Basic Information

Insect: Pimpla rufipes
Gene Symbol: -
Assembly: GCA_963932165.1
Location: OZ010633.1:12986858-12991770[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.14 12 6.9 2.2 1 23 381 403 381 403 0.94

2 19 0.021 1.8 9.5 0.5 2 23 449 470 449 470 0.96

3 19 0.048 4.1 8.4 0.2 1 23 552 574 552 574 0.91

4 19 0.0011 0.097 13.5 1.3 1 23 579 601 579 601 0.97

5 19 6.1e-06 0.00053 20.6 0.5 2 23 693 714 692 714 0.97

6 19 0.00084 0.072 13.9 2.7 3 23 721 742 719 742 0.93

7 19 0.00041 0.035 14.9 0.2 1 21 749 769 749 773 0.92

8 19 0.00056 0.048 14.4 2.8 2 23 870 892 869 892 0.94

9 19 6.3e-05 0.0054 17.4 3.9 1 23 965 987 965 987 0.97

10 19 0.00069 0.059 14.2 1.1 1 20 992 1011 992 1013 0.94

11 19 0.0023 0.2 12.5 0.4 2 23 1024 1045 1024 1045 0.96

12 19 1.7e-05 0.0014 19.3 0.7 2 23 1082 1103 1081 1103 0.97

13 19 3.3e-05 0.0029 18.3 1.6 1 23 1108 1130 1108 1130 0.95

14 19 0.00017 0.015 16.1 1.9 1 23 1136 1158 1136 1158 0.98

15 19 5.9e-06 0.00051 20.7 0.4 1 23 1174 1196 1174 1196 0.95

16 19 1.9e-06 0.00016 22.2 0.3 1 23 1202 1224 1202 1224 0.99

17 19 3.6e-05 0.0031 18.2 0.3 1 23 1230 1252 1230 1252 0.98

18 19 0.00019 0.017 15.9 4.1 1 23 1258 1280 1258 1280 0.96

19 19 0.0082 0.7 10.8 0.7 1 20 1286 1305 1286 1307 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.14	12	6.9	2.2	1	23	381	403	381	403	0.94
2	19	0.021	1.8	9.5	0.5	2	23	449	470	449	470	0.96
3	19	0.048	4.1	8.4	0.2	1	23	552	574	552	574	0.91
4	19	0.0011	0.097	13.5	1.3	1	23	579	601	579	601	0.97
5	19	6.1e-06	0.00053	20.6	0.5	2	23	693	714	692	714	0.97
6	19	0.00084	0.072	13.9	2.7	3	23	721	742	719	742	0.93
7	19	0.00041	0.035	14.9	0.2	1	21	749	769	749	773	0.92
8	19	0.00056	0.048	14.4	2.8	2	23	870	892	869	892	0.94
9	19	6.3e-05	0.0054	17.4	3.9	1	23	965	987	965	987	0.97
10	19	0.00069	0.059	14.2	1.1	1	20	992	1011	992	1013	0.94
11	19	0.0023	0.2	12.5	0.4	2	23	1024	1045	1024	1045	0.96
12	19	1.7e-05	0.0014	19.3	0.7	2	23	1082	1103	1081	1103	0.97
13	19	3.3e-05	0.0029	18.3	1.6	1	23	1108	1130	1108	1130	0.95
14	19	0.00017	0.015	16.1	1.9	1	23	1136	1158	1136	1158	0.98
