Basic Information

Insect: Platerodrilus igneus
Gene Symbol: RREB1
Assembly: GCA_036346225.1
Location: JARFIW010000771.1:4020674-4025395[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.4e-05 0.024 18.4 0.8 1 23 26 48 26 48 0.99

2 16 1 5.6e+02 4.6 1.9 2 23 61 82 60 82 0.95

3 16 3.4e-05 0.018 18.8 5.6 1 23 88 110 88 110 0.99

4 16 0.7 3.8e+02 5.2 0.3 1 23 188 212 188 212 0.91

5 16 0.0018 0.98 13.3 1.6 2 23 218 240 217 240 0.96

6 16 0.13 69 7.5 0.8 1 20 289 308 289 309 0.94

7 16 0.058 31 8.6 0.1 1 23 445 467 445 467 0.96

8 16 3.7e-05 0.02 18.6 0.6 1 23 476 498 476 498 0.96

9 16 0.0018 0.99 13.3 2.3 1 23 504 527 504 527 0.97

10 16 0.00038 0.21 15.5 1.4 1 23 934 957 934 957 0.96

11 16 0.0014 0.78 13.6 0.4 2 23 1180 1201 1179 1201 0.97

12 16 0.16 88 7.2 6.3 1 23 1207 1230 1207 1230 0.97

13 16 0.16 88 7.2 0.9 1 20 1258 1278 1258 1279 0.94

14 16 0.031 17 9.4 1.5 1 23 1346 1369 1346 1369 0.96

15 16 0.021 12 9.9 0.4 3 23 1417 1437 1415 1437 0.93

16 16 0.0095 5.2 11.0 7.8 1 23 1443 1465 1443 1465 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.4e-05	0.024	18.4	0.8	1	23	26	48	26	48	0.99
2	16	1	5.6e+02	4.6	1.9	2	23	61	82	60	82	0.95
3	16	3.4e-05	0.018	18.8	5.6	1	23	88	110	88	110	0.99
4	16	0.7	3.8e+02	5.2	0.3	1	23	188	212	188	212	0.91
5	16	0.0018	0.98	13.3	1.6	2	23	218	240	217	240	0.96
6	16	0.13	69	7.5	0.8	1	20	289	308	289	309	0.94
7	16	0.058	31	8.6	0.1	1	23	445	467	445	467	0.96
8	16	3.7e-05	0.02	18.6	0.6	1	23	476	498	476	498	0.96
9	16	0.0018	0.99	13.3	2.3	1	23	504	527	504	527	0.97
10	16	0.00038	0.21	15.5	1.4	1	23	934	957	934	957	0.96
11	16	0.0014	0.78	13.6	0.4	2	23	1180	1201	1179	1201	0.97
12	16	0.16	88	7.2	6.3	1	23	1207	1230	1207	1230	0.97
13	16	0.16	88	7.2	0.9	1	20	1258	1278	1258	1279	0.94
14	16	0.031	17	9.4	1.5	1	23	1346	1369	1346	1369	0.96
15	16	0.021	12	9.9	0.4	3	23	1417	1437	1415	1437	0.93
16	16	0.0095	5.2	11.0	7.8	1	23	1443	1465	1443	1465	0.98

