Prap019302.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pieris rapae
Gene Symbol
ct
Assembly
GCA_905147795.1
Location
LR990596.1:707347-724697[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.3e-27 3.3e-23 81.7 0.0 3 70 159 227 157 233 0.94
2 3 2.6e-32 2.7e-28 98.0 0.0 4 77 557 631 555 633 0.96
3 3 4.7e-31 4.8e-27 93.9 0.0 3 75 751 824 749 828 0.95

Sequence Information

Coding Sequence
ATGCTCCGATTCTCGGAGCTAGGTCCAGAGCGTCCCCACATAATACCACCACCTAAAGACATTTTTGGAAGCCAGAATCATTTACTACGTTCCATGGACATAGCGGAACGAGAAAGGAAAATGGAGCCTCTCCGCTCTCCCGCGCAACCCATGCGAGAAGAAAGAAACTCCACAGAACGAGAACGGAGTTCGGAGCGAAGAGATACAGGTGCCGAAGACTGGCCGTCCACGCCGCCCCCGCTCAACAACAACACGACACACCACAACAACAATGGCCCACTCCCTCTACCGCTGCCGCCGCCGAGCCCTTTCCGCTTCGACGAACACAGGCCCTACCGCTTCGCAGACGACATGGGCCCGCTACCACCAGGCGCTCTCGTCGGCCGCCTAGGAGACTCTCTCATCCCCAAAGGCGATCCCATGGAGGCCCGTCTCCAAGAAATGCTCAGATACAACATGGACAAATACGCCAACTCGAACCTTGACACGCTGCACATAAGCAGACGAGTGCGAGAGCTCCTCTCGGTGCACAATATTGGCCAGAGGCTCTTCGCGAAATATGTGCTGGGACTCTCTCAAGGGACCGTGTCAGAGCTGCTGTCGAAACCGAAGCCATGGGATAAATTAACAGAGAAAGGCCGGGATTCCTACAGGAAAATGCACGCGTGGGCCTGCGATGAAGCCGCCATCATGCTCCTGAAGTCACTAATTCCCAAAAAAGTAGGAACGAAAGATGGCACAGCAGGTGCTGGTTTCGGGAGATCAGATGGTGAAGGTGACGAAAGACTGGCACATATCCTTACAGAGGCATCCCACATGATAAAAACTCCAACCGGACAGCCTAATAATGATGACTCCAGCACACTGATGAGTAACGAAGACTCCAGTTCTCCACGAACTCAGTGCCCCTCTCCTTTCTCTAATAAGGATTCAAGTCAAAACAGAAGGCTGAAGAAATACGAAAACGATGACATTCCTCAAGAGAAAGTAGTCCGCATTTACCAAGAAGAACTCGCCAAGATTATGACGAGGCGAGGAGAGGATATGCGGCACAACCGAGAAGGGTTCCCTGGAATGTTTCCTCCCTTTTTTAGCGGCGGCATGCCACCCCAGATAGAGCGGCCCCCCGAAGACATCCGTATGGCTCTCGAAGCTTATCACCGAGAACTCGCCAAGATCCAGGGAGGAAATATTCCCCTCCACAACCTTCCAGGAATACCCCCCTTCCCGAACCTCATAGCCCTCCAGCAGTTGCAGGCCCAGACGCACATCAACGGATCCGGTGCCGTCCAGGACCTGTCGCTGCCAAAAGACAAAAATGCCAAAATTAATGGAATGACTGATAGTGATAAGGATAAAATGGATGCAGAGGAGGCCATAAGGCACGCAGGAAGCGCCTTCTCCCTGGTTAGGCCTAAATTAGAACCGGGACAACAGTCCACCGGCTCTTCGGCGTCGAGCCCGCTCGGTAACGCCATACTTCCACCCGCGATAACCCCCAACGAAGACTTCAACAGCTCAGCGGCAGCCAGTCCTCTGCAGAGGATGGCTTCCATCACAAACAGTCTGATCTCGCAACCCCCGAACCCCCCGCACCATGCGCCTCCCCAGCGGTCTATGAAAGCGGTTCTGCCTCCGATCACGCAGCAGCAGTTCGATCTCTTCAACAACCTAAACACTGAAGATATAGTGAAAAGAGTGAAGGAGGCGTTAAGCCAATACTCCATAAGCCAAAGGTTGTTCGGGGAGTCCGTCTTGGGGCTGTCGCAAGGCTCAGTCAGTGACCTGTTGGCGCGGCCGAAGCCCTGGCACATGTTGACTCAAAAAGGACGAGAGCCTTTCATCCGAATGAAGATGTTCTTGGAGGACGACAACGCCGTACACAAGCTGGTTGCGTCGCAGTACAAGATTGCGCCGGAAAAGCTCATGAGGACTGGAAACTATAGCGGAGCACCCGTCTGTCCGCCGAACATGAGCAAGCCGATGCCACCAACCCAGAAGATGATCTCTGACGCGACTTCCCTTCTGAGCAAGATGCAACACGAGCAGCTTCTGGGGCCCCACATGCCCCATCTACCCCCGGGACCTCTTCTGCTGACACCGCCTGGTTTTCCTCCGCACCATGCCGTGACGTTGCCCCCGCAACACCACGAAAACAAGGAGAGGAAGCCCCCGCCGCCGCCCCAGCACCAGATGAGGGCGCTGCACCAGCACATGTCGCCCAGCGTCTACGAGATGGCAGCTCTCACGCAGGACCTTGACACGCAAACTATCACCACAAAGATCAAAGAGGCCCTCCTCGCCAACAACATAGGCCAGAAAATCTTCGGCGAAGCGGTGTTAGGTCTGTCCCAAGGATCCGTCAGCGAACTCCTGTCTAAACCGAAGCCTTGGCACATGCTGAGTATAAAGGGACGGGAACCCTTCATCAGGATGCAGCTGTGGCTCAGCGATGCGCACAATATCGACAGACTGCAAGCCCTTAAGAACGAGAGACGGGAAGCCAACAAGAGAAGACGATCGAGTGGGCCAGGGCAAGACAACTCCTCGGACACGTCTTCCAATGACACGTCGGAGTTTTATCACTCCAGCTCTCCGGGTCCAACGTCGGGCGTTCCCTCCGCAAAGAAACAACGAGTTCTGTTCTCTGAGGAACAAAAGGAGGCTTTGAGGCTCGCGTTCGCTCTCGATCCTTACCCCAACATGCCGACGATAGAGTTTCTGGCGGCAGAGTTGGGACTCTCCACTAGAACAATAACAAATTGGTTCCACAATCATCGAATGCGCTTAAAGCAACAGGCGCCCCACGGTCTTCCAGCGGAGCCCCCAGCGAGGGATCAGTCTTCCGCGCCCTTCGATCCAGTACAATTTAGGCTCCTCCTGAACCAGAGACTGCTCGAGCTCCAGAAGGAGAGGATGGGTCTGGCGGGAGTTCCCCTTCCGTATCCTCCGTACTTCGCGGCGAATTCGAACTTCGCAGCGTTAATCGGGAGAGGTCTGCTGCCGCCCGAGGACCACAAGGACACGACGAGCGGTCTCGACCTGTCGATGCCGCTCAAACGCGAACCGGACGCGGACGACTTCGAAGACGACGACCTCGAGAGCAATCTGGGTTCGGAGGACTCTCTGGATGACGAGTCGAAAAATGAGCCAAAGGCGACGTCGACACCGGCGCGGTCGAGTCGGAGAAAGCCTGCCGCGCCGCAGTGGGTCAACCCCGACTGGCAAGACGAGAAGCCCCGGAACCCGGACGAAGTCATCATCAACGGCGTCTGCGTCATGCGCAGCGACGACTTCAGACGGGAGGCGGAGGAGACGGTCCGCATAGAGCCTTCGCCCGCCCCGAGAGAGAACACGTCCCCCTCCCTCGCCCCGGCCCCCTCGCCCCTCACGAGGGAGTCCCCGGAAGTGCTTCCGGAGGACAAGATAAAAACTGAAACAGAGGACGATCGGTGGGAGTACTAG
Protein Sequence
MLRFSELGPERPHIIPPPKDIFGSQNHLLRSMDIAERERKMEPLRSPAQPMREERNSTERERSSERRDTGAEDWPSTPPPLNNNTTHHNNNGPLPLPLPPPSPFRFDEHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTAGAGFGRSDGEGDERLAHILTEASHMIKTPTGQPNNDDSSTLMSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRGEDMRHNREGFPGMFPPFFSGGMPPQIERPPEDIRMALEAYHRELAKIQGGNIPLHNLPGIPPFPNLIALQQLQAQTHINGSGAVQDLSLPKDKNAKINGMTDSDKDKMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFNSSAAASPLQRMASITNSLISQPPNPPHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPVCPPNMSKPMPPTQKMISDATSLLSKMQHEQLLGPHMPHLPPGPLLLTPPGFPPHHAVTLPPQHHENKERKPPPPPQHQMRALHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLPPEDHKDTTSGLDLSMPLKREPDADDFEDDDLESNLGSEDSLDDESKNEPKATSTPARSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRIEPSPAPRENTSPSLAPAPSPLTRESPEVLPEDKIKTETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01203832;
80% Identity
iTF_01206453;