Prap010043.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- JMJ18
- Assembly
- GCA_905147795.1
- Location
- LR990607.1:2285656-2287271[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-07 0.0001 22.8 0.0 7 51 113 157 108 160 0.89
Sequence Information
- Coding Sequence
- ATGGTGCCCACCGTGGCGAAACACACGTTAAAACAGATTGGGGTGAGTCCAATAAAAATTAAGGTCGTGATCGCCAGCATCACGGATGTTAAGAAACAAAAGATGAGCATTTTGGATGCACCCGTGTTTCGACTTATGGTTGATGAATTTAAAGAACCACTCACATACATAGAGAAAATTTTACCAGAAGCGTCCAAATATGGCTTATGCAAAGTTATACCACCTGATGGATTCACACCACTCTGTAATCTTGATGGGTCCATGAACTTTAATGTTACAAACCAGTATGTCCAACGGATGTTCAAACGATATGGGCCAGCTGCTACCAAAAAGTTAAGCGCTTTCAAAGCCCTCTTGGCACCGCAAAAAGTGCCATTCAAGCGACCGCCATTAGTAAGCGGCTTGGAAGTGGACTTACCACATTTATTGAAGCTAGTGCAGCAAATGGGTGGCCGAAAGAAGTTAACAAAAATAGTACAGTAG
- Protein Sequence
- MVPTVAKHTLKQIGVSPIKIKVVIASITDVKKQKMSILDAPVFRLMVDEFKEPLTYIEKILPEASKYGLCKVIPPDGFTPLCNLDGSMNFNVTNQYVQRMFKRYGPAATKKLSAFKALLAPQKVPFKRPPLVSGLEVDLPHLLKLVQQMGGRKKLTKIVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206332;
- 90% Identity
- -
- 80% Identity
- -