Pdol019116.1
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- -
- Assembly
- GCA_963854805.1
- Location
- OY978448.1:1685273-1699284[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-14 1.4e-10 43.1 0.0 20 89 558 626 540 626 0.86
Sequence Information
- Coding Sequence
- ATGGACCACCCTGCCGCACACCTCTTTGTGGGCGATCTGTACTCGTTTGACGAGAACGTAGGAGATGGGAATGTTCGGACCGACCGCGTGATCGTATTCGACGTGTCTCCGGACTTAATGCGCAGGTGGCCTGCTCGGCCGCAAGCCAGAGCCATCCTTAACGAGCCCGGCATGTCCGCTTCGCTCGACGGACCGACAGGGAGTGACGCTGCTGACCGGACCGAACCTAAAGTGGACCCGGAACCAGTTGCCGAAGTGCCTAGTATGAGTGCCACGGCCGAGATCGTTACAAAGACAGAGTGTTACATGGACACCAATAGCAAGTCGGAGACCAGTGCCAAGACTGAGACAGGTCCCAAAACTGAAACTGATGACAAGTCTGACACTTATTCCAAGCATGAGACTGGTGAGGAGTCAGGAACACGTGCCAAGCCTCCGAGTGTTGCTAGGTCTATGGTTACTGCTATGTTGGCTTCAGCTAGTAGGTCTGCCATGGCTGGTAGTTCCACTATGACTAATGCTAGTACGTCCGCAAGGACTATAGCTGGTAACTCCTCAAGAGCTGGCGCTAGTTTCACACCAAGGTGCCATAATGGTTTGCATCTGCAGCGTAACCCGAACTCTAATGGGTCATCAAAGACGGCTGCTCCTACCAGCTCAAGGGCTGATGCTGACACCAGCTCAAAGACTGACGCTGGCACCAGCTCAAAGACTGATACTAAATCAGGGACTGGCACAAAGTCCAAGACTAATAACAAGTCTAGCCGAACCGCCGCTCGCAGATCGCAGATGGTGCGCGTGCCGTGGGATGACACTAGTTCTGATGATGAAGAAGTTACGCAGGAGAAAGACAGCAAGCGGCAGAAGCTAGACAGCGGTATCGGCGAAGGCACTACATCGAGCGGGGCTTCGCCCGACCAGAGCGGCTCACTTGATCAAAGCGTGGAGGCATTGCCTTTGAACTGGGAAGACGACGATCTGGATGACCTGCCTTGGTGCGTGTCGGAATCATCCGGCTCGGGTTCGAATTCCGACTCGGAGACGGAAGGCAGCAAGGGGAAGGTCCGCGGCGGCTCGTCGGACGTGACGCTGCTGTTCGAACTTAAGAGGAAGAAGCTCGACAGCGGCATCGGCGGCGAGCCCACAGAGACCAGGACCGCCACCGCTGGGGAAACCTCCAGGGGCACTCATGTCGAAGGTCGTTGCTTAGAGCGGCGTCGCGTCGGTAAGCGCGGGCGGGCGGGTGCCGGGGCGGGGGCGAGGGCGAGGGCGGGGGCGGGGCGCAGGGTGCACACGTCGGGGTCGGACAGCGGCGCGGACGCGGACGGAGACCCGGAGGGGGCCCCGGGGCCGCCCGCCGGCCGCGACCAGCGCCGCGTGCGCCTCTCGCTCGTGATGAAGCGCGGCGTCAAGGAGCTGCCCCTGCCGCACGCGCTCAAACACGTACAGAAAATCAAAAGAGAAGAAAAGAAGTATCTTCCCGTCACAGCGGAACTCTCAAGAAAAGCGGAGGAACTTCTCAAACCACCACCGCCTTGCTTTAAGCTCAAGTATGATACAAATGACAACCAAAGTCGTCTCAAGCTGAGAAACCAGTACATCAACCGAATTTCGTACCACTGGCATGCAGCAATTAAAGAGCTTACAGTCATTAGTTCAATAAATGACCCGAAAACTCAAAGAACACCTCTGGTTGAAGGTTTAGAGATAGACTTAGTTCGGCTATACCATGCCGTTCAGGATGAAAAAGGTTTATTGGCCTTCACACAACATCAATGTAAATGGAGCCTCTTTGCCAGGAAAATGAACCTTCCGGATACTCCCAAAACGGAGACGAACTTAgaaattatatacctaaaatatattttagactaCGAATCCATGTCAGCAGTTGAACGCTCTAAAGCGGAAGTAAATGTATTAAAACGTTGGGAGGAACGACAGAAGCTCGCTCAGAACCGCGCCGTAAATGTGCTACGGCGACTATATAGATAG
- Protein Sequence
- MDHPAAHLFVGDLYSFDENVGDGNVRTDRVIVFDVSPDLMRRWPARPQARAILNEPGMSASLDGPTGSDAADRTEPKVDPEPVAEVPSMSATAEIVTKTECYMDTNSKSETSAKTETGPKTETDDKSDTYSKHETGEESGTRAKPPSVARSMVTAMLASASRSAMAGSSTMTNASTSARTIAGNSSRAGASFTPRCHNGLHLQRNPNSNGSSKTAAPTSSRADADTSSKTDAGTSSKTDTKSGTGTKSKTNNKSSRTAARRSQMVRVPWDDTSSDDEEVTQEKDSKRQKLDSGIGEGTTSSGASPDQSGSLDQSVEALPLNWEDDDLDDLPWCVSESSGSGSNSDSETEGSKGKVRGGSSDVTLLFELKRKKLDSGIGGEPTETRTATAGETSRGTHVEGRCLERRRVGKRGRAGAGAGARARAGAGRRVHTSGSDSGADADGDPEGAPGPPAGRDQRRVRLSLVMKRGVKELPLPHALKHVQKIKREEKKYLPVTAELSRKAEELLKPPPPCFKLKYDTNDNQSRLKLRNQYINRISYHWHAAIKELTVISSINDPKTQRTPLVEGLEIDLVRLYHAVQDEKGLLAFTQHQCKWSLFARKMNLPDTPKTETNLEIIYLKYILDYESMSAVERSKAEVNVLKRWEERQKLAQNRAVNVLRRLYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -