Basic Information

Gene Symbol
-
Assembly
GCA_036346225.1
Location
JARFIW010000319.1:8032094-8034151[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.6e-07 0.0013 22.2 0.1 2 44 10 54 9 56 0.89
2 4 6.2e-07 0.005 20.3 0.0 1 46 62 111 62 111 0.97
3 4 4e-11 3.2e-07 33.7 0.0 1 42 118 159 118 160 0.98
4 4 2.6e-09 2.1e-05 27.9 0.0 2 45 171 214 171 215 0.93

Sequence Information

Coding Sequence
ATGGTTCTTCATCCTAATCTTAATAAATCCCAATGGACTTCAGTGGAAGAGGAAAAGTTACAAGAACttgcaaaaaaatataattttcaagaTTGGGATGCAGTTATTTCTGAATTGGGTACCAATCGTTCACCATTTGCAGCAGCTAAACATTATCTTACAAATTTTTCTACAAAGTACAATCGAGATCGTTTCACACCAGAAGAAGATGGATATCTTATGGAAGTTGTTAAAAGTGTTGAAATAGGTTCTTATATTCCTTGGGGAAAGGTGgcatattattttgaaaatcgCTCAAGGTATCAACTTTATCACAGATACAAATATTACTTGGcttataaaaataccaaaaaagGTCTGTTTACTGTAGAAGAAGATGCtctgttaatatttttagtaaataaatttggaaaggtttttaataaaattgctgaATATTTTCCAAACCGTGCTCCTATACAGTTACGAAATCGATATGGTTGTTATTGGAATAGCAGTGATTTACAATATGGATCTTATTCCTATGAGGATGATTTAACGATTTTAAATTATGTTGAGGAACATGGAGAAAAAAGTTGGGGCAAACTCGCATTAACTTTACAACGTACACGAGCCCATGTAAGGCAACGGTAtacaacattaagaaaatggttGTTAAGCAATCCAGAGTTACATCTACTAGATATACCTAAACGAAGTAGAACTCTTATTCAACAAAATCATAGCTTTAGAAATAAGCGTGTTGCAGAAATTTTGGCAGATATAAATGATTCTGATGACATACCTAAATTAGAAGACCTTGAACAATTAACACATTTAAAAATGAGAAAAGATAATGCTTCTAAAAAGTTTCACAATGACCTAGATTTTGATTCAGTTGATATGGAGCTAAGAGATGCTGTAGTTTGGCCTTATGCTTCAAAAAGGTATATGGATAGAGAAAAACGTATCAAATCTACAGAACGAATTACTAAATTGTTGAAAATGTTTAATCAAGATATTGATGGTTTAATACATCCTGATGAGGATTACAAAGTTTTTAATGTACGCATCGAATTATTCATGTCATATCTTAAGAATACTTTAGAACCTGAAGCTGCCATTTCTATAAAAAAAGAAGAAGCTGATAAATTGATTATTGCACCAAATTTAGCCACGATAATAAGTTTTAGTTACATTAGGGCACATTTAGGTGTAGTTGGAAACGAAAATAGAGTATCagaagatttaaaaattaatatacgtTTGAAATTAGAACATTCTGTACTAAACTATAATGATGTTGTACCTTTAGAATATGATAAAGAACAACTGTTTATGCAAAGAGCATATTATACATTTAAATGGTCTAATATATTATCAGAAATGTATACGTGTTTAAACCTAAAAGCGTGTGAAACCACTAACAGTACACCCAGTGCAAATCCAGTTATTAAGGAAGAAGAAAATGAAGAAAGTTCTTTATATCATCTAACAGATAAAAATATGCCACCAGTAAAAAAGTCCCAAACATCTCaattaacattaaaaattaacataGCAGATGTTAAGAAACCTGCAAATAAACGTACACATGGTCAAACCAAGATGTTTCATGCGAAGGTGATACGTATGAGTAAGCCATCATTAACCAAAGAAGTTGTAAATAATACTTTGTCACCTACTAAAGTGATCAAAACAGATGATTGCTTTAGTGCTCACACTGATATAAAGAAAATTAGTGATTCTAAAGTAATAAATGTTTTTGACCCTAATTATAGAATATGGACTTTCCCTAAGACTGATCCTAAAAATTTTGATACGATATTCGCCAAGAACAAGGATTTCGACATGATAGTTTTTCGTTCTTGCATGCAACCAAGTACTAGTGGTTCTACTTTTGAAAATTTCAATGCAGTGACAAATGTTATAGCTGATAATGTTAATGTCAATTCCGAACTAGTCAAAAGTTCTAATGAATTTCAAATACATGTAGTCCCAACATTTTCGCCAAacataaaagaagaaaaagatgATAGTAGTTCTTTCTATGATGATAATGgaaatttaaatttctaa
Protein Sequence
MVLHPNLNKSQWTSVEEEKLQELAKKYNFQDWDAVISELGTNRSPFAAAKHYLTNFSTKYNRDRFTPEEDGYLMEVVKSVEIGSYIPWGKVAYYFENRSRYQLYHRYKYYLAYKNTKKGLFTVEEDALLIFLVNKFGKVFNKIAEYFPNRAPIQLRNRYGCYWNSSDLQYGSYSYEDDLTILNYVEEHGEKSWGKLALTLQRTRAHVRQRYTTLRKWLLSNPELHLLDIPKRSRTLIQQNHSFRNKRVAEILADINDSDDIPKLEDLEQLTHLKMRKDNASKKFHNDLDFDSVDMELRDAVVWPYASKRYMDREKRIKSTERITKLLKMFNQDIDGLIHPDEDYKVFNVRIELFMSYLKNTLEPEAAISIKKEEADKLIIAPNLATIISFSYIRAHLGVVGNENRVSEDLKINIRLKLEHSVLNYNDVVPLEYDKEQLFMQRAYYTFKWSNILSEMYTCLNLKACETTNSTPSANPVIKEEENEESSLYHLTDKNMPPVKKSQTSQLTLKINIADVKKPANKRTHGQTKMFHAKVIRMSKPSLTKEVVNNTLSPTKVIKTDDCFSAHTDIKKISDSKVINVFDPNYRIWTFPKTDPKNFDTIFAKNKDFDMIVFRSCMQPSTSGSTFENFNAVTNVIADNVNVNSELVKSSNEFQIHVVPTFSPNIKEEKDDSSSFYDDNGNLNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01210509;
90% Identity
-
80% Identity
-