Basic Information

Insect: Pimpla rufipes
Gene Symbol: -
Assembly: GCA_963932165.1
Location: OZ010632.1:15504316-15509388[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.14 12 6.9 2.7 1 23 325 347 325 347 0.98

2 17 0.012 1 10.2 0.5 1 23 396 418 396 418 0.98

3 17 0.019 1.6 9.6 0.2 1 20 480 499 480 501 0.94

4 17 0.76 65 4.6 2.3 2 23 542 563 541 563 0.96

5 17 9.4e-05 0.0081 16.9 0.0 1 23 640 662 640 662 0.96

6 17 1.7e-07 1.5e-05 25.5 0.3 2 23 700 722 699 722 0.97

7 17 0.0079 0.68 10.8 0.1 1 23 728 751 728 751 0.95

8 17 0.00032 0.027 15.2 0.0 2 23 759 781 758 781 0.94

9 17 0.00015 0.012 16.3 0.8 3 23 791 811 789 811 0.92

10 17 0.028 2.4 9.1 0.1 2 20 887 905 886 905 0.95

11 17 0.051 4.4 8.3 0.0 2 23 925 946 924 946 0.96

12 17 9.4e-06 0.0008 20.0 1.4 2 23 963 984 963 984 0.97

13 17 0.0011 0.092 13.6 0.2 1 23 1007 1030 1007 1030 0.90

14 17 0.2 17 6.4 0.3 2 23 1089 1111 1088 1111 0.96

15 17 0.0023 0.2 12.5 0.8 2 23 1139 1161 1138 1161 0.93

16 17 0.45 39 5.3 0.2 2 23 1170 1193 1169 1193 0.94

17 17 0.13 11 7.0 0.3 2 23 1253 1275 1253 1275 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.14	12	6.9	2.7	1	23	325	347	325	347	0.98
2	17	0.012	1	10.2	0.5	1	23	396	418	396	418	0.98
3	17	0.019	1.6	9.6	0.2	1	20	480	499	480	501	0.94
4	17	0.76	65	4.6	2.3	2	23	542	563	541	563	0.96
5	17	9.4e-05	0.0081	16.9	0.0	1	23	640	662	640	662	0.96
6	17	1.7e-07	1.5e-05	25.5	0.3	2	23	700	722	699	722	0.97
7	17	0.0079	0.68	10.8	0.1	1	23	728	751	728	751	0.95
8	17	0.00032	0.027	15.2	0.0	2	23	759	781	758	781	0.94
9	17	0.00015	0.012	16.3	0.8	3	23	791	811	789	811	0.92
10	17	0.028	2.4	9.1	0.1	2	20	887	905	886	905	0.95
11	17	0.051	4.4	8.3	0.0	2	23	925	946	924	946	0.96
12	17	9.4e-06	0.0008	20.0	1.4	2	23	963	984	963	984	0.97
13	17	0.0011	0.092	13.6	0.2	1	23	1007	1030	1007	1030	0.90
14	17	0.2	17	6.4	0.3	2	23	1089	1111	1088	1111	0.96
15	17	0.0023	0.2	12.5	0.8	2	23	1139	1161	1138	1161	0.93
16	17	0.45	39	5.3	0.2	2	23	1170	1193	1169	1193	0.94
17	17	0.13	11	7.0	0.3	2	23	1253	1275	1253	1275	0.96

