Prap017648.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- GATA5
- Assembly
- GCA_905147795.1
- Location
- LR990599.1:7990863-8013436[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-17 6.2e-14 51.5 3.7 1 35 487 520 487 521 0.98
Sequence Information
- Coding Sequence
- ATGTGTAACTTGCCGCCGAAGTTCCATTCAGTGTGTCGCCTTTGTTTATCATTCTGTGGCGATAATTGCAGTGATGTTAAACTTCCAATATTCGACCGTGATAAGGATAAATCACGACTTTCCGAGATGATAATGGCTTATCTATCGATAATGGTTTCTCCAGAAGACATGTTGCCGCAGGTTGTATGTGGAAGTTGTGCAAACAAACTTGATGAGTTTCATACATTCAGGGAACTATCACATAAATCTGAAAGATTATTGGAACAATTTCTACACTATGCTAACTCACTATCAGGTCCTATAGAGGAGGTCCTCAGTATAACGGCCGACAAACTGGAAGAGATAATTAAGCCGTTGAACGATAATGAGTATGATCTAAAGAGTAAATATGCAGAAATCGGCTCGCCTGATTCAACCGAAGAGATGAAAAACTTAGAGAGCCGACAGGCGGCGGTAACACTGCTGCAAATAAAAAACTACGATCCAACGAAATATGTTGTCAAACCCGAGACGGAAGAGAACTCGAATATAATGTTCAAAACAGTGAGTCTACCGCCCTCCGATAGAGCGAGTGAGGTAATGCATTGTACAACAGTGATAGATATAATTAGCAAGGCTGTCGCGGTAGCACAGCGGGAAAACGAGGAATCACAGTATCCGACAAATTATGCGGGCGTTACTGACAAAACGCACGCGGCGTCCGAATATACTCAAGACTATGTTGACGAACAGTATGCCCAGAATACGCCCCAGAGTGTCACGAATCTACCCAATAACGAGGAGCACAGAGAGATGGACCTCTCACTGTACTCCTGTAAGACAGAGTACGATGGTGAACAGGGCAGGGAGCCCAATGCCTACACACATAGAACCAGTGATATTTCGCATAAGGACAAAATGCAACATTTCTATGCCAGAGCGTGCGTGAGGACAAAGCCGGCGAAGGAGAGTTCGGTGTATGAGGATTGTAGTCAAAGCAGTAGCGGCTCAGATCCGGACAGACTTCAGATGGACATATCGGAAGTGTCGCAGGACGATCCAGAAGAAACACAATCTGTGCCGTCTGCGCAGTCATCGCCAAAACCACCACACGAAACGGAAGAAAAGGAGTCATTATGGCATGCTCTACATAAACAAAACGGTCGTGGTGGTGAAACAACACAGCTTCTAAGGCGACTGATTAACAGTAAGCATACTGGCATGACGGTGTCACCTTTGAGGGGACTCGCTGTACCACTAACCCAAACACCCAACGGTACCGTTTCACCGAACGGTGAATGGCCGAGTCCTGGTCGTGGTAACATGGGCGCAGGTGGAACAGCGAGAAGGAAACAGAGTTGTCCAGCACGAGCACAGCCCTTGCAGGATCAACATCCCACTTGGCCAACTAACACTGATAATGAAGCAACAGACACGTCAAACTCACATCGTAATCCATCACAGCGCTTTGAGCTCTCCTGCACCAATTGTGGTACACACACGACCACCATTTGGCGTCGCGATGCCAGAGGCGAAATGGTGTGTAACGCGTGCGGATTGTATTACAAACTCCATGGAGTTCCACGACCTACCGCAATGCGACGGGACACCATACACACTAGACGCCGTCGTCCCAGACATGAAGCAAAGTCTTCTCGATCTAGGCGACGAGGAGTGACCGGCGCCAGTACCGAGGTCCCTGAGAGTAGTGAACCAGCTGGTGGGGCACCAGGGGCTCCACCATCAGAAGGGGCAGAAGAGGCAGTATTGGCAGCGCTTCGTAGGCAATTGCAGCCGCACCTCTTAGCCGCCTTACATGCGCGCACTCGACCAGCACAGATGGGCCGCAGTATGCCAGAGTATGACGAAGCGCCACTGAACCTAGTGGCAAATCACGTGGCTGAAGAAACGCATTGA
- Protein Sequence
- MCNLPPKFHSVCRLCLSFCGDNCSDVKLPIFDRDKDKSRLSEMIMAYLSIMVSPEDMLPQVVCGSCANKLDEFHTFRELSHKSERLLEQFLHYANSLSGPIEEVLSITADKLEEIIKPLNDNEYDLKSKYAEIGSPDSTEEMKNLESRQAAVTLLQIKNYDPTKYVVKPETEENSNIMFKTVSLPPSDRASEVMHCTTVIDIISKAVAVAQRENEESQYPTNYAGVTDKTHAASEYTQDYVDEQYAQNTPQSVTNLPNNEEHREMDLSLYSCKTEYDGEQGREPNAYTHRTSDISHKDKMQHFYARACVRTKPAKESSVYEDCSQSSSGSDPDRLQMDISEVSQDDPEETQSVPSAQSSPKPPHETEEKESLWHALHKQNGRGGETTQLLRRLINSKHTGMTVSPLRGLAVPLTQTPNGTVSPNGEWPSPGRGNMGAGGTARRKQSCPARAQPLQDQHPTWPTNTDNEATDTSNSHRNPSQRFELSCTNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHEAKSSRSRRRGVTGASTEVPESSEPAGGAPGAPPSEGAEEAVLAALRRQLQPHLLAALHARTRPAQMGRSMPEYDEAPLNLVANHVAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206195;
- 90% Identity
- iTF_01205366;
- 80% Identity
- -