Prap008125.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- RCOR3
- Assembly
- GCA_905147795.1
- Location
- LR990588.1:8368165-8380102[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-10 1.1e-06 28.9 0.0 3 46 132 175 130 175 0.97 2 2 6.7e-12 8.5e-09 35.6 0.0 3 46 370 413 368 413 0.96
Sequence Information
- Coding Sequence
- ATGGTGTTAGCTGAAAGAAGTAACGATGTTCGTAATGGGAAGCGTTCCAGAGGACCAAGCCCTAATGGGCATGGAAGCCCAGATTCAAGCTCCGAAGATGAAAATGTAGTGCCATTTGCAGCTGAGAAAATCAGAGTAGGCCGTGACTTCCAAGCTGTGTGCCCTGAGTTGGAGCCAGTTGAGCAAAGGAAACCAGACCAAATATCAGACCGGGCATTACTTGTTTGGTCTCCAACAGCTGACATATCTGATACCAAGTTGGATGAGTACATAACAACAGCAAAGGAAAAGTATGGATATAATGGTGAACAGGCCTTGGGTATGCTGTTTTGGCATAAGCATGATCTCAGTAGGGCATCTATGGACTTGGCTAACTTTACACCTTTTCCTGATGAATGGACAGTTGAAGATAAGGTGCTGTTTGAGCAAGCATTCCAGTTTCATGGAAAGAGTTTTCATCGTATACGACAGATGCTGCCAGATAAGTCAATAGCGTCACTGGTGAAATATTATTACTCATGGAAGAAAACGCGCGCTAGAACTTCATTAATGGATGTAGTCAGTGAAGGCCGTAACGCTTCAGCTTCTGGTACAGCTAAGAAGGATTCTCCAGCTGCTTCCGAACCAGGTGGTTCAGACAAGGATTCAGACAATGATGAAAAGGGCGACGGCGGTGAGGCAGGCAAATGGTGCACAGTGTGCGGGATACTATGCACCCAGACAACGCAACACAACTCCCAGAAACTTTGCCAGGCATGCCTCGTGCACGCCAGACGCACGGGCAGTATGCGACCGCTGTGTGGGCCGAGCGGGCGACGCGGGCCCGGCTTTAAACAGGTGCGGTACAAGCATCGCTTGCCTCGTGGTATTTACATCAACCACGATGATCTGGTTGCCATGGCGACCGGCCCTCAGCCCGGGGACGCCGCCCAACCGGGGCTCGTAAACCAGGGCGAAGCTATGCTCAAAGCGATGGATAGAGAAATTATATCCTACAAACGACAAGTTCAGCAAAATAAGCAACAGTTAAGCGCGATAAAACGTAAAGTTGGCGATTTGGGAGTGGAGGAATACAGGCCTGGTGAACCACCGGCTAAGATTAACTCTCGTTGGACCAATGAGGAGTTGCTAATGGCTGTAACAGCTGTGCGGAAATATGGTAAAGACTTCCAAGCCATTGCTGAAACGCTAGGTACCAAAACAGAGGCCCATGTGCGCACATTCTTCGTTTCATATAGACGTCGTTACAATCTGGATGCTGTACTGCGGGAACACGAAGCTGACCGCGGAAATGCTAATCATATACAGCCAGGTACCACAAGCACAGAAGCAGCCGAGAATAATGAGAGTAACGCTAATGGAAGTAGCAGTTCGGTTAAGACCTCTGCTAGTAAGGATGAAAAAACGGAAGTGGACAGCGAGGGTGTCTCCATCGGCGCATCAGCAGAGCAGGGCGGGGCGCCCACCACGCCCCCCAAACAAAAAACTAGCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDFQAVCPELEPVEQRKPDQISDRALLVWSPTADISDTKLDEYITTAKEKYGYNGEQALGMLFWHKHDLSRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNASASGTAKKDSPAASEPGGSDKDSDNDEKGDGGEAGKWCTVCGILCTQTTQHNSQKLCQACLVHARRTGSMRPLCGPSGRRGPGFKQVRYKHRLPRGIYINHDDLVAMATGPQPGDAAQPGLVNQGEAMLKAMDREIISYKRQVQQNKQQLSAIKRKVGDLGVEEYRPGEPPAKINSRWTNEELLMAVTAVRKYGKDFQAIAETLGTKTEAHVRTFFVSYRRRYNLDAVLREHEADRGNANHIQPGTTSTEAAENNESNANGSSSSVKTSASKDEKTEVDSEGVSIGASAEQGGAPTTPPKQKTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01202421;
- 90% Identity
- iTF_01203989;
- 80% Identity
- -