Sequence Information

Coding Sequence: ATGGACGATGTTCTGGATGTCCGAAATGTCGAGAACTTGTGTAGATTGTGCCTTTCAACGGAGGAACCTATATCATCGGTGTTCGCCGATCAAGCGGCCGCCGTGTCGTTAGCCACGAAAATTCAGACAACCCTGTCAATTGAGATTCAAATCAGTGACAAAGTATCAACGTTGATATGTGCCAATTGCCTGAAGAGGGTCAACGAATGGCATACATACAAGGAAGCATGTTTGCGCTCCCAGGAGAAGCTTCAAAGATGCTTCGGAGAGCGCCTGGAAACTATACCAAACATAAAGATGGAGCCCATGGATGTCGAGGAGTCGCAGGACACTCTGGAGACGGTCCCGCTGACGTCCGACGAGGAGTGGGAGGACCTCCCCGACCTCCCGGCGACATCCAGCGTCGCGAGCGTCTGCGCGGAAGCTCCTCGAAACGGCGAGCTCAAGGACAGCACGACGATAAAGCGCGAGCTCttggaggacgaggagaacaACGCGAACGCGGAGATCGAGTCGGTCTGTAGCCGCGAGCTTCTGCTGAACCCGATGGCGGTGGCGGGCAACAAGGAGGACAGAATAATGGAAGCGGACTCGACGCAAAAGTTATTCAAAGTCACCAACCCTCTGGGAACCAAGCGAAAGGTGCGTCGCGGTCCCACGACGCACTACAGAGGCACGCGACGATACAAGCAGCGCTGTTCCTTCTGCCAGATATATTTGCACTCGAAACACTCGTACGGAAAGCACATGGAGCGATTTCACAGCGGCGCCGCGATCCCGGCGCGAAAAAAGCGAGCGAAGCGCGTGATAACGAAAACCGACGTCTCCGTGGAAGACAACAGCGGCGTCGCCGGCGTGGCCGAGGACGAGACCGAGGAGATGATCGAGGACGTCGAGGACGAGCTGATAAGCCTCGAGAAAGACGCGCCTCTCACTCCGGTACAGCAGAACATAATAAGCCAACTGAAGACTTTTTCGTGCTACACCTGCCAGGAATTCTTCCAGGACCGTCGCAGCACTCTCAACCACATTCGCCAGCACATGCCGGACCTCAGGCCCTACACGTGCATCGCCTGTCTCACCGAGTTCGCCGATCGCTCGATCTACAAGCTTCACTGCGGCGCCTCCTTCCAGTGCGCCATGAAAATCGCCCTCGTCGTCCCCGAACACGGCACCGAGAAGTACTTCACGTGCAACATGTGCCTCAGACCTCTGGCGAACCGCAAGGAGCTCCTCAGCCACTTGTCGAAGCACTCGGACAGGCAGTACGAGCAAATGATCGCGGAGCCCTTCCGCTCGCCCCCGAAACTCAAGCCCATGGCGCCCGTCGCCTCCACGCCGAGCAAAAGCCGCGGGAGAATGGAACTCAAGCCCCTCGTGAATCACGCGACCGGCAGGCTCGTCGCTCCCTACAAAAACGGCGATCCCGCGGCCAATCACATGTGCACCCTGTGCGGAATGATCTACAGATACAAACCCAACATGCTCAAGCATCTCGAGCTGTGCAAGAAGCTGTCGCTCGATGACCGCGTGAGCTATCGATGCATCTACTGCAGCATGACCTTCCTCACTCTCAAGCGTTTCCAATCCCACGTGAGCGTCGAGCACAGAACGCGCGAGCTCGTCTGCTTTCACTGCAAATCCAAGTTCCAGGTGCCCAAGGAGTACGCGGAGCATTACAAGAAGCACCGATTCGGGGGCAATCAACGGGCGATCCTCTCGCCGAGCAAGAGCGACCAGGCGCAAGCGAGCAGAGCGAGATCTTGGGGAAGCGGCTCGCGGGTCCTTCAAGGGGAATCGACGCAATCGAGCCTGAAGACCGCGCCTGGTTTCAGCTGCATTCTCTGCCCCGGAAGCACTTTTCAAACGCGGAATCTTCTCGCCGAACACCGAAAGATTCATCTGAAGCTCAAGATCTACTCGTGCGCGATCTGCCGACGAATGTTCGGCCGAGCTTCCGCCCTGGAGGCTCACATGGCCGATCACGAGCTCGACGTCTCGCTCAGCGAGATCGACGCGAATAGCTCGATTCCGCTGGCGGGCCGAGACGAGAAGATCAATCTCTCGATGAACTCCGATCCCGGTATCAACAACACCGAGTGCAACACCTGCGGCAAAGTTTTCGCCAATTATCCGAATCTCCGAAGACACATACGCACCGTTCACGACGCTATTGGACGTTACAGCTGTTTCACGTGCGCGAAAACGTTTAAGAGCGAGGATCTCTGGGCGGCTCACGTGGAGAGTGAGCACAAGCACATGGAGCCCGCGATCAGCTGTCCGCAGTGCCCGGAGGAGTTTGAGACGAATCAGGAACTCGAGGCGCATCGACGAGACGTTCACGGCGTCAACGGCGAGGATCATCTCGCGTGCTACATCTGCGGCAAGAAATTCGTCAACGAGTCGTCGTTGAGAATTCATCGGGGGCATCATTTCCGCGTCAACTCGCGGCTGAGCATCGGGAATCGGCAGCATCCGCTGAagCCCAGTCCACAGAAACCGCGAGTCGGCGGTTCCGTGTCGACGACTCAAGGTTCGACGGCGACTCATCATCGCGCCGACGAGGACTCCGCACCGAGTCCATCCTCGATCAAGTCTCCGCGAGCTCGAAAGTCTTTTCCCAATCCGAGTCCGACGAAGCAATTGCAGCAGGTGTTGCAGTGTCAGGTGTGCGACGATCGTTTCGCGGACGTCTCGAGCCTTCGCAAGCATCTCTGGGACGTGCACTGCGCGCGCAACAAGCCCGAGAAGACGTTCGCCGTGGAGAAGCTGCAGTGCGAGCTGTGCACGAACGTTCTGCCCGACGAGGAGAGCCTCGCGAGTCACATGAAGTGGCACGAGAGCAATCCGATACTGAGCAACGGCGGGAAGGACGAGGGTCCCGCGGAATGCGACATCTGCGGTAAATTTTACAGCACCCGGGCAAATCTCTACAAGCACAAGAAGCGACACAAGGCGCGAAACGCCGCGGCTCAGAAAATGCAGCCCGTGTCGAACAGAAACTGGGGCGGAAACGGATTCGCCTGCGGCGTTTGCCGCAAGGTATTCGCCACGCAAAACACCATGAAGAGGCACAAAGCGGCGGCTCACACGGCGTCGCAGAGTCGCGCGAGTTCCGCTCAAGCCTCGGCGAAGCGACTGTTCGGcggaaacgcgcgcgagcctcaGCTCGTGAAACCGATGCAACCGAAGTTGGACTTCGACTCGCTGGTCGATCGCGCGGACTTCGCCGCCGGTGCGACCGGCAACGCGAAGAAACCCGTGACGTGCACCCTCTGCAGGCAAATCGTGCCGAGCATGCGAGCGCTTTTCAAGCATCGGCAGACCGTTCACAAAATAACGGCGGGGAGGTCGCTCGCCAAGCCCGAGCTCGAGATGCTCGCCTCGATCAAACCGGAGCGGGGCAGCGAGGTGCAGTGCACGCTTTGCTCGAAGTCGTTCGCGAATCTTCCGAACATGAAGCAGCACTTCACGAAAGTTCACGGGCCGAGCAAAAGCTCGGAGCTTCGGTGCTCGATCGAGGGCTGCAAACTCGCGTTTAAGACCATCGCGGCGAAGGAAAATCACGAGAAGACTCACGTCAACGTTATGTACACGTGCGTACTGTGCCCCCGACAGTGTGTGCTGAGTCGCGCGGCGATTACGGAACACATGTTAACGGCCCATAAGACTAATTACGAGCCGGGAAATGGGAAGGTGACGCTCTGCaagaaaatcaacctggacagtTACACGGTGAAGGGCGCGACCGGACGGCAATGTCCGATGTGCAAAGTCAACTATCCCAATTTCAAAGCTATGAAGATACACTACCTCAAGGTACACGAGAATGCCGCTTAG
Protein Sequence: MDDVLDVRNVENLCRLCLSTEEPISSVFADQAAAVSLATKIQTTLSIEIQISDKVSTLICANCLKRVNEWHTYKEACLRSQEKLQRCFGERLETIPNIKMEPMDVEESQDTLETVPLTSDEEWEDLPDLPATSSVASVCAEAPRNGELKDSTTIKRELLEDEENNANAEIESVCSRELLLNPMAVAGNKEDRIMEADSTQKLFKVTNPLGTKRKVRRGPTTHYRGTRRYKQRCSFCQIYLHSKHSYGKHMERFHSGAAIPARKKRAKRVITKTDVSVEDNSGVAGVAEDETEEMIEDVEDELISLEKDAPLTPVQQNIISQLKTFSCYTCQEFFQDRRSTLNHIRQHMPDLRPYTCIACLTEFADRSIYKLHCGASFQCAMKIALVVPEHGTEKYFTCNMCLRPLANRKELLSHLSKHSDRQYEQMIAEPFRSPPKLKPMAPVASTPSKSRGRMELKPLVNHATGRLVAPYKNGDPAANHMCTLCGMIYRYKPNMLKHLELCKKLSLDDRVSYRCIYCSMTFLTLKRFQSHVSVEHRTRELVCFHCKSKFQVPKEYAEHYKKHRFGGNQRAILSPSKSDQAQASRARSWGSGSRVLQGESTQSSLKTAPGFSCILCPGSTFQTRNLLAEHRKIHLKLKIYSCAICRRMFGRASALEAHMADHELDVSLSEIDANSSIPLAGRDEKINLSMNSDPGINNTECNTCGKVFANYPNLRRHIRTVHDAIGRYSCFTCAKTFKSEDLWAAHVESEHKHMEPAISCPQCPEEFETNQELEAHRRDVHGVNGEDHLACYICGKKFVNESSLRIHRGHHFRVNSRLSIGNRQHPLKPSPQKPRVGGSVSTTQGSTATHHRADEDSAPSPSSIKSPRARKSFPNPSPTKQLQQVLQCQVCDDRFADVSSLRKHLWDVHCARNKPEKTFAVEKLQCELCTNVLPDEESLASHMKWHESNPILSNGGKDEGPAECDICGKFYSTRANLYKHKKRHKARNAAAQKMQPVSNRNWGGNGFACGVCRKVFATQNTMKRHKAAAHTASQSRASSAQASAKRLFGGNAREPQLVKPMQPKLDFDSLVDRADFAAGATGNAKKPVTCTLCRQIVPSMRALFKHRQTVHKITAGRSLAKPELEMLASIKPERGSEVQCTLCSKSFANLPNMKQHFTKVHGPSKSSELRCSIEGCKLAFKTIAAKENHEKTHVNVMYTCVLCPRQCVLSRAAITEHMLTAHKTNYEPGNGKVTLCKKINLDSYTVKGATGRQCPMCKVNYPNFKAMKIHYLKVHENAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -