATGCCGTGACATAAGGAATTCACGAGAAGTTTGCGGGTGTGTTTGCAGGGATTTCTGTGATCCAGATACGTGTGCGTGCAGTCAAGCCGGAATTAAATGCCagGTTGACCGCGCAATGTTCCCCTGCGGCTGTTCACGTGATGCCTGTGGCAATGTCATTGGTCGCATTGAATTTAATCCAGCTAGAGTTCGTACACATTTCATTCATACAATTATGCGGCTTGATATGGAAAATCGACAGCAAAAGCGCACCGACGAACTAAGTTCTCAAATGTTGCCCTCACCATCGCACTTGGTTTATAATAATGTTCCTGCCTTAGCGAACAGCAGCACAACAGCCATCAGCACTTATAACCAGCAAATGCCCAGTTATGGTCTAGACCAAAGTCCAAACGAAGTATACCATCACCATATGCATCAGCAGCAATACAATATGTATAATAATCATATGCCACCAACAAATCCTGCCAGTGGCTTATGTGCTCAATTGTCGCCACCCTCAATGGTCCTAAATGGACCACCAACAGCCGCATTGCCTCTACCGCACAATATCTATGCCAATTGCTCTTCTACAGAACCGGACAGCACAGCCTTGAATGGTGGAAACCTGCACTACCAGGATTCACCGATATATCCACCAATTATGCCACCTGTCGAAACTTATGGCGATATATTAGCACCCTATGCCAACACGACGCCATATGAAAACACCCAACCTGCTGTAAATAACAGTTATCCATCATCACCAAATGTATACACAAATTATCACAATCCTCACCACCACAACAATCATGTCCAGTCGCAGCAACCTTTCTTGGGATATACTAATACCTGCAGTGGAGAAATGTCCGAATTCAGTGAACCCCAAAATAACTTTATAAGCCTTAATACTCCCGAGGCTAGCTCTTCTCGATTGTCGGCAATAAATGATTTATTGCACAACAATCGTAACACAACAGCTGCATTAGTTGCAGTTTCATCTATAGAAACAAGCTTAATACGATGTGAAGCAGAGCCACAGGAAAAGGTGGCAAACCACCTGCCAGTCTCTGATGTTAAGGAACCGATTGCAAAAACTATTGAAACCTCCGAACCGCCAGGCATCTGCGCAAGGCCAGATACACCTCCTGATGATGAACCTGCAACTGAATCTCTTGAAactaatatctttttaaaaGAACTCCCAAAAACAGATGAACAATTCGAGATTGCAACTGAAAGTCCATCCGAAGTAGCAGAAAACACTAAACAAATAGATAATCTccaagttgaaaaaagtgaacCACCTCCAATAGAAGTATTGCAAAATGATGTTTTCGCTTGCAAGACGAATATAATTACAGACAACATATCTATTAATGGCTCAAGCGATCTGCAAGCCGATTTACTTACAAAGGCAGACGAAAACGGCATCAACAACAACTCACAAATTCCCCCAATTGTCGAGAGCGTGTCAGCCTAG
- Protein Sequence
- MFKPIRNLITYIQKNASGSTFFGGTPSNTELSDTAITMECEMNETNESVEPTAETSTSTEPTSLVDEKNLQENNNDTEEKLVLRESIPFVSTNPVPVQQKRIDVRDNLLAEEEEEEEEKDIFLDFPPENENDVNFPVSEVIVMNDPDLNVSTNSDPSLDPLAIDDYNSHIESNPLESSTEGEVLFVVDIEEVVSQAPRLVDEVEDSTQLTAVKSADEQELRSDGSDSGLGSETSTLTSVTDTSVSSAMCASPIMEKTTPLRSNLKRHIEDVVDGGSRQLQKKPRRSINFESVKVFYFPRIQGHMCVPSQGGCTLGMGAHHISFKTFSLAEHAAEIRRAHKLQLQEINPRSSSSDESDSDEELSEGSGSDLDADTNGFLQPVSPKQRRALLKAAGIRKIDASEKIECRDIRNSREVCGCVCRDFCDPDTCACSQAGIKCQVDRAMFPCGCSRDACGNVIGRIEFNPARVRTHFIHTIMRLDMENRQQKRTDELSSQMLPSPSHLVYNNVPALANSSTTAISTYNQQMPSYGLDQSPNEVYHHHMHQQQYNMYNNHMPPTNPASGLCAQLSPPSMVLNGPPTAALPLPHNIYANCSSTEPDSTALNGGNLHYQDSPIYPPIMPPVETYGDILAPYANTTPYENTQPAVNNSYPSSPNVYTNYHNPHHHNNHVQSQQPFLGYTNTCSGEMSEFSEPQNNFISLNTPEASSSRLSAINDLLHNNRNTTAALVAVSSIETSLIRCEAEPQEKVANHLPVSDVKEPIAKTIETSEPPGICARPDTPPDDEPATESLETNIFLKELPKTDEQFEIATESPSEVAENTKQIDNLQVEKSEPPPIEVLQNDVFACKTNIITDNISINGSSDLQADLLTKADENGINNNSQIPPIVESVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -