Pruf015829.1
Basic Information
- Insect
- Pimpla rufipes
- Gene Symbol
- -
- Assembly
- GCA_963932165.1
- Location
- OZ010639.1:14754937-14772845[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 8.5e-06 0.00073 20.2 1.0 1 23 225 247 225 247 0.98 2 31 0.0037 0.31 11.9 1.9 1 23 270 293 270 293 0.96 3 31 0.00027 0.023 15.4 0.5 2 23 300 322 299 322 0.96 4 31 0.00027 0.024 15.4 0.4 1 21 342 362 342 363 0.95 5 31 0.0071 0.61 11.0 0.4 2 23 463 484 462 484 0.97 6 31 0.0097 0.83 10.5 0.2 1 23 490 513 490 513 0.91 7 31 0.00016 0.014 16.2 0.1 1 23 573 596 573 596 0.96 8 31 0.011 0.93 10.4 0.4 1 23 602 625 602 625 0.96 9 31 0.2 17 6.4 1.9 1 23 638 660 638 660 0.97 10 31 4.8e-05 0.0041 17.8 0.9 3 23 705 726 704 726 0.96 11 31 0.051 4.4 8.3 0.9 2 23 791 814 790 814 0.93 12 31 7.6 6.5e+02 1.4 0.0 2 23 823 845 823 845 0.83 13 31 0.11 9.5 7.2 0.0 2 23 852 874 851 874 0.95 14 31 3.2e-05 0.0027 18.4 1.2 1 23 882 904 882 904 0.98 15 31 0.5 43 5.2 0.3 8 23 958 974 950 974 0.82 16 31 0.00028 0.024 15.4 3.3 1 23 977 1000 977 1000 0.97 17 31 0.024 2 9.3 0.8 2 23 1007 1029 1006 1029 0.96 18 31 0.0047 0.4 11.5 5.2 1 21 1058 1078 1058 1079 0.95 19 31 0.011 0.98 10.3 1.7 2 23 1093 1114 1092 1115 0.92 20 31 0.1 9 7.3 0.9 1 23 1118 1141 1118 1141 0.95 21 31 0.066 5.7 7.9 2.9 2 23 1148 1171 1147 1171 0.91 22 31 4.1 3.6e+02 2.3 0.2 2 23 1179 1201 1179 1201 0.94 23 31 4.9 4.2e+02 2.0 0.0 2 23 1208 1230 1207 1230 0.87 24 31 0.31 26 5.8 2.7 2 23 1239 1261 1239 1261 0.96 25 31 1.7 1.5e+02 3.4 0.9 2 23 1267 1289 1267 1289 0.92 26 31 0.02 1.7 9.6 0.1 1 23 1346 1369 1346 1369 0.96 27 31 0.013 1.1 10.2 1.8 1 21 1397 1417 1397 1418 0.95 28 31 0.18 16 6.5 1.2 2 23 1522 1544 1521 1544 0.94 29 31 0.59 51 4.9 0.5 2 23 1551 1573 1550 1573 0.95 30 31 0.94 81 4.3 2.5 1 23 1584 1606 1584 1606 0.97 31 31 0.063 5.4 8.0 0.1 3 20 1615 1632 1615 1634 0.93
Sequence Information
- Coding Sequence
- ATGGAGACCAAGGAGCGATACGACGAGCTGTGCAGGCTCTGCGCCTCCTACGACGCCGTGAAAATGGATATTTTCGGGAAGGAGGGCAAGAATCGTCAGCTCGTCGACAAGATACAGACTTGTCTGCCGTTTAAAaTAGACGAGGATGACAGACTGCCAAAGTGTCTGTGCTACAGATGCATGTACAACCTGGAAAATTTCTACGACTTCAGAACGGCCTGCGTCAACGCCGTCGCCCTCTTGGAAAGATGTCTTCCGCCGGGCAGCAACGTCGCGGACAGCGCGGTGCAAAATGACGCGGAGAATAGCTCGGAGCTGCGGACGGAGCTGCTCAAGGAGGAGAAGATGCCGATTCTGATCCCCGAGGCGCCGATCGTCAATCCGAACGCGGCGCTCGGCACGCCGCCCAGACTGAACAGCGACGGCGAGGCCGATCAGGAGATCGAGGAGATTCTCGACGCCAGCGGCACCGAAGATGGCTTCGAGGACACCGAGGATCGCAAGTCGGACGAGTACGAGATGGACATGGAGACGAATCCGAGCGATTTTCTGGAAATGACGCCGATGGTCACCGAGGAGCTGGACGAGGCCGAGACGCCGAAGACCCCGAAACCCGCGGAGCCGCCACGCAACCCTGAAGTCTTTCAACACACGGCCGAGCAGCACGAGGTCTACGTCTGCTCGCTGTGCAACAAGGCGTTCAGCTCCAAAGGCCACTTGTCCCTTCATGCGAGGATCCACGTGGGCGCGGGCGACGTTATCGGCGCCAAAGTCGTCACGGACGATCACACGTCCTACAAGCGACCCTATCAGTGCGATCTCTGCAACAAATCGTACTCGACGGCGAAGCATCGATGGGGTCACGTGTCGACGACTCACAGGGGTCATCCGGCCGTGACCTGCGCCTACTGTTCGCGGATATACTCGACCCGTACGAACCTCGAGGAGCACATAAAATCGAGGCACACGGGTCTCCCGCCTCCCCCGGAGTTGCCGGTTCCCTACGTTCAGCCGGACAACAGATACAAGTGCAAAACCTGCCCGAAGATGTACACGACGGTGACGGAGCTGAACAAGCACGGGCGCGTCTGCCTGGGCGATCGGCCGAAGGAGAAGCCGAGCAAGAAGGCGGCGACCGCCGCGCGCAAGAGCAAAAGCCTCGTCGACACGTCGGACCCGTCGAGCACGGACACCGACAACGACAGCAAGGACTACAGAAACGCCGAGGCGAAGCTGTCGAAGAATCCGCAACTCACGATCCTCAAACAGGCGCTGACCAAGGGCGAGGGCTCGAAGAGGGACTACGAGGACAGAAACGCGTCGAACTACAATCTGCTCGAATTACCGAAGACagacGGTGTCGAGACCGACGGTCAAAAGCGCTGGTACTGCGAGACCTGCCCGCAGAATTTCTCCTCGGTCGATCGGCTGAAGGATCACGAGAAGACGCACGACGCGGAGCGCCCGTACATCTGCATCCTGTGCGAGAAGGATTTCGTGGTCAAGTCTTCGCTGAGCCGGCACATTCTGTCGTCGCACGGTGTCGACCCGACGCCGATAGTCGACAGCGATAAATGCCTCAAAAAGTCGGTCTTATCGCAGCCGTGGTCGAAGCAGCTGATAAAAACGGAGGGCAAGAAGCGCGAGGGTTCGGTGACGTCGGAGGACGCGGAGAGCAGCGCGCCGGGCAACAACATGATCGAGATCGAGACGGTCTTCGTGTGCGAAATCTGCACGCGCGATTTCAACGATCGCGCCTCGCTCTGGCTTCACATCCGCGCGACCCACAAGGAATGCGCGGCGTTCGCGTGCGGCGTTTGTCTGAAAATTTGCTCGGACAACGCGCAGCTTTTGAATCACGTCAACATGTATCACGGAGGTTCGAAGCTCCTGATTTCGGAGCAGCGACGATACAGCTGCACGATATGCGGACGGCAACacgattcgcgaaaaaaactcATGACCCACGTGTCGATTCACAACGTCGATCCCGGCTACGATCCCGCGAGTTTCGTTCAGCTGAACAGCAATTATTACAACGAGAACGTCAACAGCAACGAGGCGAACGACGCGCTGATGGATTTTGACACCGAGGACGGCGATAAGGTCGACTGCTATATATGCTACAAGTCCTTTCCGAACGAGGATCATCTTATTCGGCATCAGCGAAACGCGCACAAGTCGGAGCCGGTGGTACCGAGCGGCGCGGATCCCACGGCGACGAGCAACGGTTCGGGCGCCCCGGGAGTGAACGGCACCAAGGCCCAATATCACCTTTTCTTCGTCTGCGAGCTCTGCGGAAGTTCCCACCCGAGCAAGTGGGAACGTTGGCTCCACGTGAGCAGCAATCACAGCGACGAGCAGTCGATAAgaTGCGAGCGCGACGACTGCGGCAAGATCTTCGCCACGAAAACCCTTCGAAACGATCATGCCCAACACCACCTGATTCAAGGATCTTCCCCAAACACCTGCGAGGTCTGCGGCAAGCTCTGGGGCAGCCGTGTCGACTACTGGAAGCACGTGATGGGCGTCCACTCGGACACGGTTCCCCTGATCTGCGGTGTCTGCCTGAAGGTTTTCCCGGACGTGATGAAGCTCAGCGCGCACGTAAAATCATCCCACTGGCCTCTCACAAACGGCGACTTCAGTTGCGACGTCTGCGGTCGTCCCTACTCGAACAAATCAAAGATGTCGCGGCACCGAAAAATCCACGGCCTGGAGGTCGACAGCAACCAACCAACAGCAACGCCAACCGCAACAACAAATCTCGCAACCAACGGCGTCGTAAACGAGATCGCCACGAACGATTCTCTTCTCTACGAAAAAACCGCGGTGCCCGAGGCCGAATTGACCTGCGACTCCTGCGCCGATCTCACCTTCTACAACTGGGAGGATCTCTGCAATCATCGTCGCGCCATTCACGGCCTCTTTCCCTGCGATCTCTGCAACAAATGCTACGGTCGCACCTCTCACCTCTGGAAACACGTGAATCGCGTTCACAAAGGCCACAAGGACGTCACCTGTCGATACTGCATGAAAACCAGCGCCTCGAAGGATCATCTTGCGGCGCATATATCGAAGATCCATCGTTACGAACCCTACGCGAAACTCGGCGGCCTCCACGAACCTTCGGCGGGTTTCAAACAAACCACTGTGGAAGATGAGGGAACTCATCACTGCGACAAATGCAACAAGGGATTTCACAAGCGTTACCTGCTTCGTCGTCACATGAAGGGCTGCCAAAATTACCGCAAGGATCCCGGCGCTCTTCTCACTCGTTGCCGCGCCTGCGAAAGAATTTTTAAGGACCGCGCGAGTTTACAGAAACACGTGGAGAATCATCACAGCACCTACACGTGTCACTTGTGCGACGAGACCGTCACCTCGAAGCTCGGAATCATGACGCACAATCGCGTGAATCACATGGATCATCCGGATCTCACTTGCGATCACAGCAGCTGCAAGAAGCTTTTTAGAACGAAGGAGGATCTCGAATCGCATCGCAAGGATCACAAATACCACGGCAGCCCGAATGTCTGTGATTTTTGCGGCGATACAGTGGAAAATAAGCTGAAATTAAAGATGCACGTTTTGTCGTTGCATCGCAATGAAATCGGCGTTTCGTGCGGCGTTTGCTTGATTCCTATGAAGGATCCGAAGGACCTGAAAAAACATGTGGAGGATGAACACACGGGGGTTTTGCTGAAGCCGAATACCTGCCAGGTTTGCGGCAAGCAATACGCGTCCAAATGGAAGGCTTTTGATCACACGAAAAAATGCCACGGGAAGGTTTTTCGCACCTGCAAACAGTGCCTGGCGGTTTTCACCACGGATTCCGACATTCGTTATCACTACGAGCACATTCACAACGTGCCGAAGGATCAGCTCGCGGGTTTCGAGAATCGTCTCGACATCAGGACCGATGAATTCGATAATTCCGGGGTGGTCGTTAAGGAGGAGCCCGAGGATTACGACTACGAGTACGGAgtctgcgacgacgacgccttCGACTACAAGAGACGACGAAACGACACCTACGACTGCGATATTTGCCCGGAAATTTTCCTGAATCGCGACACGCTTTCCGATCACTACAGAAACGTGCATAATAAGGACCCTCAGCGGATGTTCAAGCGGGTGCGGCTTGACGGCGGTGGATCGCGGCGCCGGATGCGCGATCGCGAGAACTTCGAGTGCAAAAACTGCGCCAGGCAATTCTGCACCAAAACGCTTTTCTGGAATCACATAAACGTTTGCACGAGGCGAAATTCCGGGAGTCGCGAAGACGGCGGCGGAACTCCGCGATGTCCGACTTCGATACTCGAGGCGCAtctgaaaaacaacaacagaATCAAACGGGAGCCGCCCGAGTCGCCCGCTGCCAACGAATCCAATCTAAACATCCCGGACTTCAATCTCTTCGAGGACATAAATATGCAGCTTTCGGAGCAAAAACCGGTGCCGAATTTAATGCCGCTGTCGCAAATGCGACTGTTGAACAGCATGAAGTGTTCGCGAAAGGATTCGCGGAAGGTTTACGACGAATCCACGAACACGGAATGCACGTGCGAGGTTTGCGGGAAGCCGTGGCCGGCGAAGAAGCATCTCTGGCAGCATTTGATAAGGTTTCATcgggcggaggcggcggtCACGTGCGGCGTTTGCTTGAAGCTCTGCAGGACTTACGAGGAGCTCGCGGAGCATCTCAAAGAGACGCATCAGTCGATTCTCACGTGTGAAGGCAACAATTTCACGTGCAAAACGTGCGGAAGGTATCACAACGCGCGAAGCAAACTGCTGCTTCACATGAGCATTCATATAAACAGCACGGGGATCGCGTGGTGCCCGAAATGCGAGCAGAGCTtcgagagcgaggagaagcTCAACGAGCACGCGGCGACTTGTGATAAAAGGCAGCCGGATTATGAGGAGCATAGCGTGGATATCGAGAGCGATTTGAAGcgggaggatgaggaggaggaggaggaagagatgGAGGAGGAAATGGAGGAAGAgatggaagaggaggaagaagatgaTAAAGGCAGTTTAATTGGGGACGGAGCTTCGCTAGCCGGTGAAGTCGACTTTTCGGATCATCGGGCGAGTCACACGGAGAATTCGGAGGATTCGGACAGCAGCGGGGAAAGCGGAAgtgaggaggaagaggaggaggaggaggaggatgagaaTGAGGAGGCGGAGGATGAAAACGAGTCGAGGAGCAACAGCCGAGCGACCTGGGAGGCTAGTGAAGATGAGCGAGATTCGGATGACGAGATAGGTGAGGAGAAGGAGATTCAGGAGGCGAAAGTGGAGGCGAAAACGATGGAGAAGTCGGGCGCGAGTGACGAGAGGATTTTGGGGAAGAGTcgagaggaggaaggagaaaaagagacggggaaggaggagaaggatgcGAAGAACGTGAAGGAAGAGTCGAAGAATCATGATGAGGATGAATCCGAGGACGATGAGGAGGAacgcccgaaaaatcgaactGCCGGCGATGAAGAATCTGAGGACGAGGAACGAGCAAAAAATCGAGCTGCTGGCCACGAAGAATCCGAGGACGAGGAACGCGCGAAAAATCGAGCTGCCGGTGACGAAGAATCCGAGGACGAGgaacgagcgaaaaatcgagctGCCGGCGACGAAGAAtccgaggaggaagaggaacgcCCGAAAAATCGAGCTGCCGATGACGAATCCGAGGACGAGGAACGCCGGAAAAATCGAGCGGCGGCTGAAGACGATTCCGAGGACGACGGACCCCCCGTTTTGAGTCCTGTGATGCCGCTTTCCGAGGAACACGAAGCCGAGGAACAGGAAGACGTCGTGAGCCACAAACTCAGTCCGATGGTGCCGTTCAAAGTGAAAGGCCAAccacgaacaaaaaatccaatGTCGGCggcaaaatcgcggaaagccGAGGAGAACGAGGCTGAAAATTCTGAGtacgaggaggacgaagaagCTGCAGCCACGAGGaacgcaaataaaaattccgccGAGGAATTAGCCTCGGACGATGAAGCGCAGGCGGAATTGGTGgacgaggagaacgaggagaTGGATGAAGAAAGCGGGAGGATTCACGTGGTGAATCCGGACGACGAATATCATTCAGATGACAGCCAAGAAGCCAACGAATCGGCTgccgaggaggaagaggaagagcgaTTCGAGGGGGAACATTCGGAAATCgaggcagaagaagaagaggaggaggaagaagagcagattgaagaggaggaagaagaagaagaagacggcGTTCAAATTCACAATCTCGACGGCACCGTTTTGATGGTCGCCAAAGACGCCGACGGGAATCAAATACTGATACAAAAAAACGTCTCGGACATCGTGAACGACGAGTCGATGGAGGCCGTCACGGGTTTCATCTACGAGGACGAGACGGACTTTGAGGAGCTGCGGGGATTCGAggtggagcgagagggaagcgaggaagaagaggaggcgatggaggaggagaaggaggaggacgtAGCgatggaggaggaagaagaagaggaagaagagattCTAGAGGAGGAAAAGGACGAGACGatggaggaggaaaaagaggaTCATGAAAACGAAACGATGGAGGAATCGGTGGAGGAAAAAGCGAAAGGACGGgaagaggaagacgaagaatTGAGCGAAcgagaggacgaggagaaggaagaggaagtTCAAGAggtggaagaggaagaggaggaaagtGATGTACAGGATTCTAATACGAGTGCCAAAAGCGATGTGTCAAGGACGTAG
- Protein Sequence
