Pruf006834.1
Basic Information
- Insect
- Pimpla rufipes
- Gene Symbol
- clz9
- Assembly
- GCA_963932165.1
- Location
- OZ010633.1:11630821-11632230[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 0.00017 21.5 0.0 1 37 10 46 10 50 0.94
Sequence Information
- Coding Sequence
- atggaaaaagttaaacgaaaaaagtaCTCGGAGGAAGCATTGAAAAATGCTCTGGCGGCAGTCAAGAGCGGCCGTACCATAAGAAGCGTCAGTAAAACATTTGGAATTCCAAAAACGACGCTATTATACAAGCACAAAGGTATAATACCCATTGGAAAGAACATGGGACCGCCGCCCGTGCTGTCCCAAGACGAAGAAAACAAACTCGTATGTTGGATGATACAGGTGAGCGATCGGGGTTTCCCGATAACAAAGACACAGCTGATAAACAGCGTCGAACTGTTGATAAAGCAACTGAAGAAAGTGACGCCTTTCAAAGACGGCCGTCCCGGTCGTCACTGGTACGAAGCGTTTCTGCGTCGTCACCCCGAAATTTCGGAGCGTTTCTCGAGAAACGGTACGACCGCGAAGTCGTCGATACAGGAGAATTCGCTGCGGGAATGGTACGAGAGGGTCGAGCGATATTTGAAGGAGAAGGAACTGACGGAAATCGATACCTCGCGTATGTTCAACACGGACGAGATCGCCTTCTTTTTGAGTCCGAAAAATGACAATGTTTTGATAAAAAAGGGCGACAAAGCTTTGCACAATTTCGTGCCGTACGACGACAACGAGTGTCTGACGACGCTGTTCATGGCGAGCGCAAGTGGAATACTCGCTCCGCCGATGGTGATGCTGTGCTACGAGCGAATACCCTACAGCGTCTCGCAAAGCATACACGAATCCTGGGGTATCGGTAAATCGGACAGCGGCTGGATGACCGGCGAATCGTTTTACGAGTACATCGTTAACGTCTTCGAGCCATGGTTAACGACCAACGAAATACAGCGACCGATCGTTCTGTACGTTGACGGACACTCGTCATACTTGACGATGGCGCTCGATGATTTTTGCTCGACGAAGGGAATAGAATTGATCGCGCTTTATCCAAACGCGACGCATATAATGCAGCCGTTGGACGTTGCATTTTTCCAGCCGCTAAAAGATGCTTGGAGAAAAGCAACGCATCAGTGGCGATTGGATAACGCGGGAAAACGACTGCGCAAAGAGAACTTCGCCTCGGTTCTCGTTCAAGCCCTGAGCACCCTCGATATTGGGGAAATTATTCCCAACGGATTTCGCATGAGTGGACTGCACCCTTTCTCCGCGGACGCGATAAACCACACGAAAAATGCGAAACCAGCGCCGAATCCTACGATCGCCGCTGCTAATTCGCTCACTCGCGAAATGAACAAGAAGGGAAAGGAGGTGATGAAGCATTTGAAATTCTTCGAGGAGCACATCGAGGAGAGTTCGCTAATCGCTTTCCGCGACGCTGAAATTATCGGCAAATGGTACGGAGACAACAGAGACGAGagtctctttcttttttggcTGAAACTTCGGAGACTCGCGAATAATGAGACCTAA
- Protein Sequence
- MEKVKRKKYSEEALKNALAAVKSGRTIRSVSKTFGIPKTTLLYKHKGIIPIGKNMGPPPVLSQDEENKLVCWMIQVSDRGFPITKTQLINSVELLIKQLKKVTPFKDGRPGRHWYEAFLRRHPEISERFSRNGTTAKSSIQENSLREWYERVERYLKEKELTEIDTSRMFNTDEIAFFLSPKNDNVLIKKGDKALHNFVPYDDNECLTTLFMASASGILAPPMVMLCYERIPYSVSQSIHESWGIGKSDSGWMTGESFYEYIVNVFEPWLTTNEIQRPIVLYVDGHSSYLTMALDDFCSTKGIELIALYPNATHIMQPLDVAFFQPLKDAWRKATHQWRLDNAGKRLRKENFASVLVQALSTLDIGEIIPNGFRMSGLHPFSADAINHTKNAKPAPNPTIAAANSLTREMNKKGKEVMKHLKFFEEHIEESSLIAFRDAEIIGKWYGDNRDESLFLFWLKLRRLANNET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00652625; iTF_00414229; iTF_01497339; iTF_00343104; iTF_00057858; iTF_00905347; iTF_00059381; iTF_01364568; iTF_00721183; iTF_00058624; iTF_00840996; iTF_00398003; iTF_00459676; iTF_01379139;
- 90% Identity
- iTF_00652625;
- 80% Identity
- -