Pdol043188.1
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- SMARCC2_1
- Assembly
- GCA_963854805.1
- Location
- OY978460.1:15508728-15542224[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-14 8e-11 43.6 0.1 3 44 548 589 546 591 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCAGGCGGTGCACTGAGCACGGCCCTAGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCTTCGCGCAAGGATCTGAACGTGCAAATGATGTTGGAGATAGAGTCGTCGCTGCTTGGTGCTGAGCTGATCCGCACTCCTTGCGTGTACATACGGCCGGAGGTGGACAAAGCGACCGCGAACAAAGTTAAGGATATCGTGAGCAACCACCAGGGAGAAATATGCGAAGACGAAGAGGACGCGACACACATCATTTACCCGACCGTGGACCCGTTGGAAGAGGAGTACGCGCGGCCAGTGTTCCGCCGCGGGAACCATTCTCTCGTGCATTGGTACTATCTGCCCGACAGTCACGACACATGGGCGCAGGCTGATCTACCAGTTGAGGTTCCGGAGAACGTGAGTTGGGAGTGCAGCCGGCCGGATCCGTGGCGAGTGACGGCCACGTGGGTGCTGGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAAGTAGACCACCACGGGAAGAAGAAGGTCCACAAACTACGGCTGTCGGTGGACGATCTCATCCCTGGTTCTGAGCCATCCAGTAAGAGCAAGAAGGGCAGCAAGAGGAAGCGGTCTCCTTCGCCGCCGCCTCAGAAGAACAAGAGAAAGAGtcgtGTGGCCAAAAGGCGTGAGAATGACGTAGAAGATGAAGACGATAGCGCGTCCCGAGATAACACCGAGGCGGTTCCTACTCCTGAGGCCGTAGAAAATGTAAAAGTTGAAACTCCGAGCGGGGCCGGAGGTACGGCGGAGGCGGGTGGGGTCGCGACGGGCGGCCCCGGCGGGGGCGGCGCGCCCGCGCCGGGGGAGGGGCCCTCCGCGGGCACGGgggccgcgccgccgccgccgctagACGGGCACGACGACTCGCAGGGGAAGCACAGTGACTCTAACACACAGGAAATGATTCCAAAAGACGAACTGGAAGACAACGTGACGGACCAGACGCACCACATCGTGGTGCCGTCTTACTCGGCTTGGTTTGACTACAACTCCATTCATACGATCGAGAAGAGAGCCATGCCTGAATTCTTCAACGGGAAGAATAAGTCCAAGACGCCGGAGATTTATCTGGCTTGCAGGAACTTCATGATCGACACGTACCGACTGAATCCGACGGAGTACCTAACGAGCACAGCTTGTCGTCGGAACTTAGCCGGCGATGTATGCGCCATCATGCGAGTGCACGGCTTCCTCGAGCAGTGGGGACTTATCAACTATCAGTTGGAAGCAGAATCTCGGCCAACAGGCATGGGCCCGCCGCCCACGTCTCACTTCCACGTGGTGTCCGACACTCCGTCGGGGCTGCAGCCCCTGCTGGCGCGCTCCGCCCAGCCCAGGCCAGGTGAGAATGTACCTAAGGTGGAGCCCGGGTTGCCGAACGGCGCTGAGTCGGGTGTCCCTCCGGCGGGTGCTGCGCCCCCCGCAGCGGCGCCCGCGCCCTCGGTGCCGCCTTCGGCCCAAATCAAACAAGAGTCCACCCTCGATCTTGGACTCAATCCGGGTCTTAAGCTCGACCAGTACCGCGGAGGGTGCCGCGGACGCGAGTGGTCGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCATCGCGACGACTGGAACCGCGTGGCGGCGCACGTCGGGACCAGGACACACGACGAGTGTATACTGCACTTCCTGCGGCTGCCCATAGAGGAGCCCTACCTCAATGATCCCGCCGCAGGTGGTGTCCTAGGCCCTCTTGCATACCAGCCCATCCCGTTCAGCAAGACTGGCAACCCCGTGATGAGCACGGTGGCCTTCCTCGCGTCCGTAGTGGACCCGCGCATCGCCTCCAAAGCGACGCGCGCTGCGATGGAAGAGTTTGCAGCTATCAAGgACGAGGTGCCGGCCGCCATGATGGAGGCGCACGTGAAGGCTGCAGGCGCGCACGGGCCCGCCGCCGCGCTCGCCGCCACAGGCATCGCCGGCACCGCGCCCGAACCCACAGGTGAGAAGAAAGATGGCGGAGTTGACATCAAGTCCGAAGCAATGGAAGTCGAAGAGAGCGAAGGACAAGTGAAAGTGAAAGAAGAGCCTTCCAGTGACGCTCCTGCGGCTGCGGCCGCCGGAGATGGCGCCGCTATGGAGCCTAAGACAGAAACTAAAGAAGAATCCTCACCACAACCCGCCGAAAGCGCCACAGTGGATGCTAAGCTCCAGTCAGCGGCTTCAGCAGCACTGGCAGCGGCCGCAGTGAAGGCCAAGCATCTCGCCGGCGTCGAAGAGAGGAAGATCAAGTCCCTGGTGGCGTTGCTGGTCGAAACTCAGATGAAGAAGTTGGAGATTAAACTTAGGCATTTTGAAGAACTGGAAGCTACTATGGAGAGGGAGCGAGAAGgtttGGAATACCAACGGCAACAGTTGATACAGGAGCGACAACAGTTCCACTTGGAACAATTGAAGGCAGCTGAGTTCCGTGCAAGACATCAAGCCCATCAAAGATTGCAAGCGGAGGGCGGGGCCGCAGCGCCTGTCGCAGAGCaagcgccgccgccgcccgagGCCGCGCCGCCCGCTGCCGCCGCGCATTCATAG
- Protein Sequence
- MKVFMDMKPGGALSTALATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMLEIESSLLGAELIRTPCVYIRPEVDKATANKVKDIVSNHQGEICEDEEDATHIIYPTVDPLEEEYARPVFRRGNHSLVHWYYLPDSHDTWAQADLPVEVPENVSWECSRPDPWRVTATWVLDLPQYNEWMNEEDYEVDHHGKKKVHKLRLSVDDLIPGSEPSSKSKKGSKRKRSPSPPPQKNKRKSRVAKRRENDVEDEDDSASRDNTEAVPTPEAVENVKVETPSGAGGTAEAGGVATGGPGGGGAPAPGEGPSAGTGAAPPPPLDGHDDSQGKHSDSNTQEMIPKDELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLACRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTGMGPPPTSHFHVVSDTPSGLQPLLARSAQPRPGENVPKVEPGLPNGAESGVPPAGAAPPAAAPAPSVPPSAQIKQESTLDLGLNPGLKLDQYRGGCRGREWSEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLNDPAAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPEPTGEKKDGGVDIKSEAMEVEESEGQVKVKEEPSSDAPAAAAAGDGAAMEPKTETKEESSPQPAESATVDAKLQSAASAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAEGGAAAPVAEQAPPPPEAAPPAAAAHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635369;
- 90% Identity
- iTF_01209216;
- 80% Identity
- -