Prap006485.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- Ncor2
- Assembly
- GCA_905147795.1
- Location
- LR990585.1:3309892-3355830[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 1.8e-05 24.9 0.0 1 43 407 449 407 451 0.97 2 2 0.00021 0.26 11.6 0.0 5 46 818 858 818 858 0.95
Sequence Information
- Coding Sequence
- ATGGTGTGGTCTGCGCCATCGGGGGAGGTCTTGATTGACATCATATCAAGGCCCGGGCAGAACGAGCACGGGCACGGTGCACTGGCGTACGGCGGCAAGCAGGTGGGCGTGGCGCAGGCGCGTCCCGCCGCCCCATACGCACCTAACTATGCGCCCGCGCAGCTGCGACTGCATCAGGCCTCCTACGGCTCCGCTCCGCTTTACAGCTATGGGCGAGCGGGTGGCGAGTACCGGGCGGGCGCGCGAATGTCGCTTCTGGGCTCGGCCTACCTGCCACCGCCGGCACCGCCTGCCCACCATCCACCGCCCGCTGACCCTCCACCTTTCAAGAAGATCCGCCTTGCCGCAGACCACCATCCTCAACAGCTTAGAGTCGATACGAGGGAGCCCGTTATGAACTCATATAGCACGGTGGAGGTGCTGTCGCCCAATCCGCCCTCGGAGCCAACCATCGAAGATCAGAACTTTCGCACCACCAAGGATGACTTGTTGCAGCAAATATCTAAGGTGGATAGAGAGATGGCGCTGTCGGAGACGACACTAGCGAAGCTGAAGAAGAAGCAAGAAGAGTTAGAGCAGTCAGCTTCGAAACCGGCAGCCGCTGCGGAGCCCGAGGAAGCCCCGCCCCGGCACCGTTCCCTCGCCCAGTGCATCTATGCCGATAATAGAAAACGGGCGGCCGCAGGTCACGCGGCATTGGCACACCTCGGTCCGGCGGTGACGTACCCGTTGTACAATCAGCCGCAGGACACGCTCGTCTATCATGAAAACATAAGGCGACATAAAACCTTCCGGAGACGATTATCTTTGCATCTGAACAATTTGAGAGTGGAGGCTGAGAAGAGAGAAGATGCCTTAGCGGAAGCATATAGCCGCCGCGCAACAGAGTGGTTGCGACGAGTAGAACGCATTGAACAAGGACAGAAAAGAAAAGTAAAAGACGCAAGGAATAGGGAGTTCTTTGAAAAGGTGTTCCCGGAGCTACGAAAACAGCGGGAAGAGCGCGAGCGGTTGTTAAGACTGGGAGCCAGAGTCAAGTCTGAGGCGGAGTTAGAAGAAATCGCAGACGGGCTACACGAGCAGGAACACGAAGACAAGAAGATGCGGTCCTTAACCGTTGTACCGCCGTTATTACGAGATCCAAGCCTGCCCCGGTTACCCGTCGATGTAAACCAGCGTAAAATCGACATGGAGACTGAACATAAGGAGCTCCAACTGCGGAATGTATGGTCCCCAGTCGAAAAGGACCTCTTCAGAGACAAATTTCTACAGCATCCTAAAAACTTTGGGCAGATCTCCTCCTTCCTACCCCGCAAGACCGTTCGGGATTGCGTTAGATTCTACTACCTATCCAAGAAGGCAGAGAATTACAAGCAGTTACTTCGTAAGCCACGTCCAAGAAGACACGCGAGGCCTCGGCCGCCACCCGAGCCAGAACTGGTCCATGCTTCCAGTGGGGTTACAACGCGTCTTCAACGATCTCAGGGAACTAGGGTAGCTGATAAGGACACCGCCAATCTGGAAGAAGCAGTTGTGGCCGATATCAATGGCATCCCTATGCCTCCCCACGCTCCCCCATCGGCGCATCCCTCCAGGTCGGAACTTAGTCGGACGCCTCCCTTGCCACCGTCACCCCCGCCGGCGTCGTCGGCTCCACCAGCCGTCAGCATCGGGCTGACGACGCCGTTGCCTTCGCTGGAGCAGTCATCCACAACTCCAAGCCTGATGGGGGCGGACGGCGAGGCTGGGCAAAGCGAGTCAGTGTGTGTCAGCGCCATCAGCTTGCCCCCTGGCAGCCCCACGGCTCCCGAACCCACGCCGCCGCCTGCCGACGCCGTCCTACCAACGGGAGACACCACATCTGTTATTACGACCACGTCGAGTCAAGTGGCCAGCATAAGCGTGTCCGGTGGCGCAAACGCCGGTGGCAGCCAACCGCCTACTCCGCAGCCCGCAACACCAACGCCACAGCCAACACCGCCTACGTCACAGCCTAATCCGCCCACACCGCAGCCCGCGGCAACACCGACGCATCCACCGCCCACGCCCGAGCCAGCAGTAACAGAACGGACCAACAGCCCTGTTGGGACGGCGGGAAATGCAGGGCCGTGCGCCGTGTGTTCGACAGGCAATGGTACGCGATCAGTACCGGCGAGCAATGCTGCGCAATATGGTCTCGAGGCGGGTACAGCGGGCCATCGGGTTTGCGAGGCCTGCCATTGTCGCGTTTTGCGAGCGAGTCGCTCCCGGTGTCCGGTGCGTTCCTGCGCCGGCCCACGCGCCCAACGCCTACGACATCTACCGCCCGCGTGGCACGATCTACAGCTGAACGACAAGAAACCTATTATGGACGAGTTCAAAATTCCAAGTACACTAAGCAAATGCTGCCTAACGTGCTTCAAGCGGATAACGCGGCGGTTAGAGGCGGCGGGAGTTACCTCCGGTGAGCCGTCCGAGGAAGAGGCGTCTCGGTTTCGGGCCTTGCTGCGCGACTGCGGCACGGCCTGGGATCGAATGGCGGCCACGAGCGGTCGCAGCGCCGCAAGCCTCAAGGCCTTTTACTTCACCTACCGCCGCCGTCTACGTCTCGACGCCGGTTCACCTCGAGCGCGAAGCGGTTCTGATGATAGCGGCAGCTCGGGGGACACAGACACAGCCAGTGCGGGGTCACCGCGGCCTCCACCATTACCCGGCCCGCGGACTGACGCCGCCGCACCGCGACGACCCAAACGAGACGAGTATGACTCCTCCGCCACTGAGACGGCTGACGAAGAGAACGACGCGCCCAGCGCTAAGACTGCTGCCAGCGGGGTGAGTGCGGTGAGTACAGCGAGTGCGGTCAGCGTTGCGACCGCTGTTAGCGGGGTGAACGCAGTGAGCGGCGTCAGCGTTTCTACCTCCAGCCCTTGTGTCAGTGCACAGCTAACCGTACGTGATGTCGTGCTAAACATGATCGAGGTCAGCCTCATGAAAAACAGCCGGCCGCCGCAACATCCACTCCCTCCTAAGCAACAGCAGCAGCCGCAACAAAACCACGAGCTGGCGACTCTGACGGTGGTGAGTGGTGGGCAGCACTCAAACGCAGTTTCCCCCCGGGGGGCCACGCCGCTACCCGCTGAAGGAGCGCCCGACCTCGTGCTGCTGCAGGTGGACCGACCAGCTCCTTCCCAACCGGATTCCCTACTAGACCTCACCGTCAAGCGGCCGCGTCTAGACCGACATCCGCCGCCCTCGCCTTACCGAACAGCTGATTATGCTGCGGGATACCGGGCAGCGGAGCGACAATCGCCGACGCAGTACGCGGTAAACAAACCCAAGCCGGCGGCGTCCCCGCGGCCCGCCCTCAAACTTCCTAACCCCAAGGGGTCTATAACGTTAGGCACGCCTGTCGAAAGCCGCTTCGAGGCGCAACGTACTCCGCCCGACCCCAAGACGGGCTCCATCACGGCCGGCACGCCACTCGCCCCTCTACACCATCTCCCAGACAAACGCTACTTTGACCGCCGTCGCAGTCCGGGAGGCGGCTACTATGCCCGCCCGCAGTCGCCGCAGTCCTTTACAACGCCACCTAACGCCGCCACCTCCCGTGGACCGTATGGGCTGGAGCGACGGCAGATAATGCTGACGGACTTCATCACCTCCCAGCAAATGCACCCAGCGGCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGATCGCGACACGGTGTCCGTGATTCAGAGGCATTCGCACACCTACTCGCATCCCGTACCGCCACCCGGTCATGAGGCATTCACTTCGCTGGTAAATGCGGCATCGGCAGCAGCTGCTTTGCCTGTACCCCGGACCCGAGAGCCTGACCCCGACAGCCACCACCATCACCATCCCCAACACCAGCAGCATCAACAACATCAGCAGCACTCACATCATGATATCAGAAGCAGTAGAGAGTTCCCGTTGAGTGGAAAGTACGCAAGTGGAGGCCCCGGGGGCCCCGCGTCGGGCTACGACGAGCGCAGGCCGTATGACCGTGCGCCGCCTGCCAGAGACAGTCGTGAACGGCTGGTGTCATTGGGAGGGAGACGGTACGTTGTCGATGATCGCCATCTACACGAGCATCATCACCAGCAGGTTGTATCGAGCCAGGAAGAAGCCAAGCGGTTCAGCAACAACGCAGCCTACAGCATCGCTGGCAAACCGCGACCGCACGGGCTCGAAAGGAAGGATGCTCGCGGTCCCGCAGTGAGTTGCCCGTCGACGGTGAGCAGTTCGAGCGGGCCCCCGGCTCTATCCGCCCCTGCCCCGGGGGCCCAGGCCGCGGGGGACAGGGCGCGAGGCACGGACGGCACCCTGACAGCGGCTTCTCTCATCAACGCCATCATTACCCATCAGATTAGCCAGACTACGGATCAGAGGTTCCCGAACTTGATACGTGAAAACGATTCTGGACCTCAGGGAGAACGTGTCCCTGGCCCCGGGGAGCGGGTTGTCGTGGGTCAAGAGAGGGGCCCCGAACGACGCGACGAACCACCAGTCAGCGCTGCGCATACTACGAGCATTAAACTGGGAGACCTGGCCTCTAATATTATCGTCCGCGACTTCAGCAGTCCAAACCCCGCCACCCTTATGCATCATAATAACAGGTTAGTTTCCAACGTGGAACCCTATCAGGGTAGCGGAGGAACGAGCGTTTCGAGTGGAAGCGGGAGCGGAGCAGGTCCGGCCACCAGCGGACATTCTTACTTTGAACCCGTTTCACCGACTGATAATCAACCCACTAGCCGCAGTGATAACCGTTACACGAGTGGCTCGAGTAGCGTGAGCGGAGTGAGTGGCGTGAGCGGGGTGAGCGGGGTGCGTTGCGGAGTTTTAACGGCGTATGACTATGTGACGGCGCGTATCGTGGACGTCATGAGAAACGACTCCGAGGCTAAGCAGCTACCCTTCACAGCCGAAACCAAGTTACCCTTCAACACGCCTTACACCTACCCTTACTCCGCGCTCAATGTCGCCACACCCGCTGATCCGAGCGGGGGTCCAGGCGTAGTGTCGAGTGCGCCCCCTCCCGCGGGCCCCGCCCCTCCGGAGCCCGCGCCCCTTATGTCGGCGCAGTACGAGCCCCTCTCCGACGAGGACTGA
- Protein Sequence
- MVWSAPSGEVLIDIISRPGQNEHGHGALAYGGKQVGVAQARPAAPYAPNYAPAQLRLHQASYGSAPLYSYGRAGGEYRAGARMSLLGSAYLPPPAPPAHHPPPADPPPFKKIRLAADHHPQQLRVDTREPVMNSYSTVEVLSPNPPSEPTIEDQNFRTTKDDLLQQISKVDREMALSETTLAKLKKKQEELEQSASKPAAAAEPEEAPPRHRSLAQCIYADNRKRAAAGHAALAHLGPAVTYPLYNQPQDTLVYHENIRRHKTFRRRLSLHLNNLRVEAEKREDALAEAYSRRATEWLRRVERIEQGQKRKVKDARNREFFEKVFPELRKQREERERLLRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPSLPRLPVDVNQRKIDMETEHKELQLRNVWSPVEKDLFRDKFLQHPKNFGQISSFLPRKTVRDCVRFYYLSKKAENYKQLLRKPRPRRHARPRPPPEPELVHASSGVTTRLQRSQGTRVADKDTANLEEAVVADINGIPMPPHAPPSAHPSRSELSRTPPLPPSPPPASSAPPAVSIGLTTPLPSLEQSSTTPSLMGADGEAGQSESVCVSAISLPPGSPTAPEPTPPPADAVLPTGDTTSVITTTSSQVASISVSGGANAGGSQPPTPQPATPTPQPTPPTSQPNPPTPQPAATPTHPPPTPEPAVTERTNSPVGTAGNAGPCAVCSTGNGTRSVPASNAAQYGLEAGTAGHRVCEACHCRVLRASRSRCPVRSCAGPRAQRLRHLPPAWHDLQLNDKKPIMDEFKIPSTLSKCCLTCFKRITRRLEAAGVTSGEPSEEEASRFRALLRDCGTAWDRMAATSGRSAASLKAFYFTYRRRLRLDAGSPRARSGSDDSGSSGDTDTASAGSPRPPPLPGPRTDAAAPRRPKRDEYDSSATETADEENDAPSAKTAASGVSAVSTASAVSVATAVSGVNAVSGVSVSTSSPCVSAQLTVRDVVLNMIEVSLMKNSRPPQHPLPPKQQQQPQQNHELATLTVVSGGQHSNAVSPRGATPLPAEGAPDLVLLQVDRPAPSQPDSLLDLTVKRPRLDRHPPPSPYRTADYAAGYRAAERQSPTQYAVNKPKPAASPRPALKLPNPKGSITLGTPVESRFEAQRTPPDPKTGSITAGTPLAPLHHLPDKRYFDRRRSPGGGYYARPQSPQSFTTPPNAATSRGPYGLERRQIMLTDFITSQQMHPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRDTVSVIQRHSHTYSHPVPPPGHEAFTSLVNAASAAAALPVPRTREPDPDSHHHHHPQHQQHQQHQQHSHHDIRSSREFPLSGKYASGGPGGPASGYDERRPYDRAPPARDSRERLVSLGGRRYVVDDRHLHEHHHQQVVSSQEEAKRFSNNAAYSIAGKPRPHGLERKDARGPAVSCPSTVSSSSGPPALSAPAPGAQAAGDRARGTDGTLTAASLINAIITHQISQTTDQRFPNLIRENDSGPQGERVPGPGERVVVGQERGPERRDEPPVSAAHTTSIKLGDLASNIIVRDFSSPNPATLMHHNNRLVSNVEPYQGSGGTSVSSGSGSGAGPATSGHSYFEPVSPTDNQPTSRSDNRYTSGSSSVSGVSGVSGVSGVRCGVLTAYDYVTARIVDVMRNDSEAKQLPFTAETKLPFNTPYTYPYSALNVATPADPSGGPGVVSSAPPPAGPAPPEPAPLMSAQYEPLSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01202420; iTF_01205653;
- 90% Identity
- iTF_01202420;
- 80% Identity
- -