Prap011121.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- kn
- Assembly
- GCA_905147795.1
- Location
- LR990591.1:1330586-1339257[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-119 4.3e-115 385.4 0.0 208 387 15 212 9 215 0.98 2 2 4.4e-08 0.00044 18.8 3.6 420 524 221 328 213 370 0.68
Sequence Information
- Coding Sequence
- ATGAGTGGTGCAGAGTTTATTGCCAGTTCTTTTCGTCCGTTCTACAAAGTGGTGATATCAACACAGGTGATGGTAGACGGCCCGCTATTAGCAATATCAGATAATATGTTTGTTCATAATAACAGCAAACACGGCCGTCGAGCGAAACGGCTAGACCCTACAGAAGGTACAGAAGCTGCAATCGAGCCTACTTCGGGTCTATATCCACCGTTGCCAGTAGCAACGCCATGCATCAAAGCAATATCTCCAAGTGAAGGATGGACATCGGGAGGTTCGACCGTTATCATAGTGGGCGACAATTTCTTCGATGGCCTTCAAGTAGTATTTGGTACTATGCTGGTGTGGAGTGAGTTGATAACATCACATGCGATTCGAGTACAGACACCGCCGAGGCATATCCCAGGTGTTGTAGAAGTAACGCTGTCATATAAGAGTAAACAGTTCTGTAAGGGTGCACCTGGAAGATTCGTTTATGTTTCAGCACTCAACGAGCCCACGATAGATTACGGCTTTCAGAGGCTTCAGAAACTTATACCGAGACATCCCGGCGATCCGGAGAAACTGCCAAAGGAAATAATTCTTAAACGGGCAGCGGACTTAGCAGAGGCATTGTATTCGATGCCCCGAAATAACCAATTAGGTCTGGGTGCGCCCAGGTCACCTCCTGCCAGTATGCCTTTCAACTCCTATACTGGCCAATTAGCTGTTAGTGTTCAGGATTCCGCTGCTTCCCAGTGGACAGACGAGGAGTACGCGCGTAGTGGCGGAGGTTCCGTATCGCCTCGGTACTGCTCGGCCGCGTCCACTCCGCACGCCTCTTACCCCCATCCACAGCATTACCCGGCACCGACCTCCATCTTCAACACCACATCACTGTCTCTGGGGCCATATCATCCGGCGAATATGAATGGACACTTAACTGACCAGTATAATACGTACCCAAAAGATAGCGATTACATTGAAAGAAACGTGGAGTCTAAAGATGACTGTCCCGCAAACACTCATACGAAATGCGATGCTATGAAAGGGCAAACGAAAGAGAAGAGAAGCGGGTTCGCGGTCGTAAGACAAAGAATGGGAGGCCTTGTATCATCACCGTTCAGCATGAATCCTTTCTCTCTCCCAACGTGCAACAACCAACAATATGCACAGACGGCTCCACTTGCATCTAAGTAA
- Protein Sequence
- MSGAEFIASSFRPFYKVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEAAIEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDSAASQWTDEEYARSGGGSVSPRYCSAASTPHASYPHPQHYPAPTSIFNTTSLSLGPYHPANMNGHLTDQYNTYPKDSDYIERNVESKDDCPANTHTKCDAMKGQTKEKRSGFAVVRQRMGGLVSSPFSMNPFSLPTCNNQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_01202981;
- 80% Identity
- -