Ppul023291.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plagodis pulveraria
Gene Symbol
-
Assembly
GCA_963890685.1
Location
OY982960.1:6609470-6636913[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.67 1.1e+02 5.2 0.0 2 23 107 128 106 128 0.96
2 16 3 5e+02 3.1 2.0 3 23 373 394 371 394 0.94
3 16 0.55 92 5.4 0.1 3 21 404 422 402 423 0.94
4 16 0.34 56 6.1 0.6 2 23 433 454 432 454 0.94
5 16 0.26 43 6.5 3.8 1 22 502 523 502 525 0.90
6 16 0.041 6.8 9.0 0.3 1 23 1434 1457 1434 1457 0.92
7 16 0.63 1e+02 5.2 0.6 1 23 1462 1485 1462 1485 0.96
8 16 0.00048 0.08 15.1 2.3 1 23 1491 1513 1491 1513 0.97
9 16 0.0027 0.45 12.7 0.5 1 23 1520 1542 1520 1542 0.97
10 16 0.00017 0.029 16.4 2.3 1 23 1547 1569 1547 1569 0.96
11 16 0.0027 0.44 12.7 2.8 1 23 1575 1597 1575 1597 0.98
12 16 6.1e-05 0.01 17.9 1.4 1 23 1603 1625 1603 1625 0.94
13 16 8.2e-05 0.014 17.5 2.7 2 23 1632 1653 1632 1653 0.98
14 16 0.009 1.5 11.0 0.4 2 23 1663 1685 1662 1685 0.97
15 16 0.00023 0.038 16.1 0.1 1 23 1690 1712 1690 1712 0.98
16 16 0.0027 0.46 12.7 1.7 1 23 1718 1741 1718 1741 0.97

Sequence Information

Coding Sequence
ATGGCTTCAGGTTCAGAAGACTCAGACGATGAGCCACTGTCCATATTGGCATTGAAAAATAGAAATGATTCGGAACTTGAAATAACACCGGTGTTCAAAAAGGATGAGGCAAAacctaaatgtataaaaatggaCTCTGTATCGATAGCGTTGCAACCGTTATATGAAACAACGCCAGTCTTGGAAAAGCCAAAAGACGTTTGGTTGTATTTAACAGATCTTACTGCAACTGGCCCCTACAGCTGTTTACTCTGCCCAGAGTGGTTCATAAACAGACCCCGAATAGTAATTCATTACGCGGTAGATCACAAAAAAGATTACTGTGGAATCTGCAGATATTTTGTGCCAAACAGAGAAGCTTGGCAGACACACCTTGAAATCCATTTGCCACTAAAATGCTCTCAATGTTCAGTGAGCTGCTTGTCGGAGAAAGATTTACGAGATCACTTTAGCAGTGTTCATAACCTAGTTCATTGTAGACTATGCCATTTGCGCTTACCAGATGACCATCAGTATCGTAATCATCTTCAAAAACACTTTGTTAAAAATGTTGCATGTATTAATGAGGACACACTGTGGGATTTTCAATGCAAGGATaatcaaaaatttaaatgtcttcTCTGctctaaatttgtaaatattggcAAACAGTTTGGTGATCATTTTATGTCATATCATCATTTGACTTTAAGATGTTTTATGCATTTTATTTCTGGTTATGATTTCCCATTCAACATTAAGGGTGTGGATTTGACTCCAGGATTTATTGCAACACAACTGAATGCTTACAGTAGCTTTGGCTATGTTGACTTCCAAAAGACTATCAAAGTAAAAGAAGAATTAATCCAGGATGAGGTTTATGTAACTACCAACCAATATACAGAAGTGAAGCCTATGCCCAGACTAAATTTTGTTGAGGATTTAAGATACAGCTATGACTCAAAGTTTTATAAAGGTGATGAAGACTTTGATGTCACACATATGGAGTTAATTATATTGCATCAATGCTATTATGATTATGTCCAAGAGGTACTTCATGAAATAAACTCAAATATAATGCCAACCAtctcaaatataaattatgctAATCAGGCTGATGAACCTGATAATATAAACTGCTGTCTTTGTGAATATGAATGTGAAGGAAATAGAACACTTGAAGTGCATATGACTAAAGTGCATGGTGTTAAAAATCTGCCAATATATTGGTGTCGAGTATGTGCTGCTGTTTTTAACAGTGTGTCTCAGTTAGAAGTCCACATATGTCAAGAATTTGGGGAGTTTGTAGATCTTTGGATATGCCAGTTTTGTGATAGTGAATTTATTAACCGAGAAGAGACACGAAAGCACTTGACAAACCACTGGAATGAAATTGAAGATGATAACTGTTTTAGTCCACATTTAGGATTTAAATGCAAGTTTTGTCCGACTCTGTTTTGGAATGAGATTGAACGAGAGGTGCATCATGTGAAAGATCATTACAAAATTCATACAAGTGATTTTTATAAATGCTTGCACTGTGATGAAATATTTGGTGATAAGGTATTTTTCACTCACCACTTCATAGACAAACATGGTAGCGAGAAGCCTCTCTACCTCCTGAAATGTTCTATTTGTTGTCTGGTGCTGCCCACTGTGAATGAAATGAGAGTCCATTTTGAGGAGGAGCATCCAAAAGCGAGGAAATTATACTGTTCATTGGATCCATGCAAGTTCAAACCATTATGTCATAGGAAGTCTTTCTTACTTCATTTGAAgGAGGGCGCTAAATGCAATAAATGTGAAGGAAGGTATCACAGGGCCTGCGTTAATATACCAGACAAAGTGACATTGTCTTCTTCGTGGATATGCCCAGGTTGTAAATCTACTGTGCCAAGGTTTAACAAGCCTTCCACACCAACCAGAGCGGTTAATGATGACGGAGGATCGCCACAGAAGATGTTTATCTCAGCAAATGTAGAGCAAACCCAACCTCAATCTGTGGATGAAAACCAAGACGTAAAGCAGCTGCTTATCGCCATTGGTGATCTTAGGAATGAGATTAGCTCTTTAAGTGATAATAACCGACAGATCAGGGAGGAACTGTGTCTGCTTAAAATTGATCTGGAAGATAGTAGATCTGAATCTAGGGCTCTTAGATCGGAACTGAAGGAGTTACGGAATGCATTGGTTGTCAGGAAGGACATCTTTGGTCAATCAAAGTACACAGCGCTGCCTGAAGTCCAACAAACTTCTGAAAGGACTGCAAAAAGGCAAGGAAAAAGTCACAGGgtggaaaataaaatagtgtCAGAGCCTCTACATGGAAATACTTCACGTGACTTAACAAATAGAGTCACGTTTGTGCCGAATCCTGAAACTGATATCTATAAGTCATCCTCAGAAACAGAGCCATCTGCCCATAAGGTCTCGGTTCCCACAGCAACTGCACAAAGAGAAAATTCTCAGCATGATAGCAACCTAGAAAGTGGACACTGGACAACAGTCGTCAATCGGCGTCGCCGAGTAACGATTCTTGGTGCTGGAGAAGATGATGAAGAGCTCCAAGCCGTAGAAAGCCTCAAAAAAATTCATCTATGGTCTCTGAAGGAAAGTACAACTGTGGAAAATGTCATTAGTTACATGGAAAGGAAAAATCCATCCGATCGACCTGGAATAGGACGAGGAGGAGGTGCTGCAATTTTGGCTTCTTCGGGATACCAGATCAGGGAAATTAACATTCCAATTGATACTAGTGGCACAGGATGTGACTTGTTTGTTCCAACTCGCTCAAGTATATCTGTACAGCCTAGATACGTCTATCCTGAGTGGTACACAACTCGAACTATTAGCCATATAAGAAAGAAAGCTTTTTTTCATCGTGGTTACAAAGCTTATGGCAATTCTTCAAATAGGACAGAGTTTATGAAATGGAGAGCTATGGTAAAACTAAACATTAAAGAGGACTTTGAACTATACAAAGGACAAATGGAAAATGATATAGCGAAAAACCCAGCCACTTTCTGGAACTATGTAGCATCTAAACGATCTTCTGGtagaataagtaaaaatattgtttataaggGCGAACTTCTTTCTGATCACCAAGCTGCAAGCAGTTTTGCTGAGCACTTTCATTCAGTTTACTCACCAAATCCCCCAGGATTGGACGCCGAAAATGCAATTCAGTTCATTAACAATAGTAACGCTAGAGTTCACATTTCGGCCATATTAGAGGATGATGTCAAACTTGCGATAAGAATGCTAAAACTTAAGCGTTCTGCGGGCCCAGATGGCATTCCTCCTTATGTAGTAAAGGATTGCGGTGCAGTACTGTTCAAGCCACTTCATCACATATTCCAACtttgttacaaaaatgtattttatccgGACGTCTGGAAACTCTCACGGGTAGTGCCAATACCAAAGGGTAAGGGATCAGACGTAACTGATTACAGGCCAATTGCGGTGTTGTCCGTTTTTGGTAAATTGTTTGAGTCAATTTTGCAATGGCGAATAAGTAGGCAGGTAGAAAGTCAACTTACAGACGCGCAGCATGGTTTCAGAAAGGGTCGTTCCACATGCTCAAACCTACTTGCTTTCTGGTCATGCGCAGTAAAATCTGTTGACTCTGGCTCGCAGGTGGACGCGGCTTATTTTGACTTTTGCAAAGCATTCGACACTGTGGACAATGACATACTCTTGCAGAAGCTATCGAGTGCCGGATTCACTCCTCATTTGCTCCGCTTTTTTAGTTCATATCTGCGAAACCGTCAACAATACGTTCAGTTCAAAGGGCATATTTCGGAGCCATACTATACGTTCTCAGGCGTGAGCCAAGGCAGTAATTTAGGGCCTCTGCAGTTTTTGTTAATGATCAACGATTTGCCTGAAGTTGTCATCACTGCAAATTGTCTGTTGTTTGCAGATGATCTAAAATTATTCATGGAAGTCAGAGAAGACAGTGATTGCTTTCTCTTCCAACAGGACATTGACCGAGTAAAGCAGTGGAGCAATcgcaacaaattatttttcaacgaACGAAAATGCTCTGTGGTTTCGTTTACCCGATCTGTTAATCCACTCATGGTGCAATATAGTCTCGGTGATGTTATTATTCCAAGAGTCAAAGTTATTAAAGATCTAGGAGTCTTTCTTAGTGATGACTTATCATTCAGCGTGCATATTGGTAAAATATGTGCTGAAGCATTTAGGACACTAGGATTCGTTCTGAGACAATCGCGACATTTGGATAGCATTCCAGCTATAAAGTCTCTTTATAATGCTTTTTCAGTGCACTTCCAAAGTCGCGTACGCAAGTACAAGTGCGATTCGTGCGGCGAACAGTTCCCGACCGCGAAGGCACGCACCACGCACGTGACGCTCACGCACGGCCAGGGGAAGTACCAGTGCACACTCTGCAGTGAGCTGCTGCGTACCAGCGATGAACGTAAGATTCATTACCTGATTCGCCACCCTGGTCGCTTCGAGTACCAATGCGTGGAATGCAACAAGTCGTTCCAGTACAAGTCCTCGTTGTACATGCATAAACAGGAACACTCAACTTTTAAAGTGTCATACGCTTGCACCTTCTGCGGGAAAGTGTTTCTGAAAAGGGACTCGTACCGCGAACATATACTAATTCATCAAGCGCCTCGACACGCCTGTTCCTACTGTCCTATGCGATTTGTGCAACGGTCCAATATGTTACGACACGAGCGCAGGCACACAGGGGAGAGGCCTTATTCCTGCAAGTACTGTCCGAGAACCTTCGCTGACAAAGGAGCTTGTACGTCGCATTCCAGGACTCACACACGAACTACTAAGTATGACTGCATCTACTGTGGTCAAACTTTCGCCCAGAAGTCCAAGTTGAAATATCATATACGGAAACACACCGGGGAAGGTCTGGAGACGTGCACCGTGTGCGCCAAAACATTCACGAGCGCTTGTTCGCTGCGGGAACATATGCGGATGCATGAGAGGCAGAAAATGGAGAAAACTGTCAAGTGTCCGCTTTGCCAAAACATGTATTCGGATGAGCGGGAAATGCTACGCCACTTGCGTTCGTCCCACGCCAGCTCCAAGTACAAGTGTCCGTTGTGTCGGAAAATTGTCACTTCCGCGAGCTCATTGCGCGACCACGTCATCAGTCATAGCCAAGTCAAAACTTTCCAGTGCAACATCTGTCCGAAGTCGTACTTCGCGAAAAAGTCCATGATGAAACACTTGGAGAAACGGCACTTTTTGCAGAAAAACATAGTTAAAATCAAAGTCCACTACCGCCATCTCCAACCCCACGAGTGCAACCTTGACCTCGACCCAGAGCTCATGGAGAAGATCTTCGGGAACCCCAACAAGAAACCCAACCTCGCCGAATTCAAGGTGAAAAGGCCAGGATTCAAAATGGATAATGTACCTACCgatgaaaaaagtaaaacaaaagaacataAGGATTCGATAAGtgaaaactttattaaaagtaTTCAGATAAAAGTTGAGCCGCAtagtggtgatgatgatgatgacgatgatgatacTGGAGGTAGAGGAGAAGTTCTTCCACCCGATTTTGTAAGTGTCAAAGTGGAATGTGTGCCAAAAGAAGAAGAGCCTGATACagaaattgattaa
Protein Sequence
MASGSEDSDDEPLSILALKNRNDSELEITPVFKKDEAKPKCIKMDSVSIALQPLYETTPVLEKPKDVWLYLTDLTATGPYSCLLCPEWFINRPRIVIHYAVDHKKDYCGICRYFVPNREAWQTHLEIHLPLKCSQCSVSCLSEKDLRDHFSSVHNLVHCRLCHLRLPDDHQYRNHLQKHFVKNVACINEDTLWDFQCKDNQKFKCLLCSKFVNIGKQFGDHFMSYHHLTLRCFMHFISGYDFPFNIKGVDLTPGFIATQLNAYSSFGYVDFQKTIKVKEELIQDEVYVTTNQYTEVKPMPRLNFVEDLRYSYDSKFYKGDEDFDVTHMELIILHQCYYDYVQEVLHEINSNIMPTISNINYANQADEPDNINCCLCEYECEGNRTLEVHMTKVHGVKNLPIYWCRVCAAVFNSVSQLEVHICQEFGEFVDLWICQFCDSEFINREETRKHLTNHWNEIEDDNCFSPHLGFKCKFCPTLFWNEIEREVHHVKDHYKIHTSDFYKCLHCDEIFGDKVFFTHHFIDKHGSEKPLYLLKCSICCLVLPTVNEMRVHFEEEHPKARKLYCSLDPCKFKPLCHRKSFLLHLKEGAKCNKCEGRYHRACVNIPDKVTLSSSWICPGCKSTVPRFNKPSTPTRAVNDDGGSPQKMFISANVEQTQPQSVDENQDVKQLLIAIGDLRNEISSLSDNNRQIREELCLLKIDLEDSRSESRALRSELKELRNALVVRKDIFGQSKYTALPEVQQTSERTAKRQGKSHRVENKIVSEPLHGNTSRDLTNRVTFVPNPETDIYKSSSETEPSAHKVSVPTATAQRENSQHDSNLESGHWTTVVNRRRRVTILGAGEDDEELQAVESLKKIHLWSLKESTTVENVISYMERKNPSDRPGIGRGGGAAILASSGYQIREINIPIDTSGTGCDLFVPTRSSISVQPRYVYPEWYTTRTISHIRKKAFFHRGYKAYGNSSNRTEFMKWRAMVKLNIKEDFELYKGQMENDIAKNPATFWNYVASKRSSGRISKNIVYKGELLSDHQAASSFAEHFHSVYSPNPPGLDAENAIQFINNSNARVHISAILEDDVKLAIRMLKLKRSAGPDGIPPYVVKDCGAVLFKPLHHIFQLCYKNVFYPDVWKLSRVVPIPKGKGSDVTDYRPIAVLSVFGKLFESILQWRISRQVESQLTDAQHGFRKGRSTCSNLLAFWSCAVKSVDSGSQVDAAYFDFCKAFDTVDNDILLQKLSSAGFTPHLLRFFSSYLRNRQQYVQFKGHISEPYYTFSGVSQGSNLGPLQFLLMINDLPEVVITANCLLFADDLKLFMEVREDSDCFLFQQDIDRVKQWSNRNKLFFNERKCSVVSFTRSVNPLMVQYSLGDVIIPRVKVIKDLGVFLSDDLSFSVHIGKICAEAFRTLGFVLRQSRHLDSIPAIKSLYNAFSVHFQSRVRKYKCDSCGEQFPTAKARTTHVTLTHGQGKYQCTLCSELLRTSDERKIHYLIRHPGRFEYQCVECNKSFQYKSSLYMHKQEHSTFKVSYACTFCGKVFLKRDSYREHILIHQAPRHACSYCPMRFVQRSNMLRHERRHTGERPYSCKYCPRTFADKGACTSHSRTHTRTTKYDCIYCGQTFAQKSKLKYHIRKHTGEGLETCTVCAKTFTSACSLREHMRMHERQKMEKTVKCPLCQNMYSDEREMLRHLRSSHASSKYKCPLCRKIVTSASSLRDHVISHSQVKTFQCNICPKSYFAKKSMMKHLEKRHFLQKNIVKIKVHYRHLQPHECNLDLDPELMEKIFGNPNKKPNLAEFKVKRPGFKMDNVPTDEKSKTKEHKDSISENFIKSIQIKVEPHSGDDDDDDDDTGGRGEVLPPDFVSVKVECVPKEEEPDTEID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-