Prap012771.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- -
- Assembly
- GCA_905147795.1
- Location
- LR990593.1:5687493-5691159[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.041 25 5.5 0.0 44 85 100 141 88 143 0.75 2 4 0.0088 5.4 7.6 0.2 52 86 202 235 172 236 0.86 3 4 0.032 19 5.9 0.1 49 83 290 323 277 325 0.82 4 4 0.024 15 6.3 0.0 49 83 390 423 386 426 0.82
Sequence Information
- Coding Sequence
- ATGGACGCGGCTAATACACACAACCAAAACTATTGGTTTGTCGTTCGTGAAGACCATAGAAATGTTATATTTTCGAGTAATAATTTTACCATTCCAAATCCACAAAGCCAAGAGGCAAGGTTTATAGTGGATGCAGGTGTACATAGTGATAATAGACAATATGTGCAAGTACAAGACAATATACAACCAGTTCTTCAGGAAGAAACTGCTAAAGAAATTAAAGAAACAGCTTCCATAAGAGATGATATCTTTTGGGACAGAAATAAAGTTCAGTTACTTTTAACCCTATGTCTTCAAAATGGATACAACCCCTCAACAATAGAACAGATTGAGTGGGCAGAGATAGCTGCCTTATTGGGAACTACACCAGAAGAATGTGACAAGAAGTTCAGAGGCCTTCGACGAATCTATCTTAGATTAATGAAAAAGAAAAATTTAGGCAAAGATATTAAATGGAAATATTTTAATATTTGTGAAGAGTTTTTTAAAGATTGTAAACTGTCTTTTACTGTATTAGAACCATGGGAAGATTCTAAAATTAGACAATTGTTAAGTATCTATATTGAAAATATCAATAAATTTAGAGACCCAAATTATTTGCATAAAGATGTCTGGAAAGAAATTGCTGCTCGGTTGCAAACAACAGAATATAATTGTTATCATAAATTCAAAAGTTTAAAAAGAACTTATTTAAATTGGCTTCAAAGAAGTAGGGAAACTGGGAAATTAATAAAATGGACTTATCATCAGTATTTTGAAAGGATATATTACAATTATAATCCAGATTTGGGGCCATGGGATAGAAATAAAATAAGATTACTTATAAATGCATATGCAGAAATAGCACACATGTTTAAGAATCCTAAATATCAAAAAAAAGAGTTGTGGCGGGAAATTTCAAGAAAAGTGGGTGAAAGCCCGAGCAGCTGTGACAGAAAGTTTAGAAACTTAAAACAAACATATTTAAGGCTTAAAATGAGGGTTGATACAGGTAGATCAGTTACAAAATGGAAATACTATAAAGAATTCTCAACAATTTTTGAAAATGAAGCATATTCTGTTACCAATGATGGTCAGCAAATTTTATACAGGGTAGGTGAGCAGGATTATGTAAAAGAACTTCTTAACTTTTACCTTGATAATAAAGAAAAGTTTTGGGATCCTCTGGTAAAAAAAAAACCTCTGTGGAGAACTATAGCATCAAAAATAGGTTTAACTGCTGGAGAATGTGATAAAAAATTTAGAAATCTAAAACAAACTTATTTACGAATGGCTGAAAGAAAGCAAATCAGTGGAAAAACTAGCACATGGCCCTACTATTCATACTTTGAAAAAATTTATGATCAACCAAAATTAATTAAGAAAGAATGCAAACATGCATGTATGGATAATGTTACACTAAAAGAAATTACCAGTATTGTAAAAGATGTTCATGAAATAAAAGGGAAAGATAAATTTGAGCGACTAGTAAAGGTTATAGAGGATTCAAATAATATTCAGAGGGAACGAAACCGAATCTTACAAGCACTACTAGATAGGAAATAA
- Protein Sequence
- MDAANTHNQNYWFVVREDHRNVIFSSNNFTIPNPQSQEARFIVDAGVHSDNRQYVQVQDNIQPVLQEETAKEIKETASIRDDIFWDRNKVQLLLTLCLQNGYNPSTIEQIEWAEIAALLGTTPEECDKKFRGLRRIYLRLMKKKNLGKDIKWKYFNICEEFFKDCKLSFTVLEPWEDSKIRQLLSIYIENINKFRDPNYLHKDVWKEIAARLQTTEYNCYHKFKSLKRTYLNWLQRSRETGKLIKWTYHQYFERIYYNYNPDLGPWDRNKIRLLINAYAEIAHMFKNPKYQKKELWREISRKVGESPSSCDRKFRNLKQTYLRLKMRVDTGRSVTKWKYYKEFSTIFENEAYSVTNDGQQILYRVGEQDYVKELLNFYLDNKEKFWDPLVKKKPLWRTIASKIGLTAGECDKKFRNLKQTYLRMAERKQISGKTSTWPYYSYFEKIYDQPKLIKKECKHACMDNVTLKEITSIVKDVHEIKGKDKFERLVKVIEDSNNIQRERNRILQALLDRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770888;
- 90% Identity
- iTF_01205489;
- 80% Identity
- -