15	19	5.9e-06	0.00051	20.7	0.4	1	23	1174	1196	1174	1196	0.95
16	19	1.9e-06	0.00016	22.2	0.3	1	23	1202	1224	1202	1224	0.99
17	19	3.6e-05	0.0031	18.2	0.3	1	23	1230	1252	1230	1252	0.98
18	19	0.00019	0.017	15.9	4.1	1	23	1258	1280	1258	1280	0.96
19	19	0.0082	0.7	10.8	0.7	1	20	1286	1305	1286	1307	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTGGAGATTGATGCGGCGGAGGGAGCGCAGAACGAGGATGCGATAGAGGCGACAGTGCCGGAGGTCTGTCGGGTCTGCCTCCTCGGGAATCTGATGATGCGGGATCTTTTCGTGGAGAACGAGGTCGTCTCGCTGTCCACGAAGGCCATGAACTTCGCCAGCGTGAAGATGCTACCGGGTGACGGCCTTCCCGGCCAGGTGTGCTGCGAGTGTGCTGACAAACTTGACTCGGCGTACGAGTTCAAGCTCCAGGTGGAACAGGCTGACAACCTACTGAGACAGAGATACGACTCGCTGAATATCAAGGAGGAGCTCTTCTTCAATGAGGTCGAGGTGCACCTGGAGGGAGAGCGTGGCGAGGACGCCCACACGTTGGAGGTGGACGAGCACTACCAGGCGACGGTGGACAGTCTGACTGCAAGCGAAGCGGAGGAGAGAAAGCCTATGCTTCTCAAGGATCACCTGGCTCTGCTGCAGGTGCAAAAGCTCTCGGAGCAAGAATGCGGCTCGGCCGCCGAGCAAAAAGATCCGGACGAGATGGAGGAGTCGAACGTCGCGGCGATTCTCGAGTCCACCGACGAGCACAGTCAGTATCTGCACGACAACGAGGGCAACAACGACGATATTCCGGGCTGCGAGGTGTACAGAGAGTCCGTGAAGGCGGAGGGGATGCACGAAATCGAGGGGATACCGATCGACGAGCACAACTATATAATGCAGCAGGATTACGCGTTGACGAGGCCGGACGAGGTCGAGCTGGAGGCCCAGGACAGTGTGGATTCGGGCGCCCACGAGTCGGCCGAGTATTTGTCGCTGATGGACGAGGAGATGAACGGAAAGGACGAGGCGAACACGACGGAAACGTTGGATTCCGTAAAGACGGAGGAGCAACAAcggcaggagcagcagcagcaacagcagcagcaacagcagcagcagcaacagcagcagcaacagccgcAGCAACCGCAAGAGCAGACGGAGAATCTCGAGACGTCACCGAGCGAGACGCGCCGAAGCAAGCGGAAACtgacgaaacgcgcgcgcgccacggacGAGGAGAGTTACTTTGAGAATCTAAACCTCAGCAGCCGACTCAAGAGATCGCAGGAGAAATCCGAGAAGGTTTATTTCCTCTGCTACCTATGTGACAAGCAATTCGTCTCCAAGTTGATACTCAAAGAGCACATGCACTCGCACGAGGAGGTGAGACGCGCGTTGTCGCTGAAAAAAACCGACAACAAGCAGGAGAAGCGACCGAGCGCGACGAAGGCCGCGCCTACATCGTCCGCCGCATCAGCCGCGTCGGCCGCGTCGTCCGGCAAGAAGCCCAACAGGTGTCCCTACTGCGGCAAGGAGTATCTCTACGTGATATCGTTCAACAAGCACCTGCGGCAGCACGAGAGAAGCAAGGACTCCGCGTCGCGCGACGCCGCGTCGATCTCGTTCGAGGATTCGTCGCTGCACGGCGACGAGGAGTCCTCGGACCAGGCGGGCTACGAGGACGCGCGAGTCAGCGAGTCGAGGAGCCGGGTGGAGGATCGCGcgaacgacgacaacgacgacgcggaggaggaggagagcgagGAAGCGCCGGGCCCGGGGCGAAAGAAGCGACGACGTTCGGGTCGCTCGGACGCCGCCTACTCGTGCGACAGATGCTCGGAGAAATTCGCGACGAAACGAGCGCTCGGCGAGCACAGCGCGGAACACAACGCGGTGATCTTCAGATGCAGCACCTGCGACCGGGAATTCGACGAGCTGGAGAAGCTGCGACGGCACCGTTCGGAGCATGTGGTGGAGGGAGTTCTCTCGGAGCAGGATCTCGAGGATCACGCGTACGAGCGGGATTACGAGGTCGAGGGAACGGACGACGGGGCGGAGATTtacggcggcgaggaggatcCGGAGGAGGGCGAGGAGATGCAGGAGGAGATCGCGGCCCGGGAGGACGAGAACGACGGTGGCTGGCAtttggcggcggcgacggcggaggACTACGAGAGCTCGCAGTGCAAGGAGAAAATCGAGGATATGGCGGAAAATTGGCCGGAATCGAGGGACCTCAAGTGCCCGAACTGCCCGATGACTTATTCGCAAAAGAAGTCGCTGGCGCGACATATGGAGAGCCACGAGGGCACTGTCTACGGCTGCAAGACGTGCAGGCAGAAGTTCGCGCGCAAGGATCATCTGCAACGTCACGTGGAGCAGCAGCACGCCAAGACCAAGTGCACGTTCAAGTGCACCGAGTGCGGCAAGATTTTCGGGAACGAGCTGACGCTGAGGAATCACCTGATAGCGACGAGCCACAGGACGGTGGTGCACGGTGAGGCGTACGACCCGAACAAGCGATTGAAGCGCGTCGCCGCGAAGGCGGCGCAGAGGATAATAGATAAGATAAAGACGGAAGACGGGCTCGAGGATtacggcgaggaggaggaggaggacgaggcggcggaggcggaggaggaggagacggAAGGGAGCGAGGTTCGAGGCTCGAAGGGCTGCGTGCGATGGGCGCGGAACGACGAGAAGGTTCATCCGACGGCATCGGCGCGAAAGGCGCAGCATCGCGGACGACGAAGGAGCGACCTGGAGTGCGAGAGCTGCGGGAGGAAGTGCAGCTCGAAGCAGTCGCTGACGAAGCACATGGAGCAGTATCACGTGAAGGAGGAGAAGCCGGAGACGGCGGCGATGAGGGCGGAGAAGGGCAAGAGGAGCGGCGGAGCGATTGAGGGAGCGGACCGGGCGGCCTGCGGGCAGCCGAGGACGAGCCACGAGGAGCGAACggaggcgacggcggcggtggatgaggaggaggaggagaacgaGGACGAGAATTCGGACTTCGAGAGCGGCCTCGACTGGCCGATGGACAACCACGAGTGCCCGACGTGCAAGAAGAAGTACAGCACGAAGAAGTCGCTGCTGCGCCATCAGCTGCTCCACGAGGAGCCGAACTTCGAGTGCGACATATGCAACGTCAAGTTCTACCGCAAGGACAAGCTCAAGTCGCACTACGACAAGTGCTCGGAGAAGAATCCGGATCAGGTGCGAAAGTGCAACATCTGTGGCGACAGCTTCGAGAACAACGAAATGCTGCGAGAACACCGGGGTAAGCACGTGGACGAGGGGATACTGACGGAGGAGGACCTGCGGGAGATCGAGCCGGACGAGAGGAGGGGCGACGGGAAGGTCGTGCGGAAGAGGCGCACCGACATCGTCGGCCTCGAATGCACCGAGTGCAACAAACGGTACACCTCGCGGAAGGGCCTTCTTCGACACATACAGGTGCACGAGGGCAAGAAGTACCTGTGCGACATATGCCCGAAGAAGTTCTACCGGCGCGAGCACCTGAAGATCCACGTTGCCAAGCACAACATGATAAAGCCGTACAAGTGCTCGCGTTGCACGAAGCGCTTCATAAAGGAGGATCAGCTGGCGAATCATCTGTCGAAGCACGACCGGACGTTCAAGAAGACGAAGGAGACCGACAGCTCGAAGCGCTTCCTCTGCGAGATCTGCTCGAAGAGCTTCACGCAGTCGACGACCCTGATTGCCCATCTACGGGCCCACAACGGCATCAAACCGTACGTGTGCGAGGTCTGCGCTCGTCCCTTCACCACCAACGCCTATCTCAAGATGCACATGCGAACTCACACGCAGGAGCGGCCGTACAGCTGCCAGTACTGCTCGCGGgctttcgcgcgcgcggacacgCTGGCGAATCACCTGACCTCGCACACGGGCGAGGCGAAATACCACTGCAAGTACTGCCCGAAGAACTTCCGGCGTCTCAAGTCCCTGAAAGAACACGTCTTCATTCACACCGGCCAGCGGCCGTACTCGTGTCCGACCTGCGACCGCCGTTTCAACAACAACGGCAGCCGTTACGCCCACAGCAAGCGCTGCAAGCAGAATCTACTGCAGAATCAGAATCGGCCGCAAACGatgccgcagcagcagcaacagcagcagcagcagcacacaACGATTGTGCAGACGACGAGCGCCGTACCGCAGCCGATAAGAATACACCAGCTGACCGGGGATCACGGGACGACGCAGATGCAGGTGGTGAAGTCGCAGAACATCAAGACGATCACGATCGCGAGGCCGGGCGATCAGGTGACCGCGCACCAGGTGATGCAGCATCAGGAGATACTCATGCCGCTGATTTTGCCGCTGACCGTCACCCTCACCGACGTCGACGAGGAGGTCATACTGCCCGAGGGCACCAAAATATTCACTACCGCTTAA
Protein Sequence: MDAVEIDAAEGAQNEDAIEATVPEVCRVCLLGNLMMRDLFVENEVVSLSTKAMNFASVKMLPGDGLPGQVCCECADKLDSAYEFKLQVEQADNLLRQRYDSLNIKEELFFNEVEVHLEGERGEDAHTLEVDEHYQATVDSLTASEAEERKPMLLKDHLALLQVQKLSEQECGSAAEQKDPDEMEESNVAAILESTDEHSQYLHDNEGNNDDIPGCEVYRESVKAEGMHEIEGIPIDEHNYIMQQDYALTRPDEVELEAQDSVDSGAHESAEYLSLMDEEMNGKDEANTTETLDSVKTEEQQRQEQQQQQQQQQQQQQQQQQQPQQPQEQTENLETSPSETRRSKRKLTKRARATDEESYFENLNLSSRLKRSQEKSEKVYFLCYLCDKQFVSKLILKEHMHSHEEVRRALSLKKTDNKQEKRPSATKAAPTSSAASAASAASSGKKPNRCPYCGKEYLYVISFNKHLRQHERSKDSASRDAASISFEDSSLHGDEESSDQAGYEDARVSESRSRVEDRANDDNDDAEEEESEEAPGPGRKKRRRSGRSDAAYSCDRCSEKFATKRALGEHSAEHNAVIFRCSTCDREFDELEKLRRHRSEHVVEGVLSEQDLEDHAYERDYEVEGTDDGAEIYGGEEDPEEGEEMQEEIAAREDENDGGWHLAAATAEDYESSQCKEKIEDMAENWPESRDLKCPNCPMTYSQKKSLARHMESHEGTVYGCKTCRQKFARKDHLQRHVEQQHAKTKCTFKCTECGKIFGNELTLRNHLIATSHRTVVHGEAYDPNKRLKRVAAKAAQRIIDKIKTEDGLEDYGEEEEEDEAAEAEEEETEGSEVRGSKGCVRWARNDEKVHPTASARKAQHRGRRRSDLECESCGRKCSSKQSLTKHMEQYHVKEEKPETAAMRAEKGKRSGGAIEGADRAACGQPRTSHEERTEATAAVDEEEEENEDENSDFESGLDWPMDNHECPTCKKKYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEMLREHRGKHVDEGILTEEDLREIEPDERRGDGKVVRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCSRCTKRFIKEDQLANHLSKHDRTFKKTKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYSCQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYSCPTCDRRFNNNGSRYAHSKRCKQNLLQNQNRPQTMPQQQQQQQQQHTTIVQTTSAVPQPIRIHQLTGDHGTTQMQVVKSQNIKTITIARPGDQVTAHQVMQHQEILMPLILPLTVTLTDVDEEVILPEGTKIFTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -