Basic Information

Insect: Platerodrilus igneus
Gene Symbol: -
Assembly: GCA_036346225.1
Location: JARFIW010001435.1:168525-194698[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.037 20 9.2 0.7 2 23 367 388 366 388 0.89

2 11 0.0008 0.43 14.4 0.2 2 23 391 412 390 412 0.97

3 11 6.2e-06 0.0034 21.1 0.7 1 23 485 507 485 507 0.99

4 11 0.00018 0.098 16.5 1.1 1 23 510 532 510 532 0.97

5 11 0.0018 0.97 13.3 2.2 2 23 539 560 538 560 0.97

6 11 1.7e-05 0.0094 19.7 1.7 1 23 566 588 566 588 0.98

7 11 0.024 13 9.8 1.6 1 23 594 616 594 616 0.94

8 11 2.5e-06 0.0014 22.3 3.2 1 23 624 646 624 646 0.98

9 11 0.02 11 10.1 0.1 1 23 652 674 652 674 0.96

10 11 2.3e-05 0.012 19.3 2.0 2 23 681 702 680 702 0.97

11 11 0.00015 0.08 16.7 1.6 1 23 708 730 708 730 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.037	20	9.2	0.7	2	23	367	388	366	388	0.89
2	11	0.0008	0.43	14.4	0.2	2	23	391	412	390	412	0.97
3	11	6.2e-06	0.0034	21.1	0.7	1	23	485	507	485	507	0.99
4	11	0.00018	0.098	16.5	1.1	1	23	510	532	510	532	0.97
5	11	0.0018	0.97	13.3	2.2	2	23	539	560	538	560	0.97
6	11	1.7e-05	0.0094	19.7	1.7	1	23	566	588	566	588	0.98
7	11	0.024	13	9.8	1.6	1	23	594	616	594	616	0.94
8	11	2.5e-06	0.0014	22.3	3.2	1	23	624	646	624	646	0.98
9	11	0.02	11	10.1	0.1	1	23	652	674	652	674	0.96
10	11	2.3e-05	0.012	19.3	2.0	2	23	681	702	680	702	0.97
11	11	0.00015	0.08	16.7	1.6	1	23	708	730	708	730	0.98

Sequence Information

Coding Sequence: ATGAATAGAACACTAGGTCAAATTTTACATGAAGAATATGCTTTTGTAAATCATGATGATATCTTAGTCATTTCAAatacctttgaagaacatatcatAACCTTAAATGAAGTAGCAGATTGCTTAGGCAAGGctggttttaaaattaattgggaAAAATTTAACTTTGCTGTTTCTTCTCCTTTTTTTTTAGGGTTTATTGTCGATGAAAATGGCTTGCTTGCTGACCCCATTAAAgtgCATGAGTCAGATGATCTACCAAAGGTGATATGTGAAGCTTGCCTATATAAATTAGAATTATTCTTCGACTTCCGTGAACGTTCACTACGTACTGAAAAAGTATTGATATCAATTTTAAAAGATATAGCTACAAAATTAACTGCTGGTCAAGAAATTACTAAAATACTTTCAAGTTCGGACATTTCTGCTATTGAACAATCATCAGGTGCCATTTCAATTCCTACTCCACATCCACTTTTAACTAATACTATACTTAACAGAAATGTAATTGATGTATCACATTTACAGCGTGATATTATTGGTCATCAGGAAATTATATTACAACAAACTTCGACTTTGAATGATCATTCGTTATCAAATATTCATTTAGCTAATTCACATTTTAGCAGTTCGGATTTGTCGAATAAAACAGTATTAATAAATGACATGAACAGCATTCGCTATACTATTGATAATATGGAACTTATTCAACGACATCAGTTATTAGCAGAACAATATAGACTGcatcaaaattttaacttaaatattaTTAATGATGATTCCGCATGCACAGATGAAAGTTCTGTTTCATCAAACACTCACATCGATGATGAAAATCACACATCAGATgttattataaaagagGACGATATTAAACTAGAACAAACGTTTGTGGATAATCAGTGTCAAACCGAATCACTTAAAAGCCAATCTACAGAAGAATTCGAAGACTGTACTAGTAACGAACATCAAATGATAATACAGGATCAAATGGAGTGTGATGATAAATTGACTCTTAAATCTGTAAACTTGTCTGAAAAGAGTAGTACAACTTTATACATAAATCAAAAGCACAGCAATAACAATGAATTGAGAATTCAGTGTAATATCTGTAAAACTAATTTTAGTGATAGAGGTGAATTTGAATTCCATTATGAACAGCATTTTAGTAAGTGTGATAAATGTTTGACAGTATTTCCTTCGAAAGAAGCGTTAAATATACATTTGAAAGCACATGATGGAGACATTGACTGCAAGACTACGAAAAGAAGATCTAAAAGATTTGTGCCAATATTGAGAAAAAGGGTACACCCTGTTTTAGTTAGTAATAGTGAAAGTGACGATGGTGGTGCAGGTAATATCGAGACTACAGTTGATGATGAGAGAGATGCAGAAGATCTCGAAACAGATGCAACAGGGTCTTTACCCTTAAAGATGATAAACCAGATACCCTACGAATGTTTAGAGtgtggaaaaatatataaaacaaattataaattagTGGAACACCTGCGAAAACATAAACCCTTCAAATGTAATTCATGTgacaaagaatttaaatctaaGATTGGATTGGCACAGCACAAAGCGAAACATACTGGACGATATGATTTATCATGCTCTACTTGTGGAAAAGGTTTTCAATGTAAAAGTTATTTAATGGTACACCAAAGGGTACATTCAGATATAAGGCCTTACCCATGTACTACATGTGGGCGCAATTTCAAAACCAAACAATCGCTTTTGGATCATACAAATAGACATTTTGGAGTCAAACCATATATTTGTGACATATGCGGTAGAGGTTTTCATACAAAAGGCTTGTGCAAAGGACATCAAATAGTTCACActggtttagataatagaaaatattCGTGTAAAATATGCAATAAAATGTTTGTGTCTAAGAGTTACTTGCATACCCATGTAAGAATACATACAGGCGAGAGACCTTTTATATGTGCAgtatgtGAGAAAGGTTTTTTAACAAAAGAAGAATTGAGAATTCACTCCCTAATGCATACAGGAGAAAAATCACTTGTATGTGAAATGTGTGGTAAAACATTTGCACGTAAAGATTCTTTACGGTGCCATCTTAGGTCACATACTGGAGAACGACCATATAGCTGTGATCATTGTGGACAAACATTCACCCAATTTTCACCTATGGCAATACATAGAAGACTTCATACTGGTGAAAGACCATACAATTTGCCTCACAGTCCACAGCTTCCAATTCCGGTATCACCAAAAACATGTGAATTAGACGACGATGTTGTTGAAGGTTGTACAGATTTATCGGATGATGAAGAAAGGAGGGATccagactttttagaaaatacaaatactgaactGCACATAATAAATCAGTCTGAAGTAAAGGATCTCGTTCGTGATCTACATTTATCCAAGAATCTAGCTGAAATACTAGCATGA
Protein Sequence: MNRTLGQILHEEYAFVNHDDILVISNTFEEHIITLNEVADCLGKAGFKINWEKFNFAVSSPFFLGFIVDENGLLADPIKVHESDDLPKVICEACLYKLELFFDFRERSLRTEKVLISILKDIATKLTAGQEITKILSSSDISAIEQSSGAISIPTPHPLLTNTILNRNVIDVSHLQRDIIGHQEIILQQTSTLNDHSLSNIHLANSHFSSSDLSNKTVLINDMNSIRYTIDNMELIQRHQLLAEQYRLHQNFNLNIINDDSACTDESSVSSNTHIDDENHTSDVIIKEDDIKLEQTFVDNQCQTESLKSQSTEEFEDCTSNEHQMIIQDQMECDDKLTLKSVNLSEKSSTTLYINQKHSNNNELRIQCNICKTNFSDRGEFEFHYEQHFSKCDKCLTVFPSKEALNIHLKAHDGDIDCKTTKRRSKRFVPILRKRVHPVLVSNSESDDGGAGNIETTVDDERDAEDLETDATGSLPLKMINQIPYECLECGKIYKTNYKLVEHLRKHKPFKCNSCDKEFKSKIGLAQHKAKHTGRYDLSCSTCGKGFQCKSYLMVHQRVHSDIRPYPCTTCGRNFKTKQSLLDHTNRHFGVKPYICDICGRGFHTKGLCKGHQIVHTGLDNRKYSCKICNKMFVSKSYLHTHVRIHTGERPFICAVCEKGFLTKEELRIHSLMHTGEKSLVCEMCGKTFARKDSLRCHLRSHTGERPYSCDHCGQTFTQFSPMAIHRRLHTGERPYNLPHSPQLPIPVSPKTCELDDDVVEGCTDLSDDEERRDPDFLENTNTELHIINQSEVKDLVRDLHLSKNLAEILA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -