Basic Information

Gene Symbol
gata5-b
Assembly
GCA_963890685.1
Location
OY982950.1:352930-356015[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-16 8.2e-13 49.4 3.3 1 35 517 550 517 551 0.97
2 2 1.1e-17 5.9e-14 53.0 7.5 1 35 578 611 578 612 0.97

Sequence Information

Coding Sequence
ATGGAGGGCGTCCAACAGATGGTGCGGCCCGGGGAGGTGGAGTCACGCGAAGAAGACGTCTCGGTCGAGGCGCTGCAACTCGTCAAGAGCGAGGAGAGACTCGAGCAAGAGCATCACGAGCAGCACGAGCAACGTGACCAACACGAGCAACACGAACAGCATCGTCACCACGAACAACATCAACAACATGTACAGCATCAGCAGCACGTGCAGCATCAGCAACACGAACATCATCATCAGCAAGAGCATCATCACCAGCAGGAGCATCATCACCAGCAAGAGCATCATCAACAGCAAGAGCATCATCATCACCAACAGCACCATCAAGAAAGCGAGCAGCGGCAGGTGGAGATCGGACGCACGCACTCGCCTCATCACTCGCAGTCCGTGATCACGCGACGCGGCGTGCGCACCATCACTGCCGCGGGGCACATTACGGAGGGCTCGCCGGGGCCCGAAGACGGCGTCAAGGACGAGCCGCCCGAGGGCGGGGCCCCGCTCGACGAGCCCGCGCTGCCGCCCTACGCGCCCAAACTGGAGGAGCTGCCTGAGTACGAGGAGCGGCTGCGGCTCGTCGACGCCGAGGCGGCACGCTACCTCGCCTTCAAGCAGGAGCCGTACCGCACCTTGCACTCGCCAGCTCCcgccccgcccccgcccccgccgccCGACAAGCGGCTGGCGGCCCGTcccccccgccccgcgccctaCCCGCGCTCGCTGGCACTGCGCTACGGCGCGCCACACCACGTCATCGTGGCCCAGGACGACGCGCCCGACCACGACGCCCTCTTCCTCCACAAAGACAAGGGCGAGGGGCAGTACGCGCCCGAGCCCGCCGCGCCCGATGCGCGCCACTACGCCTCGCTGCCGGACCAGGCCGCCGCATCCGCCGCGCTCGAGATGATCCAGACCACCTCCCTAGGCAACCAGCAGGCGGTCGGCGTCGCCTACCAGCAGGTGAAGTACGAGACGCGCGCCGAAGGCGAGGGCCGCGCGGGCACGTACGCCAGCCTGCAGCCCGTGACGTCGGTGCACGGCGGGTACAGCATACAGTCGCCGCAGTACGGCGGCGCGGCGTACGCGGCGTACGGCAGCGCCGGCGGGAAGGAGCTGCTGACGCTGTACGGCGCGGGCGGCGAGGCggcgcggggcgggggcggggccGGGGCGCGCGGGGACGAGTCGCCGCCGGGGCAGCTGCTGTACCGCACGGACCCGACGCTGTCCTCGTCGGGGCTGGCCCCGCGGCAGGCGCACGTGGTGTACGGGTCGGTAGTGCAGCCGCAGGTGTACGAGGCGCCGCCCAGCCCCGGCTCGCAGCAGGTCACGCTCTACACGCACGGGAACGCCGTGCAGTACAAGGTGGGAGCGGAACACTACCTGGGGCAGGGCGGCGGTGTCGAGTACGTCCCCGTCTCGGGGTACGAGGGTGGCCTGCTCGTCGAGGGGTACCCCTCGCCTGCACAGCCGTGGACCTCCCACAACCTGCTGCCTATCGACGACGGCTTCGATCCCAGTATGGCGGGCATGGGCGAGGTGAAGGAGTGTGTGAACTGCGCGGCTGCGACGACACCGCTGTGGCGGCGTGATGGAACAGGGCACTACCTGTGCAACGCATGTGGACTTTACACGAGGATCAACGGCGTCAACCGACCTCCGCTAAAAGGACAGAAAGCCAAGCCGCAACAAGCACTGCCGACGAACGGCAACCGTCGCGTGGGAGTGACGTGTGCCAACTGCCGCACGTCCAACACGACGCTGTGGCGGCGCAACAACAACGGGGAGCCAGTCTGCAACGCGTGCGGACTCTACTACAAGCTGCATAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGCGGCGGCGGCCACTCCAGCGGCGGCATCGCCCGCGCCGGCCCCGCCTCGCTCTCCGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCCGCGGTGGAGGGCGGCGGGGGGGCTGCGGGCGGCGGCGGGGGGGCGGCGGGGGGCGGCCTGCTGCTGCTGCCCGGCCCGGCCCGACACCAAGCCGATATGTGA
Protein Sequence
MEGVQQMVRPGEVESREEDVSVEALQLVKSEERLEQEHHEQHEQRDQHEQHEQHRHHEQHQQHVQHQQHVQHQQHEHHHQQEHHHQQEHHHQQEHHQQQEHHHHQQHHQESEQRQVEIGRTHSPHHSQSVITRRGVRTITAAGHITEGSPGPEDGVKDEPPEGGAPLDEPALPPYAPKLEELPEYEERLRLVDAEAARYLAFKQEPYRTLHSPAPAPPPPPPPDKRLAARPPRPAPYPRSLALRYGAPHHVIVAQDDAPDHDALFLHKDKGEGQYAPEPAAPDARHYASLPDQAAASAALEMIQTTSLGNQQAVGVAYQQVKYETRAEGEGRAGTYASLQPVTSVHGGYSIQSPQYGGAAYAAYGSAGGKELLTLYGAGGEAARGGGGAGARGDESPPGQLLYRTDPTLSSSGLAPRQAHVVYGSVVQPQVYEAPPSPGSQQVTLYTHGNAVQYKVGAEHYLGQGGGVEYVPVSGYEGGLLVEGYPSPAQPWTSHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGGHSSGGIARAGPASLSVEAHSHKVLPPLYAAVEGGGGAAGGGGGAAGGGLLLLPGPARHQADM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01208872;
90% Identity
iTF_01208872;
80% Identity
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