Prap000915.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pieris rapae
Gene Symbol
nfxl1
Assembly
GCA_905147795.1
Location
LR990602.1:8773533-8777407[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 21 0.027 2.8e+02 1.9 0.6 4 10 169 175 168 175 0.96
3 21 3.1e-07 0.0032 17.6 15.9 3 19 186 202 185 202 0.95
4 21 2 2e+04 -4.2 0.5 6 10 227 231 227 234 0.47
5 21 4.3e-07 0.0044 17.2 13.6 3 18 239 254 237 255 0.91
6 21 1.3 1.3e+04 -3.5 1.3 6 10 280 284 279 284 0.89
7 21 5.2e-08 0.00053 20.1 11.8 1 19 290 308 290 308 0.99
8 21 2.9e-07 0.0029 17.8 18.9 3 19 345 361 332 361 0.88
9 21 1.2 1.3e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 21 5.3e-07 0.0054 16.9 16.1 1 18 395 412 395 413 0.97
11 21 5.4e-08 0.00055 20.1 18.0 1 19 422 440 422 440 0.99
12 21 0.54 5.5e+03 -2.3 1.0 5 10 468 473 468 473 0.94
13 21 0.0001 1 9.6 5.1 10 19 489 498 486 498 0.90
14 21 0.004 41 4.5 8.8 1 12 508 518 508 518 0.96
15 21 0.31 3.2e+03 -1.5 3.5 14 18 547 551 547 552 0.87
16 21 0.87 8.8e+03 -3.0 0.3 8 11 568 571 568 572 0.78
17 21 2 2e+04 -5.4 3.6 1 4 578 581 578 582 0.93
18 21 0.001 10 6.4 3.9 1 11 588 598 588 599 0.95
19 21 6.9e-05 0.7 10.2 17.2 1 18 628 645 628 646 0.84
20 21 1.4 1.4e+04 -3.6 0.9 5 10 663 668 663 668 0.91
21 21 0.00036 3.6 7.9 10.2 1 16 687 701 687 706 0.92

Sequence Information

Coding Sequence
ATGGCACGGAGATACCGGGATGCTGCTGCAAAGCTGCAGGAAAACATACACAAGCACTTAAAAGAAATAAGAGATCTTTCATCATCTGAAGATGAAGAGCCATATGAACCTAGTGTACTGGAGGGTGTTTTCCAGAGTTACTGGCGAGGTGGTGGTGATACGCACATGACTAACAGGACAAGGAATCTTCTAGAAGAAGCCTTAAGCGGTCGGTCTGTTACTTGTTTAATTTGCATTGGATCTATTAAAAGAGCCGATGCTATCTGGACATGTGACCACTGCCATTCCTATTTTCATCTTTCTTGTATTCAAAAATGGGCTAATGATAGCATAAATTTATGTTCCGAAGAAATCCAAGCTCCAATTGTAATTGTCAAGCGAAAAAATATTGAGTGGTGTTGTCCCAAATGTAGGACGACATACAGTAAAGAGGAAATACCACACAAGTATCGTTGCTTTTGTGGAAAAACTGATGACCCACCATACCACCCTTGGTTAGTGCCTCATACTTGTGGAGAAATATGTGGGAGAAAAATTTCATTTGGTGATAATTGTAAACATAAATGCTTATTACTGTGTCATCCTGGTCCATGCCCTCCATGCCCTCAAACAATTAATGGAATATGCTACTGTGGAAATGAACAAAAACGAGTTAGATGCAGTGCACCCAAATGGTCTTGTGGTGAAACATGTAATAAATTACTTCCTTGTATGTCTCATAGGTGTGAAAACATTTGTCATGAAGGTGAATGCTCACCTTGTCATTACACTAGTCTGCAGCTCTGTCTCTGTGGCTCAGAAAAAGCAAAACGACCATGTACTGATCTTTTCTGGCAGTGTTCTAAAGTTTGCAATAAAAAATATTCATGTGGGTTTCATGATTGTTTGGATACATGTCACTCTGGGTCCTGTGGCCCTTGCCCAAATTCTGGCCTCAGGACTTGTCCTTGTGGAGCTATTCAACAGCATGTACAATGTCCAGATTCTATAGAAACATGTCTTAGTACCTGCGGGAAAAGGCAAGAAGGTTGTGAACATACTTGCCCCGAAAAATGTCATAAGGGACCATGTCCACCTTGTCAAGTGATGGTTGAAAAGAAATGCCATTGCTCTACACATGCACGATCATTACCATGTAGTAAAGACTTTAGATGTGATACCAAATGCAGAGGCATTAGACCTTGTGGGAAGCATGTTTGTGCTCGTAAATGTTGTAGTGGTAACTGTCCTCCATGTGAAAAACTGTGTGATAAACCATTGCAGTGTGGCCGTCACAAATGCCCAACAATTTGTCATCATGGGCCTTGTTATCCTTGTCCAAGGGAATCAAAAATTATGTGCCGTTGTAAAGAAACATTTATCACAGTACCATGTGGCAGAGAAAAACATGTAAAGCCCCCTAAATGTAATCAAATATGTAAAATTAAGTATAAGTGTGGGCATATTGAAGAAAACAAACATTTCTGCCATTTTGGTGACTGTCCTCCTTGTAAAGCTGTGTGTAACAAATCTTATGAGAAATGTGGTCATAAATGCAAGGCCCAATGTCATGAATATGTTACGGTTGTATTTAAGCAAGTTGAAAAACCAGCAACACCTTGGGAGGTTCAGCCTCCAAAGACAAAAGTTGTAGCTTTGGATTGCCCACCTTGTGAGGCTCCTGTAACAGTTATATGTTTTGGAGAACACGATTCTGAACTGCAGCCCTGCCACTTAGCATCACGCCGCTGCTGTGGGCGGCACTGCAACAAAAACCTGGATTGTACCAACCATAAGTGTTTACTACTATGTCACTTATATAGCCCTGATTCAAATTATCCAAATGTGCCTTCCTCATGTAGACAATGTGATAGGGAGTGTTCCGTGCCTAGACCAGCAGAATGTTCTCATAAATGTCCTAAACGTGCTTGTCATCCTGGACCGTGTCCACCGTGTGAGGTATTAGAAAGAATTAAATGCTTTTGTGCTGTTACAGAGATATATTTACGGTGTAGAGAGCTTTGTGCTGCTAATGATGAAACATTAAGCTGTAAGCAACAATGTCCCAAGAATTTAGCATGTGGACATAGGTGTAAAAAATCCTGTCACAAAGATAGCTGCAGAGAGAATCAAATCTGTATGAAAAAAACTAAAGTACACTGTTCTTGTGGTAATTTGAAGAAAGAAGCATCTTGTAATTTGGTGCGATCATCTGAAATAAAAGTTGACTGTGACATTTCTTGTGAAGCAAAAAAGTTGGCAGTTAAATGTGAGAAAGAAAAGGAACAAAAGCGATTGAAAGAGTTAGAAGAGGAAAGAAATCGCAAAGAACTTGCAGAATATGAATGGAAACTCAGCGGAAAAAAGAAAAAACACAGAGAAAAAAAAATGATTATCAATGAAGACAATAGAAATTTTTTACAAATATACTGGGTTCCTATTTTAACTATTTTAATTGTAATTTTGTCAGGAATTCTATATATTATAAATTTTTCAGGGGTGTAA
Protein Sequence
MARRYRDAAAKLQENIHKHLKEIRDLSSSEDEEPYEPSVLEGVFQSYWRGGGDTHMTNRTRNLLEEALSGRSVTCLICIGSIKRADAIWTCDHCHSYFHLSCIQKWANDSINLCSEEIQAPIVIVKRKNIEWCCPKCRTTYSKEEIPHKYRCFCGKTDDPPYHPWLVPHTCGEICGRKISFGDNCKHKCLLLCHPGPCPPCPQTINGICYCGNEQKRVRCSAPKWSCGETCNKLLPCMSHRCENICHEGECSPCHYTSLQLCLCGSEKAKRPCTDLFWQCSKVCNKKYSCGFHDCLDTCHSGSCGPCPNSGLRTCPCGAIQQHVQCPDSIETCLSTCGKRQEGCEHTCPEKCHKGPCPPCQVMVEKKCHCSTHARSLPCSKDFRCDTKCRGIRPCGKHVCARKCCSGNCPPCEKLCDKPLQCGRHKCPTICHHGPCYPCPRESKIMCRCKETFITVPCGREKHVKPPKCNQICKIKYKCGHIEENKHFCHFGDCPPCKAVCNKSYEKCGHKCKAQCHEYVTVVFKQVEKPATPWEVQPPKTKVVALDCPPCEAPVTVICFGEHDSELQPCHLASRRCCGRHCNKNLDCTNHKCLLLCHLYSPDSNYPNVPSSCRQCDRECSVPRPAECSHKCPKRACHPGPCPPCEVLERIKCFCAVTEIYLRCRELCAANDETLSCKQQCPKNLACGHRCKKSCHKDSCRENQICMKKTKVHCSCGNLKKEASCNLVRSSEIKVDCDISCEAKKLAVKCEKEKEQKRLKELEEERNRKELAEYEWKLSGKKKKHREKKMIINEDNRNFLQIYWVPILTILIVILSGILYIINFSGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01204545;
90% Identity
iTF_01204545;
80% Identity
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