Pign142272.2
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- NFXL1
- Assembly
- GCA_036346225.1
- Location
- JARFIW010001336.1:8276447-8306468[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 2e+05 -8.0 5.6 15 19 169 173 168 173 0.81 2 18 0.25 1.7e+04 -0.7 0.8 4 10 204 210 203 210 0.95 3 18 1.7e-08 0.0012 22.2 14.5 1 19 218 235 218 235 0.99 4 18 5.9e-08 0.0039 20.5 16.5 1 19 271 289 271 289 0.95 5 18 4e-08 0.0027 21.0 10.1 1 18 324 341 324 342 0.97 6 18 3.4e-05 2.3 11.7 8.9 1 18 377 394 377 395 0.98 7 18 0.16 1.1e+04 -0.1 0.9 1 5 404 408 404 413 0.90 8 18 9.3e-05 6.3 10.3 17.1 1 18 429 446 429 447 0.94 9 18 1.7e-09 0.00012 25.4 10.5 1 18 456 473 456 474 0.98 10 18 0.75 5e+04 -2.2 1.2 5 10 502 507 502 507 0.93 11 18 0.0005 34 8.0 6.5 10 19 523 532 521 532 0.92 12 18 0.12 8.1e+03 0.3 5.4 3 12 543 552 542 552 0.88 13 18 1.2 8.1e+04 -2.9 1.2 15 19 581 585 580 585 0.83 14 18 0.00057 38 7.8 4.0 1 12 710 721 710 721 0.96 15 18 3 2e+05 -5.1 2.6 15 18 735 738 734 742 0.54 16 18 3.9e-05 2.6 11.5 17.6 4 19 752 767 750 767 0.91 17 18 2.4e-06 0.16 15.4 9.8 1 16 810 824 810 830 0.93 18 18 3 2e+05 -4.2 1.0 6 10 860 864 860 864 0.95
Sequence Information
- Coding Sequence
- ATGAGCGGATTTAACAGAAATAAGGGTCCAACAAACCCATGGCACAAGAATCGCCCGCCACGCAAACCGCCTTCTTCACAACATAACCTCACAAATCGATCGGCGAACTCCGCTGAGAAATTCAAAGAAGCACAAAAGCAGTATCAGGAAGCAGCTCAAAAGTTTGTCAAAGAGTACGATTCATCCGAAGAGGaagaagatttagaaaccaaCAACATAATCGGGTCTATTTTACAAAAGTACGGCCAAAGTGGCATTGATAACGCTAGCAATTTCACTAAAACGCAGTCGTTTCTAGAGGATTCCTTTCTATCAGCATCGACAGTTTGTCTTGTATGTTTATCGTCAGTCAAGCGTTCCGAACCGATATGGAGCTGTTCGATGTGTTATTGCAGCTTCCACCTGATGTGTATACAACGCTGGTCGAAAGATACAATAGCACAGCAAAAGTTAGCGTTGGAAGGGGTAATTGTAGCTCGTCCAACTTTAGATATTACATGGTGCTGTCCAAAGTGTCGTCAGAAGTATGACACAAGTGATATTCCAAGCAAATACgaatgtttttgtaaaaaaacgACTGATCCTGTTTTTCAACCCTTTTTAGTTCCTCATTCGTGTGGCGAGACTTGCGATAAAGATTTGAAGCCGGCGTGTGgacataaatgtattttattatgtCATCCAGGTGCATGTCCTCCATGTCCGACGACAGTAATTGTTAGTTGTTTATGTGGTTCTCAACTTCCACGCGTTCAACGATGTAGTAATCGTGAATGGTCATGCGGCTCGCCTTGTAATAAGCTGCTACCTTGTAATAAACATAAATGCACACAACCATGCCATGCTGGTGACTGTCCGCCATGTCCTAAGAAAAGTATTCAAAATTGTATTTGTGGGGCCAATAAAAAACTACGTGATTGTATGACACCTATTTGGCAGTGCGATAATgtGTGTGATAAACCGCTAGATTGTGGATTTCACAATTGTTCCGAAAAGTGTCACGTTGGTGAATGTGACACGTGCGAGTTATCCAAAGTACGCTTTTGTTCGTGTCGGAAGTCGACGTATATTCTACCATGTACGGAAGAAACACCAACGTGTGGAGATACTTGTGCTAAAACCTTAGATTGTGGTATTCATATTTGTTACCAACGGTGCCACAAGGATAGATGTGGAACGTGCGCAGAGACTATTACAAAATCCTGCCGTTGTGGTCAGCACACCAAAGAAGTTCAATGCAAAAAGCCATACCTTTGTGAGACCAAATGCAAGAAAATTAAAGACTGTAATAAACATCCATGCAATCGGAAGtgCTGCGATGGAAATTGTCCGCCTTGTGAAAAGCCTTGTGGCCGCACTCTAAGCTGCAGCAACCACAAATGCAGCTCAATATGTCACCGGGGACCTTGTTACCCTTGTGCTTTGACCGAAACGGTATCTTGCCGATGTGGAAAAACAATTATAACAGTTCCTTGTGGTCGTAAGCACAAGACGAGACCGCCTAAATGCAACGAGCCCTGCTTGATACCACCTGATTGTCACCATGAAAAACGCGACCTACATCGTTGTCACTTCGGTGATTGTCCGCCGTGCAGAAAAGCATGTAATAAAAGTTTAGCGAGGTGCGAACATATTTGTCCAGCGCCTTGTCATTCAGCAGTTCTTGTTAAAGTAGAGGGACAGAAACCGTCGATGCCGTGGGAGCAGACAGAACCACAGGTGGAATTAAAAGCGCTTGCTTGTCCAGAGTGCAAAGTTCTAGTACCAGTCACGTGTTTAGAGCTTGAAGTCTTCCAGTCTTCTAGCTTGAGCTCTCAAGCATTCTTAGTAGAAACATCCTACTTTCGCATAGCTGATGACTGCTATCGTTCAGGATCTCCACTACCATATCAGCATACACGATATTTCATAGGGTTGGGCCTAGGACAGATCCCTGTGGAGGTAGCCTTGTCGTTTTCCACAGCTACCTCTAAACCAGGATCCTCAATTTCCATATCATTGTGCAGGTTATTCCACAGGGTTGGACCCAAATTAGATCGCTTGGGAGGTAAACATGAAACGTCAAACTGGCCATGTCACATCGCCAAGGAAACAACGTGCGGCCGACAATGTGGTCGACTTCTAATATGCAGTAATCACCGCTGCTCCTTCGAGTGCCATTCTGTCACAGCTGCGTCTAACGAGATTACTGCCGGAACGAATTGTGAAACGTGCACTAGCAGTTGCGCAAAACCACGTCCTGAAGGCTGTACTCACATCTGCCCAAAACCATGCCATCCAGGCTCGTGCCCACCATGCAAACAAATGCTGCGCATTAAATGTTACTGCGGCCTTAGCCAGCCGTACGTCGAATGCAGCATCTGGACGTCCACCGCAAACACCGAAGCTTTACAAAGCTGCAGCAACCAGTGCCCTTTGAATtaCGCGTGCGGCCATCGATGTCGTTCCAACTGCCATGCAGGTCCATGCCCGAACGCCATTCTATGTAAAAAGAAAGTTAAGATCGCCTGCAAGTGTAAACGGCTTAAGAAAGAATTTCCGTGCGACGTAGTACGATTGAACTTGCCTAAAGTCGATTGCGACGAAGTTTGTTTACAAAAACAACAGGAGGAACAACACCTGAAGGAACTCGAAGACGGCCAAAAGAAGAAAGAGGAAGATTTGCGCAATCTCAGGGAGCTTGAGAAGTACGAAAAACGATTGCAAGGGAAGAAGAAGACGAAAGAACGTCGTGTCTATAATAAGTCTGAAGAGCGTTCGCTGTTACGCAAGGAAGTCGATGAAGGACCTGGGACAGATCTCCAAGGCGGTACGTCTGGAGATGGGCAAGCGGCGCTAGGAGTTTGA
- Protein Sequence
- MSGFNRNKGPTNPWHKNRPPRKPPSSQHNLTNRSANSAEKFKEAQKQYQEAAQKFVKEYDSSEEEEDLETNNIIGSILQKYGQSGIDNASNFTKTQSFLEDSFLSASTVCLVCLSSVKRSEPIWSCSMCYCSFHLMCIQRWSKDTIAQQKLALEGVIVARPTLDITWCCPKCRQKYDTSDIPSKYECFCKKTTDPVFQPFLVPHSCGETCDKDLKPACGHKCILLCHPGACPPCPTTVIVSCLCGSQLPRVQRCSNREWSCGSPCNKLLPCNKHKCTQPCHAGDCPPCPKKSIQNCICGANKKLRDCMTPIWQCDNVCDKPLDCGFHNCSEKCHVGECDTCELSKVRFCSCRKSTYILPCTEETPTCGDTCAKTLDCGIHICYQRCHKDRCGTCAETITKSCRCGQHTKEVQCKKPYLCETKCKKIKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCSNHKCSSICHRGPCYPCALTETVSCRCGKTIITVPCGRKHKTRPPKCNEPCLIPPDCHHEKRDLHRCHFGDCPPCRKACNKSLARCEHICPAPCHSAVLVKVEGQKPSMPWEQTEPQVELKALACPECKVLVPVTCLELEVFQSSSLSSQAFLVETSYFRIADDCYRSGSPLPYQHTRYFIGLGLGQIPVEVALSFSTATSKPGSSISISLCRLFHRVGPKLDRLGGKHETSNWPCHIAKETTCGRQCGRLLICSNHRCSFECHSVTAASNEITAGTNCETCTSSCAKPRPEGCTHICPKPCHPGSCPPCKQMLRIKCYCGLSQPYVECSIWTSTANTEALQSCSNQCPLNYACGHRCRSNCHAGPCPNAILCKKKVKIACKCKRLKKEFPCDVVRLNLPKVDCDEVCLQKQQEEQHLKELEDGQKKKEEDLRNLRELEKYEKRLQGKKKTKERRVYNKSEERSLLRKEVDEGPGTDLQGGTSGDGQAALGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -