Pdol048686.1
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_963854805.1
- Location
- OY978463.1:18284650-18298005[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-16 3.3e-13 50.9 0.0 1 39 84 123 84 128 0.93 2 2 4e-18 2.2e-15 57.8 0.0 1 43 292 335 292 337 0.95
Sequence Information
- Coding Sequence
- ATGATCTCATCTAAACTTCAAAAGGACAGACAGGACAAACCAAAAACACCTCGCCCTCTACACATAAGGCTACCAGAAGAGAAGCCAGCACCAGCGTCTCCCAGCCTGACGGAACAGCCCCTGGACTTGAGCGCCAAATCCACCTCCAGCGCCAGCGGCACCCCACCGCCCGATGCCAAGAGCTTGGATAATAGATTGAAACGCGCCATTTTAGACGGGGTTGGAAACAGCTCGACCAAACGGAATTACACAGAAGATGAGCTCCAGGCGGCACTCCGAGACATCCAGAGCGGCAAGCTGGgcacgcgccgcgccgccgtcgTGTACGGCATCCCGCGCTCCACGCTTCGGAACAAGGTCAACAAGTTCGGTCTCACAACCGATCCGCACGACTCCGAGCCGGACAGCGACGCCGAAGGAACGGATTCTCCTCCTTCGGTCATCCTCAAAATACCCACCTTCCCACCACCGGACGACAAAAGCTCGTCCCCCGCCACTTCAGTCACGACCCCCGTCACGCCGATAACGCCGATGCTTCCCAACCCGCAGCTAAACCCCTCCACCCAGCTGCTCCTCCCACCCTCTGTATTTGCCGACCCCCCCTCCTCTCAACACCTTTTCTCGCTCAACGACGTCATAGCAAAGAGCATTAGCCAAAAGTTCATCAACCAACACCCGCAGGACAGGCTCCAACACCACGAATTGTTCATGAGAGCGCCAGAGAGGCACGTTTCCGTCATCAAAACTCCTCCCGACAACCAGAGAAATCAGTACCAGGGGCCCAGCAATTCGAGGAGTCAGCCGAACAACAACGGGCAACAGGCGGCGGGCGGGAAGGGGACGAGGCCCAAGCGAGGGAAGTACCGGAACTACGACAGAGACAGTCTCGTAGAGGCCGTCAAAGCAGTTCAAAGAGGGGAAATGTCAGTGCATCGAGCCGGATCTTACTACGGGGTGCCGCATTCCACTTTAGAGTACAAAGTTAAAGAGCGGCACCTGATGCGGCCGAGGAAACGCGAGCCGAAACCACAGCCGGACGTGAAGCCACAGCCGCCAAAGCCACCGCCGCCGAAGCCGGCAACGAAGCCATTCTCGAACGGCATGAACGGTCCGGAGACGCCGGGGTATCCCCCCGGGTACCCCTTCTGGGCGGGCGCGAGCTTCGCCGCGCACCCTACGCAGGATCTGTACGCGTCACACATGATGCGGCGGCTGCGGGAGGAGGTGCCGCCGTCGGCGAATGGTTCCTTCCTGGAGGGGATCATCAGGTCTAGTTTGGAGCGGCCCGGCGCGGCGCTGCTGCAGCGGCTGAGCGAGCCGCGCGTGCCCATGGGAGAGTCGCCTAGCCTGGTGCGGCGACTGGCGGGGGGAGGCGGCGGGGCGGGGTGCGAGGCGGCGGCGGGAGGGGAGGAGGgtccggcggcgcggcgcgcacGCATCGGCAGCACGGACCGGCAGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCACGTAACGGCACCCCCACCCCGCCACTCGCCCCCGCGCTCTCCCCACCCGCGCCGCCCGACACCGCCTAG
- Protein Sequence
- MISSKLQKDRQDKPKTPRPLHIRLPEEKPAPASPSLTEQPLDLSAKSTSSASGTPPPDAKSLDNRLKRAILDGVGNSSTKRNYTEDELQAALRDIQSGKLGTRRAAVVYGIPRSTLRNKVNKFGLTTDPHDSEPDSDAEGTDSPPSVILKIPTFPPPDDKSSSPATSVTTPVTPITPMLPNPQLNPSTQLLLPPSVFADPPSSQHLFSLNDVIAKSISQKFINQHPQDRLQHHELFMRAPERHVSVIKTPPDNQRNQYQGPSNSRSQPNNNGQQAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPPPPKPATKPFSNGMNGPETPGYPPGYPFWAGASFAAHPTQDLYASHMMRRLREEVPPSANGSFLEGIIRSSLERPGAALLQRLSEPRVPMGESPSLVRRLAGGGGGAGCEAAAGGEEGPAARRARIGSTDRQLAAEMREAVQRLRADKLRPRNGTPTPPLAPALSPPAPPDTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818280;
- 90% Identity
- -
- 80% Identity
- -