Pdol006945.1
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- grh_1
- Assembly
- GCA_963854805.1
- Location
- OY978442.1:18972113-18984948[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-46 4.1e-42 145.7 0.4 83 221 1 135 1 137 0.96
Sequence Information
- Coding Sequence
- ATGCTTATGTTCCGAGAAGAAAAATCACCAGAAGACGAAATCAAAGCGTGGCAGTTCTGGCACGGGAGACAACACTCGGTCAAACAGAGAATATTAGACGCTGACACGAAGAACAGCATTGGACTCGCAGGCTGCATCGAGGAGGTCTCGCACAATGCCATCGCTGTTTATTGGAACCCGCTGGAGAGTGCTGCCAAgATTAATATCGCAGTGCAATGCCTCAGTACAGACTTCAGCAGTCAAAAGGGTGTAAAGGGATTACCGCTGCACATTCAAATTGACACCTTCGAAGACCCGAGAGACACACAAGTGTATCATAGAGGGTACTGTCAAATAAAAGTCTTCTGCGATAAGGGTGCGGAAAGAAAAACGAGGGACGAGGAGAGAAGAGCAGCTAAAAGAAAAATGTCAGCCACAAATAGAAAGAAGTTGGATGAGATCTACCACCCTGTGACGGAGCGCAGCGAGTTCTACTCGATGGCGGACCTTGCGAAGCCGCCCGTGCTCTTCAGTCCAGCGGAAGACATCGACAAATTAGCCGGAATGGATATTCAAGGGTTCTACGGACACGATGAATCGGCTCTGGCCGAAGCACACTTAAAGGGTGCCTCACCCTTCCTTCTGCACACGGCCAAGCCTCAAGCGCCGGCCCTCAAATTCCACAATCACTTTCCACCGGACGCGCCTGCGTACCGCGACGTGGGCGGTCTGTCCCCGTACAGCGACCGCAAGGACTCTGTGGAGCTGGAAGGCGCTGTAGTGAAGCGCGCCCGCACCGGCACGCCGCCGCTCAGCGAGCGCGTCATGCTGTACGTGCGACAAGACGCAGAGGACGTCTACACGGCACTGCACGTCGTGCCGCCCACCACGCAGGGCCTACTGCACGCCATTGAGAATAAGTACAAAATTTCAAGTTCGGCAATTAATAATCTTTATCGAAAGAACAAGAAAGGgaTTACGGCCAAAATTGACGATGAAATGTTGGCATACTATTGTAACGAGGATTTGTTCTTACTGGAAGTGAGGCCAGCAGGGGACAACGGGGAGGAGCGGCTGTACGACATTACATTTGTAGAGCTACCGCTCGAGCACTAG
- Protein Sequence
- MLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSIGLAGCIEEVSHNAIAVYWNPLESAAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMSATNRKKLDEIYHPVTERSEFYSMADLAKPPVLFSPAEDIDKLAGMDIQGFYGHDESALAEAHLKGASPFLLHTAKPQAPALKFHNHFPPDAPAYRDVGGLSPYSDRKDSVELEGAVVKRARTGTPPLSERVMLYVRQDAEDVYTALHVVPPTTQGLLHAIENKYKISSSAINNLYRKNKKGITAKIDDEMLAYYCNEDLFLLEVRPAGDNGEERLYDITFVELPLEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266945; iTF_00661995; iTF_01528043; iTF_01528958; iTF_00124930; iTF_00142854; iTF_00289388; iTF_00250220; iTF_00390126; iTF_00790961; iTF_00926353; iTF_00935443; iTF_00686100; iTF_00119369; iTF_00856362; iTF_01335690; iTF_00632523; iTF_01428813; iTF_00361374; iTF_00376862; iTF_01509343; iTF_00317877; iTF_00913367; iTF_00649786; iTF_00648873; iTF_00205821; iTF_00662849; iTF_00895681; iTF_00206755; iTF_00176869; iTF_00299910; iTF_00810759; iTF_01538503; iTF_00072040; iTF_01221256; iTF_00930985; iTF_00172490; iTF_00696267; iTF_00973483; iTF_00909516; iTF_00000079; iTF_00033583; iTF_00818127; iTF_01030895; iTF_00185072; iTF_00321360; iTF_00783185; iTF_00000946; iTF_00017106; iTF_00703698; iTF_00952466; iTF_00834387; iTF_00836275; iTF_00383380; iTF_00771636; iTF_00790005; iTF_00932181; iTF_00017942; iTF_00147062; iTF_00699862; iTF_00032664; iTF_00055160; iTF_00851480; iTF_00431897; iTF_00044221; iTF_00666269; iTF_00111358; iTF_00697086; iTF_01119040; iTF_00719969; iTF_00826580; iTF_00825342; iTF_00808863; iTF_00323232; iTF_01182430;
- 90% Identity
- iTF_00677297;
- 80% Identity
- -