Basic Information

Insect: Platerodrilus igneus
Gene Symbol: -
Assembly: GCA_036346225.1
Location: JARFIW010000796.1:3860885-3868060[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.006 3.3 11.7 0.2 1 23 82 104 82 104 0.97

2 22 0.0091 4.9 11.1 0.5 1 23 217 239 217 239 0.98

3 22 0.32 1.7e+02 6.3 5.2 5 23 260 278 257 278 0.93

4 22 0.0055 3 11.8 2.4 1 23 284 306 284 306 0.99

5 22 4 2.2e+03 2.8 0.2 1 23 358 381 358 381 0.78

6 22 0.0069 3.8 11.5 0.1 2 23 388 409 387 409 0.97

7 22 2.6 1.4e+03 3.4 4.6 2 23 417 438 416 438 0.97

8 22 0.041 22 9.1 0.1 2 23 711 733 710 733 0.95

9 22 0.0027 1.5 12.8 2.3 1 23 737 759 737 759 0.99

10 22 0.00018 0.096 16.5 1.5 1 23 802 824 802 824 0.98

11 22 0.0018 1 13.3 4.2 2 23 830 851 830 851 0.98

12 22 0.069 38 8.3 3.1 1 23 1032 1054 1032 1054 0.98

13 22 0.026 14 9.7 2.4 1 23 1259 1282 1259 1282 0.96

14 22 0.0065 3.5 11.6 0.3 1 23 1344 1365 1344 1365 0.97

15 22 0.42 2.3e+02 5.9 1.8 1 23 1693 1716 1693 1716 0.96

16 22 0.013 7.3 10.6 0.8 1 23 1719 1742 1719 1742 0.96

17 22 6.6 3.6e+03 2.1 0.1 3 23 1750 1770 1749 1770 0.90

18 22 1.7 9.2e+02 4.0 0.5 1 19 1833 1851 1833 1856 0.88

19 22 0.061 33 8.5 0.4 3 23 1864 1884 1863 1884 0.97

20 22 0.6 3.2e+02 5.4 4.3 2 23 1889 1910 1888 1910 0.97

21 22 0.13 68 7.5 0.6 2 23 1970 1994 1969 1994 0.93

22 22 0.018 9.9 10.2 2.1 1 23 1999 2021 1999 2021 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.006	3.3	11.7	0.2	1	23	82	104	82	104	0.97
2	22	0.0091	4.9	11.1	0.5	1	23	217	239	217	239	0.98
3	22	0.32	1.7e+02	6.3	5.2	5	23	260	278	257	278	0.93
4	22	0.0055	3	11.8	2.4	1	23	284	306	284	306	0.99
5	22	4	2.2e+03	2.8	0.2	1	23	358	381	358	381	0.78
6	22	0.0069	3.8	11.5	0.1	2	23	388	409	387	409	0.97
7	22	2.6	1.4e+03	3.4	4.6	2	23	417	438	416	438	0.97
8	22	0.041	22	9.1	0.1	2	23	711	733	710	733	0.95
9	22	0.0027	1.5	12.8	2.3	1	23	737	759	737	759	0.99
10	22	0.00018	0.096	16.5	1.5	1	23	802	824	802	824	0.98
11	22	0.0018	1	13.3	4.2	2	23	830	851	830	851	0.98
12	22	0.069	38	8.3	3.1	1	23	1032	1054	1032	1054	0.98
13	22	0.026	14	9.7	2.4	1	23	1259	1282	1259	1282	0.96
14	22	0.0065	3.5	11.6	0.3	1	23	1344	1365	1344	1365	0.97
15	22	0.42	2.3e+02	5.9	1.8	1	23	1693	1716	1693	1716	0.96
16	22	0.013	7.3	10.6	0.8	1	23	1719	1742	1719	1742	0.96
17	22	6.6	3.6e+03	2.1	0.1	3	23	1750	1770	1749	1770	0.90
18	22	1.7	9.2e+02	4.0	0.5	1	19	1833	1851	1833	1856	0.88
19	22	0.061	33	8.5	0.4	3	23	1864	1884	1863	1884	0.97
20	22	0.6	3.2e+02	5.4	4.3	2	23	1889	1910	1888	1910	0.97
21	22	0.13	68	7.5	0.6	2	23	1970	1994	1969	1994	0.93
22	22	0.018	9.9	10.2	2.1	1	23	1999	2021	1999	2021	0.96

Sequence Information

Coding Sequence: ATGGCTTTGAACAACCACATCCACAACAATTTTAATCTTAGTATTCCTGATGGTTTACATTTGTTAGATACTACATCTACCCTTCCAATTGTAAAAACTGAAGAACTGATAATGGATGAAGTTGAAATTAAAAAGGAAATTGAAGCAAATGAACATTCAGACAATGTTTTGTTTCATGGcaaatattatttcaataaaaattgtcCTACAGCTGAAGTTGTAAAAACTGACAAGGGTTACAGATATAGCTGTTTAATATGTTATGATCAATTTTCATCACcggacaatttagaaatacaTCTAAATAATCATTATGAAGACGGTGATCTTGATAGTATTAGTAAAGAAAACCTTTTAGACATAAAATCTTTGCAGGTAGATGGAATGGACTTATCGCTTAATGGTAAGAATAACTTTATTAAATCAACCACATCAATAAATGGATATTTGAGAAATGTTTCAAATCAGGATGATTGTAAAGAATCTGTATTACAcgattcaaaattattttctaattctTGTGATTTTTCTGCATCAAATCAAACCATTCTAGATTGTCATGGAATTCCACATACTggtgaaaatgattttataagtGATTTAACTCAACCAAAAACTGAAAATGttaattatgaaattgaaaacttGTATCAGTGTTTATCTTGTGAATTTTCGTCAGCTTTACAAAGTGAACTGAATAAACATATGGATACACATACATCGAAAAGACGTTTATCTAACAGTACTATAGAAAAATTACCATCACTGGCATGTATTTTGTGTTCAAAACATTTTCGTACTACGAGACAACTCCAAAGTCATATTAAACATCATAAAGCCGAAACCACGTATAAGTGTTTTACCtgtaattttattacaaaacagaaaaatatgttaAGTAGACACATTAATATACATACTAATAAAAGGCTTGCTGAACGAATCACAAACGATCACATCGATTCGTTGGTAAAGCATGTCGAACGCACATTAATATTAGATAATGCTACCGATAACAATAGTAATGACTCTGAAGTAAGTTTTATCacatttgattttataaaacgTATATATAAGTGTAGCGAATGTAACTATTCAAATTCTGTTAAGGCAAAAGCGTTAATGCATGCGAGAGTGATCCACGAAACAGCTAAGACCATTACATGCCAAGAAtgtcaaaaaaaatttgcttcagAAATCATATTATCTGCACACATGCGAATTCATAAAATGAAATCGGATGAATTGAAGTGTTTTAATTGCTCATTTACATCTACCCAAAAGAAATCTTTGGAGTGTCATATGATTACACATCAGAGACGGAAATCTCACCGTAAGACTAGAAATAATCATGTTGTAATAGATCGTTCCGATAGTGAAGATGATGAAAGTGTAAATGTTAACGATCGACAAACAGAAAGCGACATAATTCCTTTTATAAATGATTGCACCAGCAAAACAACATCtgaattagaaaattttaaattttttacagttattcagGATAACAAAGTTTGTGCCGTAGTAGATGAAGTAGAAGAAATTATTCCAGAAGCAGAAGTTGAAGACGATGCTATATtacaacctattaattttgttgacGTATCTGTAAGTAATGCAGACGATTATACGTTTAATGCTTGTATGCAAGTGGCAGATGATGAATCTCAAATAGGTGATGCGGATGCTACTGGTTTTGATTCGTCTGCTGAAGAAGAGTTtcgtAAAGCACATAATAAGAAAGAAGCTGTTCCTGTATCGGACAAAGAAAATTGTCCTGTATCAGATAAGGAAGCTTGTACTGTATCAGATAAAAAAGATTGTCCTGAATTAGATAAAGAAGCTTGTTCTGTATTAGATAAAGAAACTTCAGAAATATCTAATCAGAAAGTCCAGCCGGTATCAGAAGTTACGGAAAcagaatcaaaaaaattaaatcaggaAGTTCAGCCTGTATCGAATACAGAAGTTGCGGAAATAGAAGTGAAAAAATCAAACGGAGGTAATTCAGGAAGTGACACTAATATTTCTGCGAAACATTCATGTAAGTCTCGGAAAGTAGCGCGTATTTCTGAAAATAGTTGTGAGGAGGATGTGGTTTCTGTTACTGATTCATCCGATGATGAACTTGAATGTACTTCATGTTCTTACTCAGCAGAGAGCCGTGGGGATTTGGAGAAGCATATAAGGGAGTTGCATAGAAAAAGGTTTCGATGCAATACTTGTCTTAGATCTTTTATGAGAAAAGGTGTTTTTTTCGCACATTTAAGGACTCATTCAGAAACTCCTTCCAACACTGCAAACACCGTTCTAAATATAGTACAATTAAATGTTAGTAATAAAGTAATTACTCCTGTAAAAGACACAAATAAAAATCACAGTATTGGTTGGTGTAGAAAAGATTTCAAGTGTCCCACTTGTCGAAAATTCTTTATGACTAAATCTGCTTTAGTATCACATGCAAAATCTCATCAAAATTCTCCTGAAAAATGTCACACTTGTCAAAAATTGTTTAAGACTAAATCTGCCTTAATATCGCATGAAAAATCTCATCGAAATTCTACCGGAAATATTGGTTCAAGTACATCTTCAACAGTAAATGATAGTACTGCAAAAAATACTTACAGTAATACACCAACTAACGTGcttttaaaagaattattatcagGTATTCAAATCAATAATGTATTAAATGAGATTAACAAAACTGTAGggagtaataaaaaaaaatctaatgaTGTTATACTTATCAATAGCAGTGATGATGAATGCACTAAGGAGGCAACTCCTTCATTAATGACAGATAAAAATTTGTCTCAATATCTACTAGTTAGATACTTGTTAAATCTTGCAACGTCGAAAATTATTGCTCCTACTCTTGCAAATACCAGCATCTCACAAATAATAGATAAATCTAATACCAAAAAGCAAACACAACCCGGGACTTCCAAGGTAACTGTGATAAACATCagtgacgacgatgatgatggtACCAATTGCGTTATTAATAAGCAGGCTGATATTGCATCCAAATCACCTTTGAAAACTTCTGACAATCTAGAATTTAATAATTCGCAAATGAATTTATCGAATTTCTCTTGCACAAGTTGCAATATAAAATTTATGGACATAAATACTTTACACGAACATATGAAAAAGCACAAAGACAATAGTGATCAAGTCAATGAACAGACTATTTTGCAAGGGCAGCTTGGTGAGAAGATATCCCCGTTAACCAGAAAACCTgacatttcaaataatcaaaCATGTATAAACAAAGAGAGCAGCAAAAGTGCCACCACATCAAGTCCAAGCGAAACCATCTCAACCCCTATGTTGGATAAATCATCCAATATCAATACTGGAAATGTAGATTTTGTTACTCTGGAAGATGACCTTGCTAGAGTTTCAAATGAAAATTGTGTAGTACAGAATTTGGAAAAGTCTCATGTCGTTGTAGATAGTTCTAATGTAGCCAACTCCGAAACTGCTACTGTATCAAAATGTACAGCATCATTTCAAGAGCCATCTTTGGAGAAGTTTTATATTCCTGAAGGTAACACGATCGAAAAAGTAGTCGATGCAGAAACTGTTACCGCTGTGAGATGTGTATCACTTCAAAAACCGCTTTTAGAAAAGTCTTGTGTGTCCGAAGATAGCAGGCTGATAGCGGTGGAAGAGGTACCTGTTAGTTTAGTGGAAGCTGCAGCTTCAGTTCAGGAATGTACTGAAAATGCTTTAGCTACCCTGCAATTTGATCAACCTGATACATCTTATTGTTGTACACATTGTAGCTTTTCCACGGATTCCGATTCTAATTTACAAATTCATATTGCAAGTGCACATGGTAAACAGGTTGAATGTACTGATGGCGGTGGGGTACTTACAAATGAAGATTTGTTACAATCACATAAAAAAAACAATCATAGCATTTTGAATAAGGACGAAAAACACATACGATATTCTGAAAGCCAATCGAATAAGAGCACAAATAATATTAGCGAAGGAAATTTACCATTAGAAAAAACGTTTATTTGTGCTATTTGCGAAATGACATTCTTTTCAAGCAACTTTGAAGCACATATAAAAAACCATTTTGATGATATTCTCAAAAAGAGTAAAACAAATTCAGAGTTACAAAAAATCATGGAAGATAAGTTATGTAAAAAAGTGTCTGTTTCAAGCGGTGTTAATGAATATCAAGTTAAGGTTACAACTGCTGACGATACATTGGCACCGAGTACGACTACTACAAAACTGGAAACCGTAATAGAAACATCAAATAATCCATTGGTTTTAAACGGTAATATTAAAGAAGATCGagtagaagcagaaataggaaataAATCTTTAGTTTTGCACGAAACGGTGAATGAAACTTTAAACAAGAACGAGCCTGTTTCTCGAAGTACAACTGAAAGTATTCAAAACGTTAACAGATCTTCCAGCATTGATAATTTAAACATTGCTTTATCAAAGGGTAACTCAGCAGCATTTTCCAAAGTACAAACAACACCTGAATGTGCTACTTTGGAAAATAGCATCTTGCGTAATATCGCCAGCTTTGTAAACTTACTAGCaacagaaaagaaaaaagataaagtaACAAGTAGTGGTTCGGCTGAAAATAGTACAAATACAACCTCAAAAAACGATGTTGAACCTGCaactataaataaattagaattaaattctCAGCCAAGTATAACCAATTCTAATTTGACAAGTTCACTACAAAGTCAAGGATCGTCAACTTCTCAAACTGATGTAGCGGCTGTAACTAATAACAAATCCGAACCGTTAAATAAGttgaatatattatataatgCAACAGTACCTGTTGCAGAAACTGATGATGTTGTTATTGTAGAACTAAAATCTCAAACTGATTCTGATATAATTATCCTTTTTGATACCGACGATTATACTGTGATAAATCATCATAATGAAACTCAATCTAATGCAACTGCCCAAGCTGTAAACGTTGCAAATACAAACAATGATTCCAAGATTTGTATTTTGAAAAAAGAACAAGACCTAAGTATTTCTCACGAGCGGTCTGAGGCTATGTATCCATATAAATGTGAGGAGTGTTCATACGGTTGCGTTACCTCAGCTATCTTAGCACAACATCGTCGACATGTACACAGTACATTTGTATGTAGTGTGTGTAACAAaaagtacctttacctgtattcgCTACAGACACACATGGCAATATATCACCAGAATGTTATATTTAAGGTATGTGTtagttgtgaattttatacaataaGTGTAGATGATTATAATAATCATGTGCGAACACATGAAGCTAAAGTGGTATTTGTAGACGGTAAGGATATAGACAAAATCTCAGGTATACAGGAAAGGAAAGACAGCGGTAATCTAGAAACTTCAAAAGTTACATGTGACAAACCAAGAGAACCTGCAGGGACATCCGAAAATACCAAACTTGATAGTAAGATAAACACACTAGTTGTTCCTAATGAACAACATCCCTGTTCCAAGTGTGAATATGTTTCAACTACACTCAAGGGGCTTTCGATACATGATAGACTGGTTCATGGTAGAGGAGTACAACGATTTTGTACAATTTGCAATGCTTCATTCATGTCTGTATTAACTCTAAAATTACACATGGAAAGTCATAGCAGCTATATAAAGTGTTTACAGTGTAAATATAGAACAAAGCATAAAAGACAAATGGTATCGCATGTTCAAACCCATCGTGCGGTAGAAGTTAAACAAGAAAATGAAGAAATTGAAAGTAATATATTGAAAAAACGTATGCGAACTTGTAACATTGGTAACAGTGCAGAGTACGATAATCACAAAGATGGTAATTTGGAAACTACCAAGAGGAACAGACATGATAATATTGGGTCCGAAAGGAGTCGAAAAATGCAGTGTGGTGCTAATAAGTGTAAATTTACCACGATTTCAAAACGCAGTTTATTAGCCCATATTAAGAAGGTTCATTGTAATAAACAACATATTTGCACAACATGTAGTAGTAGATTTTCTACAGTTAAGgcattaaaaatacacatgaaagATCATTTACTGAACTGCATAGTCTGTGAGTTTTGTACAGGAGATAAAAATATACTAGACGAACATATGAATGATTTTCATTTCAGCAAACGTAATGTAAGGTCTGCAAAAAAACATATTTCAATATCTACTCAGAAAACTGCCATCGATTCAATTGAAGATTTAATATTACCTGTTGTTGTAAGTAAACACGTGTTAGATATACCTATGGTAACCCACAGTCAACTTCTTACCACATCTTTAGATAATAAACAAGCTAAAACAAACTCGCAAAGgaaatacaataataaaacatCACCAACTAAAGTAACAAGCAAATTCAAATCTAAAAGTtccaaaaagaataaaaaatcttCGAAATCTTATAaagttttcaacaaaaaaaagacTGTTTCGATCCCTGCTTTTGCAAATGAAAAATGTGTTACCCTTAATGATTACAAAGATAACGTGAATATGTGTACAAAACCTAACGAGGATGACGTTGAGGAACTTCTCACACcacataatattaaaattacaaaccaACTACAGCAACACGCAACTGATAAATCTACTATACCAGAGACAAGTAAATGTGAAAAAGAAGATCAGAAGGTCACGAGTGTATTAGATGCTGTCTCTAACAGCGGTCAGGCTTCAGCTTTGAATTTTGATGATAGTTGCAAGGTTTTGAAGACCGATCTGACAACTAAAAGAAAACGCCACCAGAATAAAAATGTTACTCATGTATCTAAGGAAAAGGTAGAAAGAGATGATTCTCCAGTACTGAAACCGTCCATTATTATGCGGCAAATCAAAAATCGTAAAGCTTCTTCAAAACTACATAAAAAAAGAATACAATGA
Protein Sequence: MALNNHIHNNFNLSIPDGLHLLDTTSTLPIVKTEELIMDEVEIKKEIEANEHSDNVLFHGKYYFNKNCPTAEVVKTDKGYRYSCLICYDQFSSPDNLEIHLNNHYEDGDLDSISKENLLDIKSLQVDGMDLSLNGKNNFIKSTTSINGYLRNVSNQDDCKESVLHDSKLFSNSCDFSASNQTILDCHGIPHTGENDFISDLTQPKTENVNYEIENLYQCLSCEFSSALQSELNKHMDTHTSKRRLSNSTIEKLPSLACILCSKHFRTTRQLQSHIKHHKAETTYKCFTCNFITKQKNMLSRHINIHTNKRLAERITNDHIDSLVKHVERTLILDNATDNNSNDSEVSFITFDFIKRIYKCSECNYSNSVKAKALMHARVIHETAKTITCQECQKKFASEIILSAHMRIHKMKSDELKCFNCSFTSTQKKSLECHMITHQRRKSHRKTRNNHVVIDRSDSEDDESVNVNDRQTESDIIPFINDCTSKTTSELENFKFFTVIQDNKVCAVVDEVEEIIPEAEVEDDAILQPINFVDVSVSNADDYTFNACMQVADDESQIGDADATGFDSSAEEEFRKAHNKKEAVPVSDKENCPVSDKEACTVSDKKDCPELDKEACSVLDKETSEISNQKVQPVSEVTETESKKLNQEVQPVSNTEVAEIEVKKSNGGNSGSDTNISAKHSCKSRKVARISENSCEEDVVSVTDSSDDELECTSCSYSAESRGDLEKHIRELHRKRFRCNTCLRSFMRKGVFFAHLRTHSETPSNTANTVLNIVQLNVSNKVITPVKDTNKNHSIGWCRKDFKCPTCRKFFMTKSALVSHAKSHQNSPEKCHTCQKLFKTKSALISHEKSHRNSTGNIGSSTSSTVNDSTAKNTYSNTPTNVLLKELLSGIQINNVLNEINKTVGSNKKKSNDVILINSSDDECTKEATPSLMTDKNLSQYLLVRYLLNLATSKIIAPTLANTSISQIIDKSNTKKQTQPGTSKVTVINISDDDDDGTNCVINKQADIASKSPLKTSDNLEFNNSQMNLSNFSCTSCNIKFMDINTLHEHMKKHKDNSDQVNEQTILQGQLGEKISPLTRKPDISNNQTCINKESSKSATTSSPSETISTPMLDKSSNINTGNVDFVTLEDDLARVSNENCVVQNLEKSHVVVDSSNVANSETATVSKCTASFQEPSLEKFYIPEGNTIEKVVDAETVTAVRCVSLQKPLLEKSCVSEDSRLIAVEEVPVSLVEAAASVQECTENALATLQFDQPDTSYCCTHCSFSTDSDSNLQIHIASAHGKQVECTDGGGVLTNEDLLQSHKKNNHSILNKDEKHIRYSESQSNKSTNNISEGNLPLEKTFICAICEMTFFSSNFEAHIKNHFDDILKKSKTNSELQKIMEDKLCKKVSVSSGVNEYQVKVTTADDTLAPSTTTTKLETVIETSNNPLVLNGNIKEDRVEAEIGNKSLVLHETVNETLNKNEPVSRSTTESIQNVNRSSSIDNLNIALSKGNSAAFSKVQTTPECATLENSILRNIASFVNLLATEKKKDKVTSSGSAENSTNTTSKNDVEPATINKLELNSQPSITNSNLTSSLQSQGSSTSQTDVAAVTNNKSEPLNKLNILYNATVPVAETDDVVIVELKSQTDSDIIILFDTDDYTVINHHNETQSNATAQAVNVANTNNDSKICILKKEQDLSISHERSEAMYPYKCEECSYGCVTSAILAQHRRHVHSTFVCSVCNKKYLYLYSLQTHMAIYHQNVIFKVCVSCEFYTISVDDYNNHVRTHEAKVVFVDGKDIDKISGIQERKDSGNLETSKVTCDKPREPAGTSENTKLDSKINTLVVPNEQHPCSKCEYVSTTLKGLSIHDRLVHGRGVQRFCTICNASFMSVLTLKLHMESHSSYIKCLQCKYRTKHKRQMVSHVQTHRAVEVKQENEEIESNILKKRMRTCNIGNSAEYDNHKDGNLETTKRNRHDNIGSERSRKMQCGANKCKFTTISKRSLLAHIKKVHCNKQHICTTCSSRFSTVKALKIHMKDHLLNCIVCEFCTGDKNILDEHMNDFHFSKRNVRSAKKHISISTQKTAIDSIEDLILPVVVSKHVLDIPMVTHSQLLTTSLDNKQAKTNSQRKYNNKTSPTKVTSKFKSKSSKKNKKSSKSYKVFNKKKTVSIPAFANEKCVTLNDYKDNVNMCTKPNEDDVEELLTPHNIKITNQLQQHATDKSTIPETSKCEKEDQKVTSVLDAVSNSGQASALNFDDSCKVLKTDLTTKRKRHQNKNVTHVSKEKVERDDSPVLKPSIIMRQIKNRKASSKLHKKRIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -