Pros043455.1
Basic Information
- Insect
- Platycheirus rosarum
- Gene Symbol
- -
- Assembly
- GCA_963971375.1
- Location
- OZ020510.1:16510692-16572113[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-10 2.9e-07 31.7 0.0 1 38 784 822 784 827 0.89 2 4 7.4e-13 7e-10 40.0 0.1 2 39 839 876 838 879 0.94 3 4 3e-17 2.8e-14 54.1 0.0 1 45 893 938 893 938 0.98 4 4 6.8e-19 6.4e-16 59.4 0.0 1 44 945 989 945 990 0.96
Sequence Information
- Coding Sequence
- ATGGATGAGAATGCCAGTGAAGTTCTGCGAGGAGAAAGTCAATTAGATTCACCAGCCCCACAATATGAAATACCACAACACCACTACAGGAGGAGAGAGGTTCCAATCGTAGCATTTGCTGCATTTCTGACAGTTCAGTCAGACTTTTTGACACCACAATTCAATCTGGACATGTTAAAGGCTCAATATCTTCCCGTTGGATTATCTGGAATGAATTTCACAGCTGATGATGCAAGAAAGATACTTGAACAGAAGTGCGAAACAAATTCCGGAGGAAATAAAAGTGTTTTCGTAAATGCACGCGCAGGCGTTGCCGAGTTTATGAATTGCATAAATGGTTATGCTAACCTGACAGTAATCAAAGAAGAAATGGATCTTGCAAAACCAATTGGTGAACTAGATACGGTGTTTCAAAAGTATTGTGACAAGCGTCAGGAAGCTGAAATGTGTTTTGAAACTTTCATGAAGAAAGTTGAACCATGTTTGACTAAGGATGAAAAAGAACATAAAACTAACATCGTGCAAGTCGCGTCAAAAATGCTCGGATTGGTCTGTCGTAAAGGAGGTGATCAAATTGCTCTATTTGTTTCTGAACAAGGTCCAGAATGTCTGGAAGAGCATAAAGTAAATATCAGCAATTGTGTGAATGAAACATTTGCTGGATATGTTCCAAAGGAAATTGCCCAGAGTGCACATAATCTGCCGAATCTTGTGTTGGGCAAGAAGGAATGCAAGGATATTGATGACTTTGAGAAATGTGTTTTGGTTCATCTGGACAAGTGCAGTGATATAACACCTGGGAACATGGTGGAGGCTATGTTCAGATTTATTAAGAACGAAACCAAATGTGACCTTCTACACTCTATGCCGCTAAGGGCTGGAAATGGAGGAACATCGGTTGGTCTTCTGCGGACTGCTGAGCAATTGAAAATCAAAGGGCTTTGCGAAACAGCCGAAAGTGTTGATGAGGCAGAGGCGGCTACAGCCACCATCACATTATCAGAGAACATAACACAAGCGGTTGTTGGAAATATTGTGAATTCATCACAGGGTAATGAAATAGTCACTACACATACAAttgaaaacaacacaaataCGCATACAACATCAGCAAACCTACAAAATAGTAACAATAacattaattcaaatattaatgcAATAGTTGCCGCCCCAACGGCCACATCGACCCCACAATTGCGAAAATCTCGGGTCAGAAAACGTTCAAAGTCCCCGGATGCGAAccatcagcagcaacaacaacaacaacagcaacaccaacaacagcaacaacatcagcagcaacagcaacaccaacatcatcagcaacaacaacaacaaactatATTAAGTCAGTCCCTGAATACAGCGGCAATTGTAAGTCTGCAACAGACTTCGTCTGGGAACTATATACCAGTTTCTGGAGGGCAGACGATAACAACGACTGCTGTTAGCCAACACAGTTCTGAGGATTCGAGTTCTGACAAGCCAAGTGCTCAGAAAATCTGCAAAACTGAAGCGGCTAGCTCACCGTCATCGAATAATGGCAGTGTAACTGTCGCACCAGGAACAGCAATTGTAACACAAATCGTTGTAGCCCGAGACGTTAAGGACAATAAGAACATGACCAGCATAGGAATGGGAATGAACGGCGGTCTCCTCGGAGTACCAATGGGCTTCTTAGATTTCGCACCCGAACCACCAGCACCATCTGCAACACCTGTAACGGTGACGGAACACGTCGATTTGTCGTGTAACCCCAGCCAGGATACCAGAGATTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAACACATGATCCAACGGCTTGATCAGTCACCGATGCATGCGATCCACCATCAGTCGTCCACTGGCGACGAAAGTAATTCTAATCTAATTCAGCATATTAAGAGCGAAGTGATTGAGGTGAAGCATCATcatcaacagcaacagcagttGCATGCGCAAACCTTATCACAGCAAGGACAATctcagcaacagcagcagcagcaacaacagcaccaacagcagcagcagcagcagcatcaacaacaacagcaacaacaacagcagcaacaacatcagcaacatCAAGATATTTCTGGAGCAACTGTTATGGAAATTGATCCAAGTAATATCAAACACGAACCAGGAATGATTATTACACCGGAAATCGTCACAATGATGGCAACGGGTCATATGgATATATACTCAGATGCCAGTGAGGATTCATTGATGATTGCAAATGGTTCCCCAAATGACAATAACGAGCCACACTACACAAATTTGGACCAACCACATGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCAGTGACGTATGGCATCCCATCGACAACATTATGGCAACGTGCCCATCGCATGGGCATCGAAACACCCAAAAAAGAGGGCGGTACCAAATCGTGGAATGAAGATTCATTGAACAACGCACTTGAAGCATTAAGAACTGGTCAGATATCAGCTAATAAAGCCTCAAAGGCGTATGGTATTCCGTCCTCGACACTATATAAAATTGCCCGACGTGAAGGTATAAGATTGGCGGCACCATTTAATGCGGCGCCAACAACATGGACGCCCGAAGATTTGGAGCGTGCATTGGAAGCAATTCGTGCTGGCCATACGTCCGTCCAAAAGGCTAGCTCAGAATTTGGTATACCAACAGGCACACTTTATGGTCGCTGTAAGCGTGAAGGTATTGAATTATCCCGCTCTAATCCGACACCATGGTCAGAGGATGCCATGAATGAGGCATTGAATTCTGTTAGAGTTGGACAAATGTCTATAAATCAGGCAGCTATTCACTATAACCTTCCATATAGTTCGTTGTATGGCCGTTTCAAGCGTGGCAAATATGACATTTCCAATACGAGTACTACATCAATCAACAACACATCGGGCAACACCAGCGGAAGCATTGAAATCATTGAACACAGTCCAGAGAATTCGTTGCACATGTTTCAGCAACAGTTCCAATACAGTCCAGCGCCCCAATCAAATCATCAGactcaacagcagcagcagcagcaacaacagcaacaacaacaacaacagcaacaacaacaacatcaacaacaccaACCACAACAACAGCATATTCATCAACAAGTGGTTCACATCCAACACCAACAAACACCACAACAACAccatcatcaacaacaacatatcCAACAACAAGATGTTGTTACCTCAACAAGTCAGGTTCATACCCAAGCTGGACAAATCCAACATATTTATCACAGCACTCCCGAGAGGAGTTGA
- Protein Sequence
- MDENASEVLRGESQLDSPAPQYEIPQHHYRRREVPIVAFAAFLTVQSDFLTPQFNLDMLKAQYLPVGLSGMNFTADDARKILEQKCETNSGGNKSVFVNARAGVAEFMNCINGYANLTVIKEEMDLAKPIGELDTVFQKYCDKRQEAEMCFETFMKKVEPCLTKDEKEHKTNIVQVASKMLGLVCRKGGDQIALFVSEQGPECLEEHKVNISNCVNETFAGYVPKEIAQSAHNLPNLVLGKKECKDIDDFEKCVLVHLDKCSDITPGNMVEAMFRFIKNETKCDLLHSMPLRAGNGGTSVGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQAVVGNIVNSSQGNEIVTTHTIENNTNTHTTSANLQNSNNNINSNINAIVAAPTATSTPQLRKSRVRKRSKSPDANHQQQQQQQQQHQQQQQHQQQQQHQHHQQQQQQTILSQSLNTAAIVSLQQTSSGNYIPVSGGQTITTTAVSQHSSEDSSSDKPSAQKICKTEAASSPSSNNGSVTVAPGTAIVTQIVVARDVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHAIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQQLHAQTLSQQGQSQQQQQQQQQHQQQQQQQHQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNTSTTSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQHQQHQPQQQHIHQQVVHIQHQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -