Pign005554.1
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- clz9
- Assembly
- GCA_036346225.1
- Location
- JARFIW010000053.1:7477734-7479997[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-08 1.7e-05 27.8 0.0 3 39 17 53 15 59 0.88
Sequence Information
- Coding Sequence
- aTGGTTCGGGACTACAAACATAAAACCACTCGGGCCGCTTACTCGGCTGAGGACTTGAAAACTGCGGTGGAACATGTTACAAGCGGAAAATGTGGCACACTACGTGCTAGTAAAATCTTCAGGATACCTAGAAGCACTCTAAAGGATCACATTAAAAGTCGTAGAGGTATAAAAAGCTCGACGATGGGAAGACCTACAGCCTTAGCAATCAAAGATGAAGAAGCTCTTGCAAATGGACTCAAAAGTCTCGAAAAATGGGGTTTTGGACTCAGCCGCAAAGAAGTCCTAGAAGTTGTGGGCAAATATGTTACACACAAGCAGCTCAAGACTCCATTCAAAAACAACGTACCTGGTGAggattggtttttaaaatttaaaaaaagacataatttgtcaattaaaaaaccTGAAGCGTTGGAATACGCCAGAAAGAAAAATACGGATCCCTTTCTAATATATCCATATTCTGAgttgttaaaaaatacaattcaAGAACTGAACCTTCAAGATAAACCACCTAATATTTGGAATATGGACGAGGCAAGTTTTTGTAGTGATCCTTCAAAGACAAAAGTCATAAGTGAAAAAGGCCATGCTTGTACTAGAATCATTTCTGGTCCGGGAAGAACGAACACCAGTATCCTGCTAGCTGCTGCCGCAGATGGACAAAAGGCGCCACCGTTAATTATATATAAAGGAAAAAATGTCTGGGACACCTGGATAGCAGATACAAATAAAGAATACCCAGGTACGACATATGCTGCCACACCGAACGGGTGGATGGAgtcagaagtttttaaaaactatttcgtgAAAACTTTCATACCCTTGGTAGAAGGAAATGGTCCTACATTAGTTGTATATGACGGTCATACAACTCATATCGATATTGATGTGGTACAAGCCGCAGTGGAAGCGAACATAACCATTCTAAAGTTACCGCCACATAGCAGTCATCTTCTGCAACCACTTGACTTGGCGGTTTTCAAATCTATTAAGGTGGCATGGGATACATTACTCGTGAAATGGCAACGGAATCATGTGGGTCAGAAATTACCGAAAAGCAAGTTGGCTGAAATGGTGGGACATATTTGGAAAGATGCCGATCCAAAAATTATGTGTGAAGGATTTAAGAAAGGTGGCATCTACCCCTACAATTGTGATGTTATCCCACATGAAAAACATGACCCACAACAAATGAATCGGTGGAAAGCTCAACAGGCGATGAATACTGGCATGTCTACAACAAATGAACTTACACCCCCAATAATACAAAACGGACTCGATGAAAACGTAGAATTTCTAGAACGAGGTCCACCAGAACATGCCGCAATTGATTCAGAAGATTTCTCAGTTACAGAAGAAGTTCTAGGACTGACTGAAAAGGAAACCGCTGTGGAAGAAAATATTCAACTTCAAACAAATGATGTAACAAACAAAGTCGAAAATAATCCCAACACCCCAGTAGATTTAACAAGCGCAATAGAAAACCAAAACCCGCATACCTTTGAAGAACTTTTACTGAACCTGGTAAAAGGCAATCAAACTAATAATGCACCGAAAAGATTCAGGAAGAAAGTATACCCCGGGGCCGAACTAATAAAAAGCGAAGTCAAAAAGAAACAGATGACTACCAAAGAGccaaaaactaacaaagaaaagAAACCAGTCAAAGATAATCAAACTAGTCGTGCAAAACGTAAAAAAGTAAATGTGCAACATGATTCAGAAACGGCTGAAGATCAAGATTTACATTTAGATGACGAAGAAAGCGATTTTGAAACACTTTCTGAAATCGGTGCAGAAGCAATAGCTGAGACGTTCGAGTTTGAAAAAGATGAAGTTAATGACAAACAAGTTGGAGATTGGTTATTGGTCAAACTCAATTCTGAAAGAAAGACTTCACAATATTTTATAGGAACAATTGAAAGCATCGATTTGGAAACAGGAAATccaattgtaaaatttttgcgACGAATTATATCGAAATCAGCGCCTTCCAAACCAACCTTCACATGGCCTGATGTGGAGGACATTTCAGAAATTACCACAATTGATGTTATTCGTGTGTTACCTTCGCCTAGCGTGGGAAGAAGAGGTGAAATCAACTTTCCCGTCAGTTTTTCTGGTTATCCTAacataaattag
- Protein Sequence
- MVRDYKHKTTRAAYSAEDLKTAVEHVTSGKCGTLRASKIFRIPRSTLKDHIKSRRGIKSSTMGRPTALAIKDEEALANGLKSLEKWGFGLSRKEVLEVVGKYVTHKQLKTPFKNNVPGEDWFLKFKKRHNLSIKKPEALEYARKKNTDPFLIYPYSELLKNTIQELNLQDKPPNIWNMDEASFCSDPSKTKVISEKGHACTRIISGPGRTNTSILLAAAADGQKAPPLIIYKGKNVWDTWIADTNKEYPGTTYAATPNGWMESEVFKNYFVKTFIPLVEGNGPTLVVYDGHTTHIDIDVVQAAVEANITILKLPPHSSHLLQPLDLAVFKSIKVAWDTLLVKWQRNHVGQKLPKSKLAEMVGHIWKDADPKIMCEGFKKGGIYPYNCDVIPHEKHDPQQMNRWKAQQAMNTGMSTTNELTPPIIQNGLDENVEFLERGPPEHAAIDSEDFSVTEEVLGLTEKETAVEENIQLQTNDVTNKVENNPNTPVDLTSAIENQNPHTFEELLLNLVKGNQTNNAPKRFRKKVYPGAELIKSEVKKKQMTTKEPKTNKEKKPVKDNQTSRAKRKKVNVQHDSETAEDQDLHLDDEESDFETLSEIGAEAIAETFEFEKDEVNDKQVGDWLLVKLNSERKTSQYFIGTIESIDLETGNPIVKFLRRIISKSAPSKPTFTWPDVEDISEITTIDVIRVLPSPSVGRRGEINFPVSFSGYPNIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01294986; iTF_00423755; iTF_00464673; iTF_00423792; iTF_01294992; iTF_01294993; iTF_01210462; iTF_01210400; iTF_00423756;
- 90% Identity
- iTF_01294992;
- 80% Identity
- -