Sequence Information

Coding Sequence: ATGCAAACTTCAAACTATGTCGATGAAATTGAACATTCGGACAACAGAAGCAGTTGCAGTTCTCCCGACCGCAAGTATGTATGTCCAATATGTGAAATAATGTTAACGTCACAACACGAATTTACTAAGCACATACGATCTCATAACAACGAATCTGAACAAGATTCCGAAAGAGGATGTATCTGTCGCATTTGTTGCAAAGTTCTAAGTTCCAGTGCAAGTTTAGACAGACACGTTTTAATACATAGCGGCGAACGGCCTTTCAAATGTACCCATTGCGGTGATACCTTTACAACTAATGGAAATATGCATCGACATATTCGAACACACTTagtgaaaaatgaaaattatgattcTGACGATTGTTCTGACAGTGGAGCAAGCAGTAGTTGTAAAACGAtagaatataataataataaagtaacaCCAGAAAAGGATCACAGTAAAGGCGCTTATGTCTTTACGGGAACTAAGCGCAAGTTCTACGACGAAGACGAAGTCTTTTATAAAAACGCACGTATTAGATTAGAACAAAATACTGAAGACAGAATCGGTCACAATTACAGCTGTGCCGTGTGTTCAAGAAAAGACTTCTACTCACAAGAATCATTAGAAATGCACTTGGAAGATAATCATCCTGACTATCCCACAAAATGCAACCTCTGTaaccaaatatttaaaaaccaaaagcTCTTAAGTGATCACAAGAGCACCGTTCACACCGCTGACGAGAACTCCAAGGTGCGAACTTCTGTTGTTGGATTCAAAGATTTGACGTTTGTTGACTTTTCAAGTCAAAAGTTTCCTATTATAGCTCGTTACGAATGCGAAAAGAACTTGCATAAGGTGTCGAGCGGATTAAAATTCCAGTGCGAAAAATGTACACGAGCATTTCCTTGTGCAAGCTCTCTTGAAATACATAAATCAGATTGCGCAGTTGGTTTGGATTtatctgttaaaaataaaaactcaagTACGGTAAAAAATACAACTTATCTAGAAAAGGACGTTGTTAGGAATGATTTCTTTGCAAGATTAGACTTACAAAACAAATCAGAGAAGTGTGATAAGCCTCTCACCGCAAAAATGATAAAGCTAGACACACTCAAACCTTCTGAAAACAATAAGGATCTGGCTGATATACAGTCAATAATATCAATGACTACAAATGGGACTTTGTTACAACAACTTCAAACCAAAGGCGTTGATGTAAATTTTCCATTAGGGCAAGCTTTCAACGAAACAGAGCTTGCTATGTCAAAACATGAACACGAAGAAGAATCTCAAGATCTTTTTGCTGCCGAATTTAGAAAAATGAAACTTCGTGGTGAATTTCCATGTAGGCTTTGTAAAGCGGTCTTTCCAAATTTGCGAGCATTAAAGGGACACAACCGTGCTCATTTTAACGGAAACAATAGTGGAACATACTTGTGCAATATGTGTCCCCATTCTACAGTTGATAAAGCAGCACTTATACGACATATGCGAACGCATAATGGAGATCGCCCTTATGAATGTGCACTTTGTAATTATGCTTTTACAACAAAAGCTAACTGTGAAAGACACTTACGTAACAGGCATGCTAAGGCAACACGTGAAGAAGTAAAAAAATCCATAATATATCATCCTTCTGAGGACCCTAGTAACGATGACATCAATAAGATGTTGTCTCGTGAAGACAACTCCAAAACTGTGTTTTCAATAAACGCATTACAAAACTTTTCTGAAAAGGAACCTGAAGATAATTTAGAGACGTCGGATCTGCCGAAGCTGTTATCTGAAAGATCACAAAAAGATGTTACTTCATCCATGAGCAGAATTAAAAGTGTCGAGGGGTTTAAAGCAATTACGAACATGCCAGACAGATCATATTCTGTAAACAGTAGCATTGATAAAATACATAACGATAAATTGAAACCAACTATAGATTGTAAACTTGATAGTGAAAACTACatgccaaattttaatttttccccaATGATTACTAACACATCAACTCCAATAAAAGTAACTCCCAAAGTGTCTATAAAACCAGTAGATATTTTAAAAGATGTTTCAACATCATATGGGTTTTCCAAGTCTTTTGAAAGCACTAATCAATCTAATGATGTGGCGCTTGATTtaagtacaaaaaaattaagtgaaaaaccTATAGATTCACCAAAACCCAAAATATTTGAAGTAGAAATTGATTCTGAACCCGAAGATCTGTCGAAAAAGCCTAGCGTATCACCAGTGATACCCACAGATATACTAGCTCAACGTCTTCTCAATAACACGCCAAAAATTGATCCAGCTGGTTTGTATGCGTCACAGATGGTAATGTACGGAAACAACATATCTAGGCTGCATGGTTTACCAGCATGGCCCTTTACTTTTAGTCCTTTACTGATGCCTCCAATATCCCCACGGATATTGCAACAAGATCCAAATGAAGTGAAGGAGAGGTTACAAAGACTGCAACTGTGTGGCGGTGGAATGGTTATTGACAACTTTGCCGAAAGGTTAAAAAGTTTTCACCAACAAGCCCTTTCGAATGCAAACATGGAGTCTTACCATTCGTTTAAAACGAATGACCACCTACAAGAACCATTAGTTCAACCGCCAAATCCTATACTAAAATCAGAAGACATTAAGCCATTGACGTTAAATATCGATCATGGTTTATCAGAAAATTTAGCTAAAATGCCAATTCAAAAAGCTGACCCCATGTCTTCACCAAATTCAGTTAAGATGGTTATAAAAAATGGAGTTCTTATGCCAAAGCAAAAACAAAGACGTTATCGTACCGAACGACCGTTTTCGTGCGAGTATTGTTCAGCTAGGTTTACTCTAAGATCTAATATGGAACGCCACATCAAACAGCAACACCCGCAGTTTTGGAAACAAAGACAAAGAGCGGGTATTGGAACTCCAGGGCGAAAAATGTCTACAAACTTAACACCAATAAGTAGCGGGTGTGACATATCAATTCCAAATTATGAAATGTCCACCAAACATGAGTATAGCGATGGAAATGATAACGAAATTTCTGAAAAAATTAAGTATGCAATTTTAGCTCACCATTTGAAAGCAGCTCAAAATTATCAtgcaaaaacgtctattgatatTAAGGAGGAGGATGAAGAAGATGACTACGAATTAGTTATTGACGAAGTTGAGGGTTCTCACAAAATAGGTGAAAGTTCAACTACGTCCACTACTATTAAGTGTGAAGATAGTTACCAACCAGACCATAGTACAAAACAATATATGGAAGCAGCTAGttcagaatctttaaaaaatgaTGAAGCTCAAGATTTGGTTTCCGTTTCGCGCTTATTAGACAATGCTTCACGACAACCTTTTAGAGAGTATTTTCAAAGAGATGGAGATGTACGCGAAGATGCTGTTAGTGAAGAAGATGAAGAGGGACTCGTAGCTAGTGGTAGTACAAGTGATGGAACAGGAACCGATGAAAATCGATCGGAGTCTGAAAATATCACGCTAGTACCGATAAAGAAAAAATCTGCTTATTCACTTGCTCCAAATCGTGTCAGTTGTCCTTACTGCCAGCGTAAATTTCCATGGACATCGTCACTCAGACGACATGTTTTAACTCACACAGGTCAGAAACCATTTAAGTGCAGTCACTGTCCTCTGCTGTTTACCACAAAATCCAACTGCGATCGACATTTGTTACGAAAACATGGAAATTCTGCAACGGCTGTAAATAATGACGTTCTCAGTAATTCAAATAGTTACATGATGCGAAATGTTCCAGAACGACCTTTTAAGTGCTCTAGTTGTCCAAGTAGTACGTTCTCAACATATTCAAATCTTAGTAAGCACATAAGTTGTAAGCATTCTTTACAGGGCTTGCACAGCGATGATGCTAGATCTCAGGTTTCAACTGGTTATGAAGCCGGTAGCTCGGAAGATGAGAAAATACCTCATTTAGACTCTAAAACAGACTgggataaacaaataaatatacacAAGGGATCTCTATCTGGGTCTGAAGGATTATGCCATTTACAAAATTCTGATTTGCCATTTAAGTGTCATTTGTGCGATAGTTCGTTTAGTGAACGACAAGATGCTTTGGATCATATCCGAGATAAACATCGGTTAGAATACGAATTGCTCCTATCAAAAAATGCCTTAGACGCCGGCGCATTGACTCCCGACGAACAGCTGCATCATGATGATAATGAAGACAGCGAAGTAAGAGGAAAGTTTCCAGATTACGCAAACAGAAAAGTTATTTGCGCTTTTTGTATGCGTCGTTTTTGGTCAGCTGAAGATTTAAGGCGACACATGCGAACACATACAGGCGAAAGGCCGTTTAGTTGTGATATTTGTCACCGCCGTTTTACTCTCAAACATAGCATGCTAAGACACAGAAAGAAACACAATATCACATTCGAAAATGACAACGTAAACAGTGATGAAGATGTCAATAACGCAAACTTATCTCAaacgtttgaaaaattaataaaagcaacGCATGGGAACgtttcaaataaaacaaatattgacAAAACTGACGAATCTGATGGTACTGAAGGAAATGATTTAATAGGCAATTTATTAGGTATAAGAGATCGTTCTATTATCGACAAGGTACTAGCAGCTTCAGCTGACGATGCTGCCAAACTTCTTGGAGTAAGAGGTGGTGAGAAAGAATAG
Protein Sequence: MQTSNYVDEIEHSDNRSSCSSPDRKYVCPICEIMLTSQHEFTKHIRSHNNESEQDSERGCICRICCKVLSSSASLDRHVLIHSGERPFKCTHCGDTFTTNGNMHRHIRTHLVKNENYDSDDCSDSGASSSCKTIEYNNNKVTPEKDHSKGAYVFTGTKRKFYDEDEVFYKNARIRLEQNTEDRIGHNYSCAVCSRKDFYSQESLEMHLEDNHPDYPTKCNLCNQIFKNQKLLSDHKSTVHTADENSKVRTSVVGFKDLTFVDFSSQKFPIIARYECEKNLHKVSSGLKFQCEKCTRAFPCASSLEIHKSDCAVGLDLSVKNKNSSTVKNTTYLEKDVVRNDFFARLDLQNKSEKCDKPLTAKMIKLDTLKPSENNKDLADIQSIISMTTNGTLLQQLQTKGVDVNFPLGQAFNETELAMSKHEHEEESQDLFAAEFRKMKLRGEFPCRLCKAVFPNLRALKGHNRAHFNGNNSGTYLCNMCPHSTVDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKATREEVKKSIIYHPSEDPSNDDINKMLSREDNSKTVFSINALQNFSEKEPEDNLETSDLPKLLSERSQKDVTSSMSRIKSVEGFKAITNMPDRSYSVNSSIDKIHNDKLKPTIDCKLDSENYMPNFNFSPMITNTSTPIKVTPKVSIKPVDILKDVSTSYGFSKSFESTNQSNDVALDLSTKKLSEKPIDSPKPKIFEVEIDSEPEDLSKKPSVSPVIPTDILAQRLLNNTPKIDPAGLYASQMVMYGNNISRLHGLPAWPFTFSPLLMPPISPRILQQDPNEVKERLQRLQLCGGGMVIDNFAERLKSFHQQALSNANMESYHSFKTNDHLQEPLVQPPNPILKSEDIKPLTLNIDHGLSENLAKMPIQKADPMSSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQFWKQRQRAGIGTPGRKMSTNLTPISSGCDISIPNYEMSTKHEYSDGNDNEISEKIKYAILAHHLKAAQNYHAKTSIDIKEEDEEDDYELVIDEVEGSHKIGESSTTSTTIKCEDSYQPDHSTKQYMEAASSESLKNDEAQDLVSVSRLLDNASRQPFREYFQRDGDVREDAVSEEDEEGLVASGSTSDGTGTDENRSESENITLVPIKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATAVNNDVLSNSNSYMMRNVPERPFKCSSCPSSTFSTYSNLSKHISCKHSLQGLHSDDARSQVSTGYEAGSSEDEKIPHLDSKTDWDKQINIHKGSLSGSEGLCHLQNSDLPFKCHLCDSSFSERQDALDHIRDKHRLEYELLLSKNALDAGALTPDEQLHHDDNEDSEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNITFENDNVNSDEDVNNANLSQTFEKLIKATHGNVSNKTNIDKTDESDGTEGNDLIGNLLGIRDRSIIDKVLAASADDAAKLLGVRGGEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -