Basic Information

Insect: Plagodis dolabraria
Gene Symbol: ZNF296
Assembly: GCA_963854805.1
Location: OY978467.1:15215469-15236227[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.012 2 10.7 2.6 1 23 14 37 14 37 0.92

2 11 3.5e-06 0.00058 21.9 1.5 2 23 226 247 225 247 0.97

3 11 0.0031 0.51 12.6 2.5 1 23 253 275 253 275 0.98

4 11 0.13 21 7.6 3.9 1 23 367 389 367 389 0.97

5 11 0.071 12 8.3 0.2 1 22 424 445 424 445 0.93

6 11 0.00029 0.048 15.9 2.8 1 23 456 478 456 478 0.97

7 11 0.0034 0.57 12.5 4.9 1 23 487 509 487 509 0.99

8 11 5.5e-05 0.0091 18.1 1.0 3 23 558 578 557 578 0.98

9 11 0.006 0.99 11.7 5.4 1 23 595 617 595 617 0.97

10 11 9.4e-07 0.00015 23.7 0.7 1 23 623 645 623 645 0.98

11 11 4.3e-07 7.2e-05 24.7 3.1 1 23 651 674 651 674 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.012	2	10.7	2.6	1	23	14	37	14	37	0.92
2	11	3.5e-06	0.00058	21.9	1.5	2	23	226	247	225	247	0.97
3	11	0.0031	0.51	12.6	2.5	1	23	253	275	253	275	0.98
4	11	0.13	21	7.6	3.9	1	23	367	389	367	389	0.97
5	11	0.071	12	8.3	0.2	1	22	424	445	424	445	0.93
6	11	0.00029	0.048	15.9	2.8	1	23	456	478	456	478	0.97
7	11	0.0034	0.57	12.5	4.9	1	23	487	509	487	509	0.99
8	11	5.5e-05	0.0091	18.1	1.0	3	23	558	578	557	578	0.98
9	11	0.006	0.99	11.7	5.4	1	23	595	617	595	617	0.97
10	11	9.4e-07	0.00015	23.7	0.7	1	23	623	645	623	645	0.98
11	11	4.3e-07	7.2e-05	24.7	3.1	1	23	651	674	651	674	0.98

Sequence Information

Coding Sequence: ATGGGTCGACACAAGAAACGGGTGCATTTGGCCGTTAGACACCAGTGTCGGATATGTTATAAGATATTCAATAGATTCGAATTGCTAGTGAAACATTTTGATATCAAACATGCTGAAGACAAGCTGGAAGGAGAACCATATGACTACAACGCAATCTTGCCCTACATAAAAGAACTCGAGGAACAGCTCAAAGAGGAAAAAGAGAAGAAACCAAAGACGGAAGACCCGTGGGACCTTCCCATGCCAGCGCAGGCAGCGGGTCAAGATACGGTGGCCAATGACGTTAAAGATGATACCTTGGTTGCTAAGGACGAGGAAAAgATGGAACCCTCGAACATGGTATTCTGTGAAGAACCCAAGGTGGATGTGGAACCGCTGCCGACTGCCAATGTGAACGTTGGTGATGGGCACCTCAACTACATAAAGGTGGAAGTGGAGAGAGTCGATGATGATGAGCCGATTGATGATCCGGATGGTGCTGATGATGGAGCCGCTGATGATCGGGACGATGATGATGACGGCGATGATGATCGGGATGATAAGTTGAAGAATGGGAAaaacTCCGGTTCTGACGAGGAGTACTTCCCGTCGGACACGTGGGCCCGTTCCCCCCCTCCCCTCCCCGCGGAGCCCCCCACCCCGACCCCGGGGGTGCGCAGCAAGAGCCAATCCTCCACCTGCCCCATTTGCCACAAAAAACTCAGCTCTAAGGGGTACCTGCGGGTGCATATGAGAGTACATACTGGTGAAAAGCCGTTTTCGTGCTATATTTGCAAGCGAGCCTTCATCACAGCGAACAAGATGCATCGGCACGTGTTGAGGCACGACGAGACCTGGGAAGACAAAGTTGGTGTGAAAACCGAAGGCGATGAGGAAAACGGTGTTGGTGGTGAGGACAAGCCCGGTGAGGACGCGGCCCGCGGTGACGCGGTCGTCAAGTCTGAACCTGGGGAAAAGGAAACGGACGAGAAGGAcaagaagaaaaaaaagaaaaaagttaagaagaaGGCACCCGTAGACAAGGCGAAATCTAAACTGTTGGCGAAGACGAAGAAGAGCTTCTTCGAGAAGAAGAAGGTGAAAAATGTCAAATGGGAACATgtctgtgaattctgtaatcaAAGGTTCCTCCACCTGGAGACGCTGGAGGTGCACCGGAAGTCACACTCCGAGGAAGACAAGGTCATCAGATGTCAATTCTGTCTCGAACCTCAACTCGACTGTGAAGCGCTGAAGGAGCATGAGGCGACACACAACGGACCGAAGCCCTACCTCTGCACCATGTGCGGGAACATGTACAAGAAGAAGGGAGCCATGGTGATACACAGGAAGACGCGTTGCAAGCAGGACAGCGCCGACAAAATGTTTGTGTGCGACATATGTTCAAAGCGGTACAACTCACATACTAAACTACAGCGCCACCTAGTGTCGCACTCGGTGAACAAGTTCAGCGTGCGGTACGAGTGCCCCGTGTGCGCGCACATGTTCCACACGCAGTACCACGTGCAGATGCATCTCCGCTCGCACATGAAGGAGGGGCTAATCCAAGAGGAGAACCGCAACGAAATCCTAGCCATGGTCCTCCAGAACGCGCGGAAGATCCCCAAGTCCACCGACGCGGTGTCCCCCAACTTAGCCGAAGCGATCCCGAGCGACGAGAGATCTAGAATATGCAACATATGCGGACAGATCTTCAACCATTTCTACTACCTGGAGGAGCATCTCAAGACTCACGGCTCCAAGATAGCCGTCATGGACCTGGACAAGGAGGAGGAGAAGAAGTATACCTGTCAGGTATGCTCAAAATCCTTCAAACTCCACTACTACCTCAAGCTGCACAGCTACACGCACACAAAGGAAAAGCCGTACATCTGCCAGCAGTGCGGTAAGGGCTTTATTACAAAGGGCAAACTAAAACGCCACCTGGAAACGCATCAGGGCCTTAAGAAGTACCAATGTCATATATGCTACAAGTTCTTCACCAGGCCGAGCTATTTGAGGATCCACGTGAGGACTATACATGGCACCCAGGACTATAACTTCGGTGGTTTTGGATTCGGTGTCCCTGTTGAAGCTATAACTAACGAATGTAACGATTctgtgtaa
Protein Sequence: MGRHKKRVHLAVRHQCRICYKIFNRFELLVKHFDIKHAEDKLEGEPYDYNAILPYIKELEEQLKEEKEKKPKTEDPWDLPMPAQAAGQDTVANDVKDDTLVAKDEEKMEPSNMVFCEEPKVDVEPLPTANVNVGDGHLNYIKVEVERVDDDEPIDDPDGADDGAADDRDDDDDGDDDRDDKLKNGKNSGSDEEYFPSDTWARSPPPLPAEPPTPTPGVRSKSQSSTCPICHKKLSSKGYLRVHMRVHTGEKPFSCYICKRAFITANKMHRHVLRHDETWEDKVGVKTEGDEENGVGGEDKPGEDAARGDAVVKSEPGEKETDEKDKKKKKKKVKKKAPVDKAKSKLLAKTKKSFFEKKKVKNVKWEHVCEFCNQRFLHLETLEVHRKSHSEEDKVIRCQFCLEPQLDCEALKEHEATHNGPKPYLCTMCGNMYKKKGAMVIHRKTRCKQDSADKMFVCDICSKRYNSHTKLQRHLVSHSVNKFSVRYECPVCAHMFHTQYHVQMHLRSHMKEGLIQEENRNEILAMVLQNARKIPKSTDAVSPNLAEAIPSDERSRICNICGQIFNHFYYLEEHLKTHGSKIAVMDLDKEEEKKYTCQVCSKSFKLHYYLKLHSYTHTKEKPYICQQCGKGFITKGKLKRHLETHQGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFGGFGFGVPVEAITNECNDSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01209602;
90% Identity: iTF_01209602;
80% Identity: -