Pign073914.1
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- -
- Assembly
- GCA_036346225.1
- Location
- JARFIW010000867.1:3787365-3788159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-08 1e-05 28.5 0.0 1 40 18 58 18 60 0.95 2 2 5.2 2.1e+03 1.9 0.0 24 37 84 98 82 102 0.84
Sequence Information
- Coding Sequence
- ATGCCGCGGAATTATAAGCGTAAAATTGGTTCTCGAAGTTACAAAAACTACACTGATGAAAAACTTGAACAAGCTCTTAAAGAAATTAGAAGGGAAAACATCACCTTGCGTGGAGCAGCAGAAAAGTATGGGATTCATAGGAACACCCTTtggttaaaacaaaaacaaaaacacaaaaatgaaTATGGAAAACCAAAAGTTTTTAGTATAGAAGAAAAAAATGCATTTGCTGCCCATTTAATAGCTGTTTCTACATATGGCTTTCCATTCTCGACATTTGATCTAAGATGTgtgtttaaaagttatttagaaaaacaCGGTAGAAAAGTGAAATGCTTCAAACAAAACTTACCTGGCTCTGATTATgacaaattatttctaaacagACACAAAAACCTTACCCAGCGAATCGCTCAAAATATAACTTATGCGAAAGCGGCGACTGATGAAGAAATCATTAATGCTTTTTTTGACCATTTACATAACGAATTAAACGGTATTCCTTCTTCCAATATCTGGAATTTTGACGAAACAAGTTTAGTTGATAATCCAGGGCTAAAGAAAATAATTACTAAACGAGGTACAAAATATCCAGAAAGAATTAGAAATACCTCAAAAGCATGCACCTCAATAATGGTTTGTGGCAATGCTGATGGTACATTAGCACCACTTTATGTAAATTACAAATCCCATAAATTATGGAATATATGGACAGAAAATGGCCCTCCTAATACAAGGTATAGTCGAACTAGTTCTGGATGGTTTACTATCAAACTTTTGAAGACTGGTTTTTAA
- Protein Sequence
- MPRNYKRKIGSRSYKNYTDEKLEQALKEIRRENITLRGAAEKYGIHRNTLWLKQKQKHKNEYGKPKVFSIEEKNAFAAHLIAVSTYGFPFSTFDLRCVFKSYLEKHGRKVKCFKQNLPGSDYDKLFLNRHKNLTQRIAQNITYAKAATDEEIINAFFDHLHNELNGIPSSNIWNFDETSLVDNPGLKKIITKRGTKYPERIRNTSKACTSIMVCGNADGTLAPLYVNYKSHKLWNIWTENGPPNTRYSRTSSGWFTIKLLKTGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01210277;
- 90% Identity
- -
- 80% Identity
- -