Pign090365.1
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- -
- Assembly
- GCA_036346225.1
- Location
- JARFIW010001026.1:1310971-1311402[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 7e-07 32.2 0.0 2 40 15 54 14 59 0.90
Sequence Information
- Coding Sequence
- ATGGGAAAGTATACAAGAACAACGCAAAGGCAGTCTTGGGATGAGAACAGTATGCGTCAGGCTGTTGAGGAGGTACTGGAGAGAAGAATGGGGTATCTCAAAGCTTCTAAAGAATATGGGGTTCCTCGTACAACCATTGAAGCAAAAGTGAAGAAAATTAAACAGGGTGTTCTTAACAGAGAGGATTCAGCAAAAAAAGGACTAGGACGTCATAAACCTGTTTTTAGTCCTGCTCAGGAAGAGGAATTGGtggaatatattttgtgtatgGAATCACGCCTGTTTGGTTTAACTCTCAATGCATTAAGGTGTTTGGCATTTGAATTAGCAGAACGCAACGGCTTGCCTAATAGATTTAATAAGAGCAAGAAAAAGGCTGGTAAAGCATGGCTGTATGCTTTTCTCAATCGGCATCCGACTATTAAACTTTGA
- Protein Sequence
- MGKYTRTTQRQSWDENSMRQAVEEVLERRMGYLKASKEYGVPRTTIEAKVKKIKQGVLNREDSAKKGLGRHKPVFSPAQEEELVEYILCMESRLFGLTLNALRCLAFELAERNGLPNRFNKSKKKAGKAWLYAFLNRHPTIKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00002017; iTF_01210182; iTF_01515560; iTF_01516158; iTF_01537783; iTF_01210387; iTF_01210298; iTF_00002171; iTF_00002025; iTF_00002172;
- 90% Identity
- iTF_01210298;
- 80% Identity
- -