- METKERYDELCRLCASYDAVKMDIFGKEGKNRQLVDKIQTCLPFKIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPGSNVADSAVQNDAENSSELRTELLKEEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILDASGTEDGFEDTEDRKSDEYEMDMETNPSDFLEMTPMVTEELDEAETPKTPKPAEPPRNPEVFQHTAEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVPYVQPDNRYKCKTCPKMYTTVTELNKHGRVCLGDRPKEKPSKKAATAARKSKSLVDTSDPSSTDTDNDSKDYRNAEAKLSKNPQLTILKQALTKGEGSKRDYEDRNASNYNLLELPKTDGVETDGQKRWYCETCPQNFSSVDRLKDHEKTHDAERPYICILCEKDFVVKSSLSRHILSSHGVDPTPIVDSDKCLKKSVLSQPWSKQLIKTEGKKREGSVTSEDAESSAPGNNMIEIETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPGYDPASFVQLNSNYYNENVNSNEANDALMDFDTEDGDKVDCYICYKSFPNEDHLIRHQRNAHKSEPVVPSGADPTATSNGSGAPGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSDEQSIRCERDDCGKIFATKTLRNDHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVMKLSAHVKSSHWPLTNGDFSCDVCGRPYSNKSKMSRHRKIHGLEVDSNQPTATPTATTNLATNGVVNEIATNDSLLYEKTAVPEAELTCDSCADLTFYNWEDLCNHRRAIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRYCMKTSASKDHLAAHISKIHRYEPYAKLGGLHEPSAGFKQTTVEDEGTHHCDKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHVENHHSTYTCHLCDETVTSKLGIMTHNRVNHMDHPDLTCDHSSCKKLFRTKEDLESHRKDHKYHGSPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHTGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQLAGFENRLDIRTDEFDNSGVVVKEEPEDYDYEYGVCDDDAFDYKRRRNDTYDCDICPEIFLNRDTLSDHYRNVHNKDPQRMFKRVRLDGGGSRRRMRDRENFECKNCARQFCTKTLFWNHINVCTRRNSGSREDGGGTPRCPTSILEAHLKNNNRIKREPPESPAANESNLNIPDFNLFEDINMQLSEQKPVPNLMPLSQMRLLNSMKCSRKDSRKVYDESTNTECTCEVCGKPWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCRTYEELAEHLKETHQSILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINSTGIAWCPKCEQSFESEEKLNEHAATCDKRQPDYEEHSVDIESDLKREDEEEEEEEMEEEMEEEMEEEEEDDKGSLIGDGASLAGEVDFSDHRASHTENSEDSDSSGESGSEEEEEEEEEDENEEAEDENESRSNSRATWEASEDERDSDDEIGEEKEIQEAKVEAKTMEKSGASDERILGKSREEEGEKETGKEEKDAKNVKEESKNHDEDESEDDEEERPKNRTAGDEESEDEERAKNRAAGHEESEDEERAKNRAAGDEESEDEERAKNRAAGDEESEEEEERPKNRAADDESEDEERRKNRAAAEDDSEDDGPPVLSPVMPLSEEHEAEEQEDVVSHKLSPMVPFKVKGQPRTKNPMSAAKSRKAEENEAENSEYEEDEEAAATRNANKNSAEELASDDEAQAELVDEENEEMDEESGRIHVVNPDDEYHSDDSQEANESAAEEEEEERFEGEHSEIEAEEEEEEEEEQIEEEEEEEEDGVQIHNLDGTVLMVAKDADGNQILIQKNVSDIVNDESMEAVTGFIYEDETDFEELRGFEVEREGSEEEEEAMEEEKEEDVAMEEEEEEEEEILEEEKDETMEEEKEDHENETMEESVEEKAKGREEEDEELSEREDEEKEEEVQEVEEEEEESDVQDSNTSAKSDVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -