Prap009932.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- JMJ18
- Assembly
- GCA_905147795.1
- Location
- LR990607.1:2272866-2274045[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 0.00011 22.6 0.0 7 51 123 167 118 170 0.89
Sequence Information
- Coding Sequence
- ATGTCTTCCTTCTCAAACGGTTTAGCCATGTCGGCAATTGCTGACAATTTGGCGGTGACTTGCGCCTGTTATCAAAGTCACTCTGGAGATTCAACTAGTGATGATGAAATTCCTATACGAAAGAAACAAAAGATGAGCATTTTGGATGCACCCGTGTTTCGACTTATGGTTGATGAATTTAAAGAACCACTCACATACATAGAGAAAATTTTACCAGAAGCGTCCAAATATGGCTTATGCAAAGTTATACCACCTGATGGATTCACACCACTCTGTAATCTTGATGGGTCCATGAACTTTAATGTTACAAACCAGTATGTCCAACGGATGTTCAAACGATATGGGCCAGCTGCTACCAAAAAGTTAAGCGCTTTCAAAGCCCTCTTGGCACCGCAAAAAGTGCCATTCAAGCGACCGCCATTAGTAAGCGGCTTGGAAGTGGACTTACCACATTTATTGAAGCTAGTGCAGCAAATGGGTGGCCGAAAGAAGTTAACAAAAATAGTACAGTAG
- Protein Sequence
- MSSFSNGLAMSAIADNLAVTCACYQSHSGDSTSDDEIPIRKKQKMSILDAPVFRLMVDEFKEPLTYIEKILPEASKYGLCKVIPPDGFTPLCNLDGSMNFNVTNQYVQRMFKRYGPAATKKLSAFKALLAPQKVPFKRPPLVSGLEVDLPHLLKLVQQMGGRKKLTKIVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206338; iTF_01206339; iTF_01206340; iTF_01206341; iTF_01206335; iTF_01206336;
- 90% Identity
- iTF_01206341;
- 80% Identity
- iTF_01206338; iTF_01206339; iTF_01206340;