Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_963971375.1
Location
OZ020508.1:27844023-27845868[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.36 1.3e+03 1.1 0.0 3 44 19 59 18 60 0.76
2 4 7e-06 0.026 16.2 0.0 4 38 302 339 299 340 0.86
3 4 1.2e-09 4.6e-06 28.2 0.8 2 43 387 433 386 435 0.85
4 4 3.4 1.3e+04 -2.0 0.5 6 14 456 464 455 464 0.86

Sequence Information

Coding Sequence
ATGAAATCATATTTAGTATGCTTTCTTGTACTATCCCTCACTTACGGAGTTCAATCATGGGACAAAGACGAACTGGAAATCTTCGATTTAGtcgaagaaataaacaaaaacttctACGAAGTCATGGGCATTTCTCAgGATGCCACTGGACAAGAAATTAAACGTGCTTTTCGCAATCTATCTATTGTCCTTCATCCCGACAAGAACAGTGCTGAAGATGCTAATATCCAATTCAGGAACCTTGTATCGATCTATGAAGTACTCAAAGATCCttcaaaaagagaaaaatacaATAAAGTATTGAAAGATGGCCTGCCTAATTGGAAATCTGCTCTGTATTACTACCGACGAATGCGTAAAGTAGGATTGTACGAAGGAGCGCTAATTATTTTTGTCATCATATCCGTTGGACAGTACATGTTCTCGTGGGCGGCTTATTTGGAAAAGAAATACACAGCAGAACAAGTGTTTGGCTCAAGactaaaaaaactacaaaagaaaaacaGGAATATTGATCTAGATGCCATACTTAATGAAATACCTCCACCGTCTATACTAAATACATTACCCTTTCAAATACCATTGTTCTTCTGGAACCTGCCGAGCACAATTAAATCTGGAGTTTTAAAGGCGAATGAATTAAAAGAAGCGGCTTTGGAAAAACGAAGATTagaagcTGAAGAAATAAAACGACAGCAAGAACTGGAAGAAGAGTTCGAAGAAATGGCCCGCgcaagaaaagagaaaaaggaGAACATTCGAAAGCGTCGACAAGCCACTAAGGCGCCAGAAAAAACTGACGCTGAACTAGCTGGATATTCCCGGATCGAAGCCAAAGAACTAACTGAAAAGGACACAATGAAACCAGTTACACAAAAGACAACACCACTAAGCGGTGGTTTTTGGACAGACGAAGATCTAACTGAGTTGATAAGATTAGTTAAAAAATATCCTGGAGGTGCTGGCAGTCGATGGGAAATGATCGCTGAGACTATGAACCGTTCGGTGCAAGAAGTCACCTTCATGGCAGCCAAAATGAAAGAAAACGGCTATCGAATTCCTGGACAAACAGACAGCGTTGCTGAGACCATCGTACAGGATGtggagaaaaagaaagaaaaaatcaaaaaagtcgATAAAACCATTCTTATTCCCGAAAAAAATTGGTCCCAGGAGCAACAGCGCGCCTTAGAGAATGCCATTGTCAAGTACCGCAAGGCGGCAGGATCCGATCGTTGGCAAAAAATTGCCAATTGTGTTCCTgagaaaacaaaagaagaatgtCTTCTTCGTTACAAGCATCTTTGTGACTTGGTTAAGTCGCAAAAGACCAAAAAAGCTGCTGGCAGTGAAGAGGACAAGAACGATGAAGAAGACGAAAAAATTGTAGAGCCAACTAGCCAGAACGTCGAGGATGTTCTAGAAGATGATGACGCACAAGCCGATATTGAAGAGGATGACCAAGACGAATTAAAACCAGCAAGTGAGGAACAAACGAAAAACAAGggcaaaaaaagaaataagcgAAAGGAGAGGAAGCGAATGCGTGAATTCTCCAGCGATGAAGATACAGGCGACGAAGTCGTGTAA
Protein Sequence
MKSYLVCFLVLSLTYGVQSWDKDELEIFDLVEEINKNFYEVMGISQDATGQEIKRAFRNLSIVLHPDKNSAEDANIQFRNLVSIYEVLKDPSKREKYNKVLKDGLPNWKSALYYYRRMRKVGLYEGALIIFVIISVGQYMFSWAAYLEKKYTAEQVFGSRLKKLQKKNRNIDLDAILNEIPPPSILNTLPFQIPLFFWNLPSTIKSGVLKANELKEAALEKRRLEAEEIKRQQELEEEFEEMARARKEKKENIRKRRQATKAPEKTDAELAGYSRIEAKELTEKDTMKPVTQKTTPLSGGFWTDEDLTELIRLVKKYPGGAGSRWEMIAETMNRSVQEVTFMAAKMKENGYRIPGQTDSVAETIVQDVEKKKEKIKKVDKTILIPEKNWSQEQQRALENAIVKYRKAAGSDRWQKIANCVPEKTKEECLLRYKHLCDLVKSQKTKKAAGSEEDKNDEEDEKIVEPTSQNVEDVLEDDDAQADIEEDDQDELKPASEEQTKNKGKKRNKRKERKRMREFSSDEDTGDEVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01396454;
90% Identity
iTF_00188039;
80% Identity
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