Pruf010355.1
Basic Information
- Insect
- Pimpla rufipes
- Gene Symbol
- ttk
- Assembly
- GCA_963932165.1
- Location
- OZ010635.1:14593053-14595254[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-14 7.9e-11 41.8 0.1 1 45 377 421 377 421 0.96
Sequence Information
- Coding Sequence
- ATGTCGGACATGGGGGCCGCGGGTGAGCAGCAGTTCTGCCTGAGGTGGAACAACCACCAGGCGAACTTCATCCAGGCGTTCGAGGGCCTCCTGATGGAGGAGACCTTCGCGGACGTGACCCTGGCCGTCGAGGGGGTCGTCCTCAAGTGTCACAAGATGGTGCTGGCCGCGTGCTCGGCGTACTTCAAGACCCTATTCTCGGACGTCCCGTGCTCGCATCCGGTGGTCTTCCTCAAGGACGTCAAGGTCACGGAGATGAAGGCGATCCTCGAGTACGTCTACAAGGGTGAGGTCAACGTCGCGCGCAACGACCTCGCGGCGATGCTGAAGGTCGCGCAGATGCTGCAGATCAAGGGCCTCATGAACACGGACGAGGCGCTACCGCCGTCCGAGCGGCCGTCGCCCGAGCGCCTCGACGACCAGAGGCCCAACGAGGAGGCCATAAGCACGAGCACGACGAGCAGCCACGGCGCACCGGCCTCGGAGTGCGGCGCTCACGGCGGCCCGCACGGCGGTCACTCGTCGCCTCCGCACTCCACGAGCTCGCCGTACTACGGCTACGGGAAATCCGCGGGTGTCCGCGAGAACGGCGCGAGATTTCCGCTTCCCGTTTGGGCCCTCGCGCAGGGTCTCCCGCTGGTCGGCCAGAATCCCGCGGCGGTCGGCGCGGCTCTTCATCcctcgctcgccgccgcccGGCACTCCTCGATATTCGGCAGCCTCTACGAGAATCCCACCGAGGCTGCCTCGGCGCACGGCAATCGCAAGGGCAAAATCTCCCTCGGCGGAATGATGCGGAATCACGACACGCCGATACTCCGCGGGGTCCTCGGTCAGGTTCACGCCGACAGCTCCCAGGCGGGCCAGCTCAATACCGGCGACGGCCACGAGGCGCACTATCATCGCAGCCACAGCAACGGATCCGCCGACAACGGCTCGGACGGCAGACGCAGCAGCATGGATCTCTCCAACGGGCATCCCGCGCACAGCCCGTACGCCACCGGGGCCTCGGTgatggacgaggacgagaagaAGCCCTCGCCACAGTCGTTCTCTGAGGACAAGAAAGCAGCTATCGCCAACTACGTTCCATCCCAGAAGCCCGAGTGGAAGCGCTACAAGCAGTACACGCGAGCGGACATAGCGAACGCCATAGCGGCCGTGCGAGGCGGCCTGAGCGCCCTGCAGGCGGCCCGCAAGTTCGGCGTCCCCTCGCGGACTCTGTACGACAAAGTGAAGAAGCTGGGAATAACGACCTCGCGGCCCGGCAGACGCACGACCAACGGCAGCGGCGCCTGTTTCCCTTACGGCGTCGGCGGCAACTTGAACGGCAGTATTTACGACAATATCTCGGAAAACGACACCGACAACGGCGCGGCGATGATggaaaatccggccgcggtgCTGGAGACCTCGTACGCCGAGAGTCGCGACAACTCGATGGATCGCGAGACTATGATGGAGCAGACGCGAAGTCCCAGTCCGCCGCTTTCGCTCTGTTAccagccaccgccgccgcagcagcagcagcagcagcagcagcaccagcagcaacagccgcAGCACCAACAacaccagcagcaacagcaggaACAGCAGGAACAGCTGAACGAAGAGAGCGACAACGAGGTGGAGGATCTTTCGGTAACACGCAGATCGGACATACGCGTTATAATGCCACCGAGCGTAGCGATCAAAGAGGAAGCatag
- Protein Sequence
- MSDMGAAGEQQFCLRWNNHQANFIQAFEGLLMEETFADVTLAVEGVVLKCHKMVLAACSAYFKTLFSDVPCSHPVVFLKDVKVTEMKAILEYVYKGEVNVARNDLAAMLKVAQMLQIKGLMNTDEALPPSERPSPERLDDQRPNEEAISTSTTSSHGAPASECGAHGGPHGGHSSPPHSTSSPYYGYGKSAGVRENGARFPLPVWALAQGLPLVGQNPAAVGAALHPSLAAARHSSIFGSLYENPTEAASAHGNRKGKISLGGMMRNHDTPILRGVLGQVHADSSQAGQLNTGDGHEAHYHRSHSNGSADNGSDGRRSSMDLSNGHPAHSPYATGASVMDEDEKKPSPQSFSEDKKAAIANYVPSQKPEWKRYKQYTRADIANAIAAVRGGLSALQAARKFGVPSRTLYDKVKKLGITTSRPGRRTTNGSGACFPYGVGGNLNGSIYDNISENDTDNGAAMMENPAAVLETSYAESRDNSMDRETMMEQTRSPSPPLSLCYQPPPPQQQQQQQQHQQQQPQHQQHQQQQQEQQEQLNEESDNEVEDLSVTRRSDIRVIMPPSVAIKEEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01497318;
- 90% Identity
- iTF_01207485;
- 80% Identity
- iTF_01207485;